BLASTX nr result

ID: Coptis24_contig00020244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020244
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327292.1| predicted protein [Populus trichocarpa] gi|2...   187   5e-45
emb|CBI39223.3| unnamed protein product [Vitis vinifera]              149   2e-33
ref|XP_004166338.1| PREDICTED: uncharacterized LOC101208955 [Cuc...   132   2e-28
ref|XP_004141642.1| PREDICTED: uncharacterized protein LOC101208...   129   2e-27
ref|XP_002526401.1| conserved hypothetical protein [Ricinus comm...    94   8e-17

>ref|XP_002327292.1| predicted protein [Populus trichocarpa] gi|222835662|gb|EEE74097.1|
            predicted protein [Populus trichocarpa]
          Length = 286

 Score =  187 bits (476), Expect = 5e-45
 Identities = 108/284 (38%), Positives = 150/284 (52%)
 Frame = -3

Query: 1501 TFPXRSLDYFMTEVQTVNTIAESYFSFYMNXXXXXXXLIY*KWKVRVQEHWKDQQCSKQF 1322
            TFP  SL +++   +    +AE                   +W+  +Q+  K Q  +  +
Sbjct: 26   TFPSPSLKWWVNSKKHFTVLAE-------------------RWRFHIQDISKGQSSTNPY 66

Query: 1321 IVHVVKGGETLTSISRLYGMSVHSIAAVNEKLFDINLVLEGQRLNIPSSGVSNTNKDSMW 1142
            ++HVVK GETLTSIS+ YG+S++S+AA N+ + D++LV EGQ LNIP++  + T    + 
Sbjct: 67   LLHVVKEGETLTSISKQYGVSIYSVAAANKNILDVDLVFEGQLLNIPAAAPAGTQVYQIK 126

Query: 1141 RIRLYCIKARDRYQHSLTXXXXXXXXXXXXXXXVFTVLYPRNLLPVRTTGYILVVVPLIA 962
            +         +R Q+ +                 F  +    L   + TGY LV+VP +A
Sbjct: 127  KCESPSFDQLERLQNFMKIMDGVLNQKP------FITVTTLRLPHAKATGYFLVLVPALA 180

Query: 961  FCIGCIINVFHQRVGEYLKRPVVNKSNVHHPRSRNIHWKTALSDIREAEVLDDESGQDSQ 782
            FCI CII  FH R    L     N+S  HH    +  WK ALSDIRE + LD E   +S 
Sbjct: 181  FCIRCIIGAFHTRARRNLGCQASNESRRHHDVPESKRWKHALSDIREPDNLDGEPILNST 240

Query: 781  TPHEDPSPVSFEDMSHAYTKIEPAYQKFLSECGMSESGYWRGGS 650
                D    SFE++SHAY K+E  YQKFLSECG+S SGYWRGGS
Sbjct: 241  GTSADQDQNSFEEVSHAYDKLEHEYQKFLSECGISNSGYWRGGS 284


>emb|CBI39223.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  149 bits (377), Expect = 2e-33
 Identities = 86/198 (43%), Positives = 113/198 (57%)
 Frame = -3

Query: 1378 KWKVRVQEHWKDQQCSKQFIVHVVKGGETLTSISRLYGMSVHSIAAVNEKLFDINLVLEG 1199
            KW+ ++QE  K Q  +K   VH+VK GETL+SIS+ YG+S++SIAA N+ + DI+LV  G
Sbjct: 40   KWRFQIQEISKGQHSTKHNSVHMVKEGETLSSISKQYGVSIYSIAAANKNIEDIDLVFCG 99

Query: 1198 QRLNIPSSGVSNTNKDSMWRIRLYCIKARDRYQHSLTXXXXXXXXXXXXXXXVFTVLYPR 1019
            Q LNIPSS V  T K    + +L       R+QHSL                 F      
Sbjct: 100  QHLNIPSSAVGETQKFQTEKSKLSSFDTLKRHQHSLEVLGGRLNQKLCTVALSF-----H 154

Query: 1018 NLLPVRTTGYILVVVPLIAFCIGCIINVFHQRVGEYLKRPVVNKSNVHHPRSRNIHWKTA 839
            +L   + TGY LV+VPLIAFCI CII  F  RV   L+   VN+S V +  S+++ WK+A
Sbjct: 155  SLSHAKATGYFLVLVPLIAFCIRCIIGAFQNRVVGDLRHQAVNESEVDYHGSKSVRWKSA 214

Query: 838  LSDIREAEVLDDESGQDS 785
            L DIRE + LD     DS
Sbjct: 215  LDDIREPDTLDTGLQPDS 232


>ref|XP_004166338.1| PREDICTED: uncharacterized LOC101208955 [Cucumis sativus]
          Length = 303

 Score =  132 bits (333), Expect = 2e-28
 Identities = 85/243 (34%), Positives = 126/243 (51%), Gaps = 10/243 (4%)
 Frame = -3

Query: 1348 KDQQCSKQFIVHVVKGGETLTSISRLYGMSVHSIAAVNEKLFDINLVLEGQRLNIPS--- 1178
            K Q  +K   VH+++G E+LTS S   G   HSI   N+K+ D +L  +GQ + I +   
Sbjct: 60   KHQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKGQNIKIQNPRE 119

Query: 1177 -------SGVSNTNKDSMWRIRLYCIKARDRYQHSLTXXXXXXXXXXXXXXXVFTVLYPR 1019
                     + ++          + I  R+ +Q  L                +F  L   
Sbjct: 120  LLVELLQKEIDSSKLFYTSHFPNFDIMIRNAFQ--LEEKLQSALNGLRIYKKLFA-LASS 176

Query: 1018 NLLPVRTTGYILVVVPLIAFCIGCIINVFHQRVGEYLKRPVVNKSNVHHPRSRNIHWKTA 839
            +  P RTT +I V+VPL+ FC  CII   + R    LK   ++K      + R+ HW++A
Sbjct: 177  HQPPARTTSFI-VLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRSA 235

Query: 838  LSDIREAEVLDDESGQDSQTPHEDPSPVSFEDMSHAYTKIEPAYQKFLSECGMSESGYWR 659
            L DIRE + LD E+  DS +P ED   +S E++SHAY K++  Y+KFLSECG+S+ GYWR
Sbjct: 236  LRDIRELDGLDCEAPIDSTSPSED-EQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 294

Query: 658  GGS 650
            GG+
Sbjct: 295  GGT 297


>ref|XP_004141642.1| PREDICTED: uncharacterized protein LOC101208955 [Cucumis sativus]
          Length = 413

 Score =  129 bits (325), Expect = 2e-27
 Identities = 84/243 (34%), Positives = 125/243 (51%), Gaps = 10/243 (4%)
 Frame = -3

Query: 1348 KDQQCSKQFIVHVVKGGETLTSISRLYGMSVHSIAAVNEKLFDINLVLEGQRLNIPS--- 1178
            K Q  +K   VH+++G E+LTS S   G   HSI   N+K+ D +L  + Q + I +   
Sbjct: 170  KHQLSTKHHFVHILEGNESLTSTSNQNGDPPHSIVMANKKIMDTDLEQKRQNIKIQNPRE 229

Query: 1177 -------SGVSNTNKDSMWRIRLYCIKARDRYQHSLTXXXXXXXXXXXXXXXVFTVLYPR 1019
                     + ++          + I  R+ +Q  L                +F  L   
Sbjct: 230  LLVELLQKEIDSSKLFYTSHFPNFDIMIRNAFQ--LEEKLQSALNGLRIYKKLFA-LASS 286

Query: 1018 NLLPVRTTGYILVVVPLIAFCIGCIINVFHQRVGEYLKRPVVNKSNVHHPRSRNIHWKTA 839
            +  P RTT +I V+VPL+ FC  CII   + R    LK   ++K      + R+ HW++A
Sbjct: 287  HQPPARTTSFI-VLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRSA 345

Query: 838  LSDIREAEVLDDESGQDSQTPHEDPSPVSFEDMSHAYTKIEPAYQKFLSECGMSESGYWR 659
            L DIRE + LD E+  DS +P ED   +S E++SHAY K++  Y+KFLSECG+S+ GYWR
Sbjct: 346  LRDIRELDGLDCEAPIDSTSPSED-EQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 404

Query: 658  GGS 650
            GG+
Sbjct: 405  GGT 407


>ref|XP_002526401.1| conserved hypothetical protein [Ricinus communis]
            gi|223534263|gb|EEF35977.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 259

 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 61/171 (35%), Positives = 87/171 (50%)
 Frame = -3

Query: 1300 GETLTSISRLYGMSVHSIAAVNEKLFDINLVLEGQRLNIPSSGVSNTNKDSMWRIRLYCI 1121
            GE L SISR YG S H I   N+ + D++ + +GQ  NIP+   ++     +++I+   I
Sbjct: 64   GEKLNSISRHYGESFHPIVDSNKNISDVDFLCKGQLPNIPAFVPADCQ---LYQIK---I 117

Query: 1120 KARDRYQHSLTXXXXXXXXXXXXXXXVFTVLYPRNLLPVRTTGYILVVVPLIAFCIGCII 941
              +  +                     F +L   +L   ++TGY LV+VPLIAFCI CI+
Sbjct: 118  SGKSSFYQKERPRSSMAILDGFLKQKPFILLSSHSLPHAKSTGYFLVLVPLIAFCITCIL 177

Query: 940  NVFHQRVGEYLKRPVVNKSNVHHPRSRNIHWKTALSDIREAEVLDDESGQD 788
              FH RV   + R  V+KS      S  + WK ALSDI+E + LD ES  D
Sbjct: 178  GAFHTRVPSDMGRRAVDKSRKKGHNS--MRWKNALSDIKEQDNLDSESSTD 226


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