BLASTX nr result

ID: Coptis24_contig00020267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020267
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281433.1| PREDICTED: uncharacterized protein LOC100245...   284   2e-74
emb|CAN67325.1| hypothetical protein VITISV_012830 [Vitis vinifera]   284   2e-74
ref|XP_004169610.1| PREDICTED: uncharacterized LOC101205220 [Cuc...   273   4e-71
ref|XP_004149057.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   267   2e-69
ref|NP_001234635.1| auxin-regulated protein [Solanum lycopersicu...   266   4e-69

>ref|XP_002281433.1| PREDICTED: uncharacterized protein LOC100245073 [Vitis vinifera]
           gi|297746132|emb|CBI16188.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  284 bits (727), Expect = 2e-74
 Identities = 167/307 (54%), Positives = 201/307 (65%), Gaps = 32/307 (10%)
 Frame = +1

Query: 130 AVVSSKGRKEFELPNKYKER----------------KVAVVYYLSRNGHLEHPHFMEVPL 261
           A  +S+ R E +LP K+KER                KV+VVYYLSRNG LEHPHFMEVPL
Sbjct: 2   AATTSRARAELQLPKKWKERETSPERTKVWTEPNRRKVSVVYYLSRNGQLEHPHFMEVPL 61

Query: 262 VSPEGLYLRDVINRLNILRGKGIATMYSWSSKRTYKNGYVWHDLSENDFIYPTHGCEYVL 441
            S +GL+LRDVINRLN+LRG G+A MY WS+KR+YKNG+VWHDL+ENDFIYP HG EYVL
Sbjct: 62  SSSDGLFLRDVINRLNVLRGNGMAGMYCWSAKRSYKNGFVWHDLAENDFIYPAHGQEYVL 121

Query: 442 KGSELLERSLSFRXXXXXXXXXXXXXXXXXXQNNTRNSDFP-MVRRRNQSWSSIDLHEYK 618
           KGSELLE S                        ++ +SDFP +VRRRNQSWSSIDLHEYK
Sbjct: 122 KGSELLEGS---PKPKSNETMSSSFRKPPETHKSSDDSDFPVVVRRRNQSWSSIDLHEYK 178

Query: 619 VVYKADSSGEALGK-AADASTQTEDKRRRRRTVED-------------PNTTTELSREEI 756
            VYKA+S+GE+ GK AADASTQT+DKRRRRR + +              N +TELSREEI
Sbjct: 179 -VYKAESTGESTGKAAADASTQTDDKRRRRRMIREEEIEPKTEEQEPYQNHSTELSREEI 237

Query: 757 XXXXXXXXXETLETLMKVDDSVINNNITTSTDESADIRNQMGKNHPS-GRSKASAMLMQL 933
                    ETLE+LMK D  +I      + D++A + N      PS GR KAS++LMQL
Sbjct: 238 SPPPSDSSPETLESLMKADGRLILGAGGGNQDQTASMSN------PSVGRMKASSVLMQL 291

Query: 934 ISCGSIT 954
           ISCGS++
Sbjct: 292 ISCGSMS 298


>emb|CAN67325.1| hypothetical protein VITISV_012830 [Vitis vinifera]
          Length = 942

 Score =  284 bits (727), Expect = 2e-74
 Identities = 167/307 (54%), Positives = 201/307 (65%), Gaps = 32/307 (10%)
 Frame = +1

Query: 130 AVVSSKGRKEFELPNKYKER----------------KVAVVYYLSRNGHLEHPHFMEVPL 261
           A  +S+ R E +LP K+KER                KV+VVYYLSRNG LEHPHFMEVPL
Sbjct: 2   AATTSRARAELQLPKKWKERETSPERTKVWTEPNRRKVSVVYYLSRNGQLEHPHFMEVPL 61

Query: 262 VSPEGLYLRDVINRLNILRGKGIATMYSWSSKRTYKNGYVWHDLSENDFIYPTHGCEYVL 441
            S +GL+LRDVINRLN+LRG G+A MY WS+KR+YKNG+VWHDL+ENDFIYP HG EYVL
Sbjct: 62  SSSDGLFLRDVINRLNVLRGNGMAGMYCWSAKRSYKNGFVWHDLAENDFIYPAHGQEYVL 121

Query: 442 KGSELLERSLSFRXXXXXXXXXXXXXXXXXXQNNTRNSDFP-MVRRRNQSWSSIDLHEYK 618
           KGSELLE S                        ++ +SDFP +VRRRNQSWSSIDLHEYK
Sbjct: 122 KGSELLEGS---PKPKSNETMSSSFRKPPETHKSSDDSDFPVVVRRRNQSWSSIDLHEYK 178

Query: 619 VVYKADSSGEALGK-AADASTQTEDKRRRRRTVED-------------PNTTTELSREEI 756
            VYKA+S+GE+ GK AADASTQT+DKRRRRR + +              N +TELSREEI
Sbjct: 179 -VYKAESTGESTGKAAADASTQTDDKRRRRRMIREEEIEPKTEEQEPYQNHSTELSREEI 237

Query: 757 XXXXXXXXXETLETLMKVDDSVINNNITTSTDESADIRNQMGKNHPS-GRSKASAMLMQL 933
                    ETLE+LMK D  +I      + D++A + N      PS GR KAS++LMQL
Sbjct: 238 SPPPSDSSPETLESLMKADGRLILGAGGGNQDQTASMSN------PSVGRMKASSVLMQL 291

Query: 934 ISCGSIT 954
           ISCGS++
Sbjct: 292 ISCGSMS 298


>ref|XP_004169610.1| PREDICTED: uncharacterized LOC101205220 [Cucumis sativus]
          Length = 440

 Score =  273 bits (698), Expect = 4e-71
 Identities = 156/270 (57%), Positives = 180/270 (66%), Gaps = 13/270 (4%)
 Frame = +1

Query: 184 ERKVAVVYYLSRNGHLEHPHFMEVPLVSPEGLYLRDVINRLNILRGKGIATMYSWSSKRT 363
           +RKV VVYYLSRNG LEHPHF+EVPL S EGLYLRDVINRLN+LRG G+A+ YSWSSKR+
Sbjct: 41  DRKVPVVYYLSRNGLLEHPHFIEVPLSSSEGLYLRDVINRLNVLRGNGMASAYSWSSKRS 100

Query: 364 YKNGYVWHDLSENDFIYPTHGCEYVLKGSELLERSLSFRXXXXXXXXXXXXXXXXXXQNN 543
           YKNG+VWHDLSENDFIYP HG EYVLKGSELL  SL  R                  +  
Sbjct: 101 YKNGFVWHDLSENDFIYPLHGKEYVLKGSELLHSSLETR-VQGSESSRSLRPPPEIHKLG 159

Query: 544 TRNSDFPMV-RRRNQSWSSIDLHEYKVVYKADSSGEALGK--AADASTQTEDKRRRRRTV 714
           + +SD P++ RRRNQSWSS+D HEYK VYK DSS ++  K  AADASTQTE+K RRRR  
Sbjct: 160 SEDSDSPILSRRRNQSWSSVDFHEYK-VYKTDSSSDSSAKAAAADASTQTEEKHRRRRRA 218

Query: 715 E----------DPNTTTELSREEIXXXXXXXXXETLETLMKVDDSVINNNITTSTDESAD 864
                      +P  +TELSREEI         ETLE+LMK D  +I         E A 
Sbjct: 219 TREEEKETEEVNPTASTELSREEISPPPSDSSPETLESLMKADGRLI-------ISEGAK 271

Query: 865 IRNQMGKNHPSGRSKASAMLMQLISCGSIT 954
                 ++ PSGR KASA+LMQLISCGSI+
Sbjct: 272 PNRTTAESFPSGRMKASAVLMQLISCGSIS 301


>ref|XP_004149057.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101205220, partial [Cucumis sativus]
          Length = 438

 Score =  267 bits (683), Expect = 2e-69
 Identities = 156/274 (56%), Positives = 180/274 (65%), Gaps = 17/274 (6%)
 Frame = +1

Query: 184 ERKVAVVYYLSRN----GHLEHPHFMEVPLVSPEGLYLRDVINRLNILRGKGIATMYSWS 351
           +RKV VVYYLSRN    G LEHPHF+EVPL S EGLYLRDVINRLN+LRG G+A+ YSWS
Sbjct: 35  DRKVPVVYYLSRNPPRTGLLEHPHFIEVPLSSSEGLYLRDVINRLNVLRGNGMASAYSWS 94

Query: 352 SKRTYKNGYVWHDLSENDFIYPTHGCEYVLKGSELLERSLSFRXXXXXXXXXXXXXXXXX 531
           SKR+YKNG+VWHDLSENDFIYP HG EYVLKGSELL  SL  R                 
Sbjct: 95  SKRSYKNGFVWHDLSENDFIYPLHGKEYVLKGSELLHSSLETR-VQGSESSRSLRPPPEI 153

Query: 532 XQNNTRNSDFPMV-RRRNQSWSSIDLHEYKVVYKADSSGEALGK--AADASTQTEDKRRR 702
            +  + +SD P++ RRRNQSWSS+D HEYK VYK DSS ++  K  AADASTQTE+K RR
Sbjct: 154 HKLGSEDSDSPILSRRRNQSWSSVDFHEYK-VYKTDSSSDSSAKAAAADASTQTEEKHRR 212

Query: 703 RRTVE----------DPNTTTELSREEIXXXXXXXXXETLETLMKVDDSVINNNITTSTD 852
           RR             +P  +TELSREEI         ETLE+LMK D  +I         
Sbjct: 213 RRRATREEEKETEAVNPTASTELSREEISPPPSDSSPETLESLMKADGRLI-------IS 265

Query: 853 ESADIRNQMGKNHPSGRSKASAMLMQLISCGSIT 954
           E A       ++ PSGR KASA+LMQLISCGSI+
Sbjct: 266 EGAKPNRTTAESFPSGRMKASAVLMQLISCGSIS 299


>ref|NP_001234635.1| auxin-regulated protein [Solanum lycopersicum]
           gi|15808946|gb|AAL08561.1| auxin-regulated protein
           [Solanum lycopersicum]
          Length = 433

 Score =  266 bits (681), Expect = 4e-69
 Identities = 157/300 (52%), Positives = 191/300 (63%), Gaps = 28/300 (9%)
 Frame = +1

Query: 139 SSKGRKEFELPNKYKERKVAVVYYLSRNGHLEHPHFMEVPLVSPEGLYLRDVINRLNILR 318
           S +  K +  P  +K  KV VVYYLSRNG LEHPHFMEVPL S +GLYLRDVINRLN LR
Sbjct: 19  SPERTKVWTEPPNHKLSKVPVVYYLSRNGQLEHPHFMEVPLSSRDGLYLRDVINRLNCLR 78

Query: 319 GKGIATMYSWSSKRTYKNGYVWHDLSENDFIYPTHGCEYVLKGSELLERSLSFRXXXXXX 498
           GKG+A+MYSWS+KR+Y+NG+VWHDL+ENDFIYP HG EYVLKGSELL+ +L  +      
Sbjct: 79  GKGMASMYSWSAKRSYRNGFVWHDLTENDFIYPAHGQEYVLKGSELLDSALPSQ--PDEI 136

Query: 499 XXXXXXXXXXXXQNNTRNSDFPMV-RRRNQSWSSIDLHEYKVVYKADSSGEALGK-AADA 672
                       Q  + + +FP V RRRNQSWSS D HEY +VYKA+S GE LG+  ADA
Sbjct: 137 ACSNSRNTVPEKQKLSEDREFPAVARRRNQSWSSSDFHEY-LVYKAESPGEILGRIGADA 195

Query: 673 STQTEDKRRRR---RTVED-----------------------PNTTTELSREEIXXXXXX 774
           STQTED+RRRR   R VE+                       PN +TEL+R EI      
Sbjct: 196 STQTEDRRRRRGGMRIVEEEEELSENRIIESDCKEPDEVEHSPNQSTELNRGEISPPLSD 255

Query: 775 XXXETLETLMKVDDSVINNNITTSTDESADIRNQMGKNHPSGRSKASAMLMQLISCGSIT 954
              ETLETLMK D  +I    T S D +A+        H SG+SKA+++LMQL+ CGS++
Sbjct: 256 SSSETLETLMKADGKLILRPDTISEDPTAN-------THSSGKSKAASVLMQLLYCGSMS 308


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