BLASTX nr result

ID: Coptis24_contig00020249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020249
         (1864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    96   2e-17
emb|CCA66053.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   4e-12
emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...    79   4e-12
ref|XP_003604996.1| hypothetical protein MTR_4g022640 [Medicago ...    77   2e-11
emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   6e-11

>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
           gi|355478601|gb|AES59804.1| hypothetical protein
           MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 54/184 (29%), Positives = 89/184 (48%)
 Frame = +3

Query: 189 SLIGKLVSDQEQNPNEVLHAIRSKWKLKKKLDIVVVNGNLFILRFEKENDKNKILNAQPW 368
           +L+GK+ +D   N       +   W+LK  ++I  +N NLF+ +F    D   IL + PW
Sbjct: 33  TLVGKIWTDVPYNVRAFKQTMIQAWRLKNTVEIQDLNKNLFLFKFSSRRDAENILQSGPW 92

Query: 369 QMLGYLLVLKSYSPELAPSDINFDQAPFWITFGGLHLEHQMPVFIEQISSTVGRFLEIYP 548
                LL+L + S E  PS+++     FW+    L L+ +  +  ++I   VG+FLE+ P
Sbjct: 93  SFDRNLLILDTISGEEQPSELDLHTVQFWVRIYDLPLKLRYDLMAKKIGDLVGKFLEVDP 152

Query: 549 ADDSPRDAEGYRARVMVDLRNLLRQGHLVPTVNHGSVWITFNYVGIPFRNCKNCFRLGHD 728
            D++ R  +  R +V +DLRN L++G ++P                    C  C R+GH 
Sbjct: 153 RDNN-RMGKSIRIKVAIDLRNPLKRGTVLPNF------------------CYKCGRIGHQ 193

Query: 729 TYSC 740
              C
Sbjct: 194 MKEC 197


>emb|CCA66053.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 452

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 51/186 (27%), Positives = 85/186 (45%)
 Frame = +3

Query: 192 LIGKLVSDQEQNPNEVLHAIRSKWKLKKKLDIVVVNGNLFILRFEKENDKNKILNAQPWQ 371
           L+G+L++ +  N       I + W  K  L I V+  NLF  +F    D  K+L+ +PW 
Sbjct: 39  LLGRLLTVRSYNVEAFKRTITTVWAPKHGLVIRVLKPNLFAFQFFHWRDMMKVLDGRPWC 98

Query: 372 MLGYLLVLKSYSPELAPSDINFDQAPFWITFGGLHLEHQMPVFIEQISSTVGRFLEIYPA 551
               L++LK    +  P  ++ + +PFWI    L L H+    ++ +   +G  L+I   
Sbjct: 99  FDNTLILLKEAEGDEQPDQVSLNHSPFWIRLKNLSLNHRSNDVVKALIGNMGEILDI--E 156

Query: 552 DDSPRDAEGYRARVMVDLRNLLRQGHLVPTVNHGSVWITFNYVGIPFRNCKNCFRLGHDT 731
           +D        R +VM+D+   LR+   +       + I F Y  +PF  C  C  +GH  
Sbjct: 157 EDVLGFGRYRRVKVMLDVSKPLRRYRKIRDKRGRELQIDFAYERLPF-FCLACGVMGHSE 215

Query: 732 YSCSMV 749
             C +V
Sbjct: 216 KDCQVV 221


>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score = 79.0 bits (193), Expect = 4e-12
 Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
 Frame = +3

Query: 87  SLILGNTETESRELNLVMDIPRNLLLQSHARWTTSLIGKLVSDQEQNPNEVLHAIRSKWK 266
           SL   + E    +  L +   +  L +    W  +L+GK++     + N ++  +   WK
Sbjct: 91  SLEWDDEEVPIPDSQLAVSFTKETLWKLREPWRNTLMGKVLG-MSISRNFLVERVNRIWK 149

Query: 267 LKKKLDIVVVNGNLFILRFEKENDKNKILNAQPWQMLGYLLVLKSYSPELAPSDINFDQA 446
              K++++ +  ++F+ +F   ND  K L   PW +L + L+L  + P+  PS   FD+ 
Sbjct: 150 TNDKVEVIDLGHDVFLFKFNNGNDMEKALFGGPWFILNHYLMLTRWKPDFRPSQSVFDKI 209

Query: 447 PFWITFGGLHLEHQMPVFIEQISSTVGRFLEIYPADDSPRDAEGYRARVMVDLRNLLRQG 626
             WI F  L LE+     +  I+  VG+ +++  A D    A G  ARV ++L       
Sbjct: 210 MVWIRFPELPLEYYDKEALFAIAGKVGKPIKVDYATD--HMARGRYARVCIELD------ 261

Query: 627 HLVPTVNHGSVWITFNYVGIPFRN----CKNCFRLGHDTYSCS 743
             +       VW+   +  + + N    C  C ++GH    CS
Sbjct: 262 --LAKALVSKVWVARAWQNVEYENLSLVCFLCGKIGHRRDQCS 302


>ref|XP_003604996.1| hypothetical protein MTR_4g022640 [Medicago truncatula]
           gi|355506051|gb|AES87193.1| hypothetical protein
           MTR_4g022640 [Medicago truncatula]
          Length = 513

 Score = 77.0 bits (188), Expect = 2e-11
 Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 4/202 (1%)
 Frame = +3

Query: 180 WTTSLIGKLVSDQEQNPNEVLHAIRSKWKLKKKLDIVVVNGNLFILRFEKENDKNKILNA 359
           W  +L+ KL+  +    N +   ++  WKL+   +I+  +   ++++F++E DK K++  
Sbjct: 84  WKDALVVKLLG-KNLGYNTMKDRLQRIWKLQSGFEIMDNDNGFYMVKFDQEADKEKVVTG 142

Query: 360 QPWQMLGYLLVLKSYSPELAPSDINFDQAPFWITFGGLHLEHQMPVFIEQISSTVGRFLE 539
            PW +  + L +  +SPE A  +   ++   W+ F GL+L +    F+  ++S +GR ++
Sbjct: 143 GPWMIFDHCLAVTHWSPEFASPEARVERTVVWVRFPGLNLVYYDESFLLAMASAIGRPIK 202

Query: 540 IYPADDSPRDAEGYRARVMVDLRNLLRQGHLVPTVNHGSVWITFNYVGIPFRN----CKN 707
           +    ++ +   G  ARV V++         VP V  G +W+  ++  I +      C N
Sbjct: 203 V--DTNTLKVERGKFARVCVEI------DLTVPVV--GKIWVNGHWYKIQYEGLHLICTN 252

Query: 708 CFRLGHDTYSCSMVPPPRLNNV 773
           C   GH   +C+  P  +++ V
Sbjct: 253 CGCYGHLGRNCNQ-PTTKIDKV 273


>emb|CCA66049.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 465

 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 47/187 (25%), Positives = 87/187 (46%)
 Frame = +3

Query: 180 WTTSLIGKLVSDQEQNPNEVLHAIRSKWKLKKKLDIVVVNGNLFILRFEKENDKNKILNA 359
           +T SLIGK+V+ +  N + +   +   W + K     ++  +LF+++F  + DK K++  
Sbjct: 36  FTLSLIGKVVTVRSFNFDALKRTLNQIWSISKGAIFRIIENDLFVVQFACKRDKEKVMAG 95

Query: 360 QPWQMLGYLLVLKSYSPELAPSDINFDQAPFWITFGGLHLEHQMPVFIEQISSTVGRFLE 539
           +PW     L++L+    ++ PS++    +PFW+    L +  +    I  I   +G  LE
Sbjct: 96  RPWSFDQSLVLLQEIDADVQPSNVRLTHSPFWVRVYNLPMRCRSEQHIRMIGGCIGDVLE 155

Query: 540 IYPADDSPRDAEGYRARVMVDLRNLLRQGHLVPTVNHGSVWITFNYVGIPFRNCKNCFRL 719
           +    +   D +  R RV++D+   LR+       N  S  +   Y  +P   C  C  +
Sbjct: 156 V-DTHEILWD-KSARIRVLIDITKPLRRVQRFALKNGVSALVEIKYERLP-TFCFLCGVI 212

Query: 720 GHDTYSC 740
           GH    C
Sbjct: 213 GHIGRDC 219


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