BLASTX nr result

ID: Coptis24_contig00020243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020243
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-lik...   334   4e-89
ref|XP_002511915.1| 2-hydroxyacid dehydrogenase, putative [Ricin...   315   3e-83
emb|CBI40402.3| unnamed protein product [Vitis vinifera]              313   6e-83
ref|XP_002275405.2| PREDICTED: C-terminal binding protein AN-lik...   313   8e-83
ref|XP_002892061.1| hypothetical protein ARALYDRAFT_311286 [Arab...   310   8e-82

>ref|XP_004133847.1| PREDICTED: C-terminal binding protein AN-like [Cucumis sativus]
          Length = 944

 Score =  334 bits (856), Expect = 4e-89
 Identities = 176/309 (56%), Positives = 226/309 (73%)
 Frame = +2

Query: 122  NSSMSITIPKKPTYLLTNGPNLQPPSAWFEIRLFYVRISPCVINNVPEFLKILHLRREIG 301
            +SSM I+   + +   TNG +L   SAWFE+RLFYVRISPCVI +VP+ L + HLRREIG
Sbjct: 7    DSSMPIS---RTSNSYTNGLSLTH-SAWFEVRLFYVRISPCVIASVPDHLNLRHLRREIG 62

Query: 302  VSMEINGSKIPASDTATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMMI 481
            VS+EINGS+IPASD+A++ LRRDR++KE+SEVTYVSTDSIRVTG +EFEVYEN +   +I
Sbjct: 63   VSLEINGSQIPASDSASIALRRDRLNKESSEVTYVSTDSIRVTGGVEFEVYENED---LI 119

Query: 482  LCGSLERIDSSWSXXXXXXXXXXXXXXKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVLC 661
            LCGSLER+D++W                + KTGW+M+C++A+ + +G SAFFQPKLGV  
Sbjct: 120  LCGSLERMDANW-------INGSVGLENNSKTGWTMECFMAASMCSGSSAFFQPKLGVSS 172

Query: 662  PSIEVYVAGCCSGVPLILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGMIRQR 841
            P+IEVY+AGCCSG+P+ILT+TIQ+SPRR+ +R   LDAIPEDEE GKE   GSNG+IR +
Sbjct: 173  PAIEVYIAGCCSGMPVILTQTIQVSPRRRNLRQAVLDAIPEDEEVGKEE-NGSNGLIRHQ 231

Query: 842  KFEVSDSEVEEYDLERKVTPDYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXX 1021
            K ++ +SEV++YD + K+   YY +DM YT EDGQL+WFNAGVR                
Sbjct: 232  KVQMLESEVDDYDPDGKMGHGYYGDDM-YTGEDGQLSWFNAGVRVGVGIGLGVCLGVGIG 290

Query: 1022 XXXXMRSYQ 1048
                MRSYQ
Sbjct: 291  VGLLMRSYQ 299


>ref|XP_002511915.1| 2-hydroxyacid dehydrogenase, putative [Ricinus communis]
            gi|223549095|gb|EEF50584.1| 2-hydroxyacid dehydrogenase,
            putative [Ricinus communis]
          Length = 930

 Score =  315 bits (806), Expect = 3e-83
 Identities = 167/295 (56%), Positives = 208/295 (70%), Gaps = 1/295 (0%)
 Frame = +2

Query: 170  TNGPNLQPPSA-WFEIRLFYVRISPCVINNVPEFLKILHLRREIGVSMEINGSKIPASDT 346
            +N  NL   SA W EIRLFYVRI+PCVI++VP+ L + HLRREI   +EINGS+IPA+D+
Sbjct: 8    SNSYNLITSSATWLEIRLFYVRITPCVIDSVPDHLTLRHLRREISTPLEINGSRIPAADS 67

Query: 347  ATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMMILCGSLERIDSSWSXX 526
            A++TLRRDR++KE+SEVTYVSTDS+R+TGA+EFEV E N+   + LCGSLERI+S+    
Sbjct: 68   ASVTLRRDRLNKESSEVTYVSTDSVRITGALEFEVIEEND---LFLCGSLERIEST---- 120

Query: 527  XXXXXXXXXXXXKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVLCPSIEVYVAGCCSGVP 706
                         D KTGWSM+CY+A+ V  G S FFQPKLGV  P+IEVY+AGCC G+P
Sbjct: 121  --------TLWGNDSKTGWSMECYMAASVGEGNSVFFQPKLGVSAPAIEVYIAGCCGGIP 172

Query: 707  LILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGMIRQRKFEVSDSEVEEYDLE 886
            +ILTKTI +SPR+K  RHG LDAIPEDEE  KE+ G ++  +R RK ++ +SE ++ DLE
Sbjct: 173  VILTKTILVSPRKKGSRHGMLDAIPEDEEMEKEHNGDAS--LRLRKVQIIESEGDDSDLE 230

Query: 887  RKVTPDYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXXMRSYQA 1051
             K    YYS+DMYY  EDGQLTWFNAGVR                    MRSYQA
Sbjct: 231  EKTGNRYYSDDMYY-GEDGQLTWFNAGVRVGVGIGLGMCLGIGIGVGLLMRSYQA 284


>emb|CBI40402.3| unnamed protein product [Vitis vinifera]
          Length = 361

 Score =  313 bits (803), Expect = 6e-83
 Identities = 171/311 (54%), Positives = 213/311 (68%), Gaps = 5/311 (1%)
 Frame = +2

Query: 134  SITIPKKPT-----YLLTNGPNLQPPSAWFEIRLFYVRISPCVINNVPEFLKILHLRREI 298
            SI   K P      Y + +G +  PPS   EIRLFYVRI+PCVI++VP+ L + H+RR I
Sbjct: 55   SIASAKSPNSRSNLYRIIDGHS-SPPSVSLEIRLFYVRIAPCVIDSVPDHLTLCHIRRGI 113

Query: 299  GVSMEINGSKIPASDTATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMM 478
            GVS+EING++IPAS+TA+LTLRRDR+DKE+SEV YVSTDS+RV G +EFEVYE    + M
Sbjct: 114  GVSLEINGARIPASETASLTLRRDRLDKESSEVIYVSTDSVRVAGGVEFEVYE---KEEM 170

Query: 479  ILCGSLERIDSSWSXXXXXXXXXXXXXXKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVL 658
            ILCGSLER++SSW                  +TGW MDCY A+ V  G SAFFQPKLGV 
Sbjct: 171  ILCGSLERMESSWG-------NGSGGLENGSRTGWDMDCYTAASVVAGSSAFFQPKLGVS 223

Query: 659  CPSIEVYVAGCCSGVPLILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGMIRQ 838
             PSIEVY+AGC S +P+ILTKTIQ+SPR+KA RHG LDAIPE EE GK     SNG +RQ
Sbjct: 224  SPSIEVYIAGCSSSMPVILTKTIQISPRQKASRHGMLDAIPEGEEIGKAQ-ENSNGTVRQ 282

Query: 839  RKFEVSDSEVEEYDLERKVTPDYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXX 1018
            RK  +++++ ++Y+ + K+   ++SEDM Y+ EDGQLTWFNAGVR               
Sbjct: 283  RKDMITEAD-DDYESDGKIGHGFHSEDM-YSGEDGQLTWFNAGVRVGVGIGLGMCLGIGI 340

Query: 1019 XXXXXMRSYQA 1051
                 MRSYQA
Sbjct: 341  GVGLLMRSYQA 351


>ref|XP_002275405.2| PREDICTED: C-terminal binding protein AN-like [Vitis vinifera]
          Length = 952

 Score =  313 bits (802), Expect = 8e-83
 Identities = 172/311 (55%), Positives = 210/311 (67%), Gaps = 5/311 (1%)
 Frame = +2

Query: 134  SITIPKKPT-----YLLTNGPNLQPPSAWFEIRLFYVRISPCVINNVPEFLKILHLRREI 298
            SI   K P      Y + +G +  PPS   EIRLFYVRI+PCVI++VP+ L + H+RR I
Sbjct: 9    SIASAKSPNSRSNLYRIIDGHS-SPPSVSLEIRLFYVRIAPCVIDSVPDHLTLCHIRRGI 67

Query: 299  GVSMEINGSKIPASDTATLTLRRDRIDKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMM 478
            GVS+EING++IPAS+TA+LTLRRDR+DKE+SEV YVSTDS+RV G +EFEVYE    + M
Sbjct: 68   GVSLEINGARIPASETASLTLRRDRLDKESSEVIYVSTDSVRVAGGVEFEVYE---KEEM 124

Query: 479  ILCGSLERIDSSWSXXXXXXXXXXXXXXKDLKTGWSMDCYIASGVTTGGSAFFQPKLGVL 658
            ILCGSLER++SSW                  +TGW MDCY A+ V  G SAFFQPKLGV 
Sbjct: 125  ILCGSLERMESSWG-------NGSGGLENGSRTGWDMDCYTAASVVAGSSAFFQPKLGVS 177

Query: 659  CPSIEVYVAGCCSGVPLILTKTIQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNGMIRQ 838
             PSIEVY+AGC S +P+ILTKTIQ+SPR+KA RHG LDAIPE EE GK     SNG +RQ
Sbjct: 178  SPSIEVYIAGCSSSMPVILTKTIQISPRQKASRHGMLDAIPEGEEIGKAQ-ENSNGTVRQ 236

Query: 839  RKFEVSDSEVEEYDLERKVTPDYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXX 1018
            RK  V +   ++Y+ + K+   ++SEDM Y+ EDGQLTWFNAGVR               
Sbjct: 237  RKDMVMEFCHDDYESDGKIGHGFHSEDM-YSGEDGQLTWFNAGVRVGVGIGLGMCLGIGI 295

Query: 1019 XXXXXMRSYQA 1051
                 MRSYQA
Sbjct: 296  GVGLLMRSYQA 306


>ref|XP_002892061.1| hypothetical protein ARALYDRAFT_311286 [Arabidopsis lyrata subsp.
            lyrata] gi|297337903|gb|EFH68320.1| hypothetical protein
            ARALYDRAFT_311286 [Arabidopsis lyrata subsp. lyrata]
          Length = 1248

 Score =  310 bits (793), Expect = 8e-82
 Identities = 162/292 (55%), Positives = 200/292 (68%), Gaps = 7/292 (2%)
 Frame = +2

Query: 197  SAWFEIRLFYVRISPCVINNVPEFLKILHLRREIGVSMEINGSKIPASDTATLTLRRDRI 376
            SAW E+RLFYVRI+PCV+ NVP+FL + H RRE G S+E+NG ++P+S TA+L LRRDR+
Sbjct: 41   SAWLEVRLFYVRIAPCVVENVPDFLTLRHPRRETGASLEVNGVRVPSSQTASLKLRRDRV 100

Query: 377  DKETSEVTYVSTDSIRVTGAIEFEVYENNNNDMMILCGSLERIDSSWSXXXXXXXXXXXX 556
            D+E+SEVTYVST+++RVTG ++FEVY+   ND M+LCG+L+RI+ +W+            
Sbjct: 101  DRESSEVTYVSTETVRVTGCVDFEVYD---NDDMVLCGNLDRIEGAWN----------NG 147

Query: 557  XXKDLKTGWSMDCYIASG----VTTGGSAFFQPKLGVLCPSIEVYVAGCCSGVPLILTKT 724
               D KTGW MDCYIA G         SAFFQPKLGV  PS+EVY+AGCC GVP+ILTKT
Sbjct: 148  TVSDPKTGWGMDCYIAMGNGHVSGPSSSAFFQPKLGVSSPSVEVYIAGCCGGVPVILTKT 207

Query: 725  IQLSPRRKAVRHGGLDAIPEDEETGKENCGGSNG--MIRQRKFEVSDSEVEEYD-LERKV 895
            IQ SPRRK  RH  LDAIPEDEE GKE   G+ G  + RQ K ++ +SEV++YD  E K+
Sbjct: 208  IQASPRRKVARHVTLDAIPEDEEVGKEQDIGTIGDELARQSKVQMMESEVDDYDESEMKM 267

Query: 896  TPDYYSEDMYYTDEDGQLTWFNAGVRXXXXXXXXXXXXXXXXXXXXMRSYQA 1051
               YY E M Y DEDGQL+WFNAGVR                    MRSYQA
Sbjct: 268  AQRYYPEGM-YVDEDGQLSWFNAGVRVGVGIGLGMCLGVGIGVGLLMRSYQA 318


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