BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020242
         (1582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containi...   603   e-170
ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containi...   592   e-167
emb|CBI20033.3| unnamed protein product [Vitis vinifera]              549   e-154
ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containi...   538   e-150
emb|CBI25159.3| unnamed protein product [Vitis vinifera]              531   e-148

>ref|XP_002268032.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240-like
            [Vitis vinifera]
          Length = 480

 Score =  603 bits (1555), Expect = e-170
 Identities = 292/469 (62%), Positives = 367/469 (78%), Gaps = 5/469 (1%)
 Frame = -2

Query: 1581 KSLQRPTKNSIITKPPEDYP-----APLPIVSLSLTTQDQLFQFLKTHLKPPFNSQHLLH 1417
            ++L +P        PP   P      P+P +SL+ T+  QL QFLK HL P F  Q LL 
Sbjct: 8    QTLPKPLHPPSQFTPPTASPNLISSTPIPTLSLANTSHHQLHQFLKAHLTPSFTPQDLLI 67

Query: 1416 FLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDLHSVLEYMV 1237
            FL  KLHYHPKF+ FDLHIF WA+ ++SFRHDHSTYEWM++TLA+TDRF+DLHS+L+ MV
Sbjct: 68   FLKNKLHYHPKFSHFDLHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMV 127

Query: 1236 SNPCPCSDGIFCCPKIEDIFKFAINSYCRVGRLDEALIAFDSMRTLIDGKPNVVLYNILI 1057
            SNPCPCSDGIF CP+ E IF+FA+N++CRVGRL++A IAF SMR +IDGKP+V ++NILI
Sbjct: 128  SNPCPCSDGIFSCPRSEPIFRFALNAFCRVGRLEDAEIAFASMRRMIDGKPSVAMHNILI 187

Query: 1056 NGFAKFRKHERALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQSALEMFKEMRSKGCN 877
            NG+ K R+HE+ + +Y +M+KDRVKPDV+TFN+LISS CRNSQF  ALEMFKEM+ KGC+
Sbjct: 188  NGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCS 247

Query: 876  PNIVSFNTLIMGFFKQKKIEEGIGMAYEMLDIGFDFSVATCEILIDGLLREGRVSKACDL 697
            PN+VSFNTLI G F+++K EEG+GMAYEML++G +FS  TCEIL+DGL REGRV +A DL
Sbjct: 248  PNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEAFDL 307

Query: 696  LIDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIPLGSIACSTLIEGLRH 517
            LID   KGA+P+GFD   ++E LC +  ++R L+L+D+L  KG    SIAC+TLIEGLR 
Sbjct: 308  LIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNAPSSIACTTLIEGLRR 367

Query: 516  AGKTAEAVTFTERMLKEGIVADSVTFNCLLQALCAVGRTTDANRLRLLASKKGFDPDGMT 337
             GKT EA    E+ML+EGI+ DSVT NCLLQ LC VGR+ +AN+LRLLAS KG D DGMT
Sbjct: 368  FGKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANKLRLLASSKGLDSDGMT 427

Query: 336  YNILVAGFSREGKKKEGEGLVDEMLERDFIPDLATYNKLKDGLYIGEKS 190
            +NILV G+SREGK+KEG+ L+DEML+  FIPDLA+YN+L +GL  G  S
Sbjct: 428  FNILVNGYSREGKRKEGKRLLDEMLDLGFIPDLASYNRLMNGLSNGGSS 476


>ref|XP_002264269.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240-like
            [Vitis vinifera]
          Length = 588

 Score =  592 bits (1527), Expect = e-167
 Identities = 288/469 (61%), Positives = 361/469 (76%), Gaps = 5/469 (1%)
 Frame = -2

Query: 1581 KSLQRPTKNSIITKPPEDYP-----APLPIVSLSLTTQDQLFQFLKTHLKPPFNSQHLLH 1417
            K+L +P        PP   P      P+P +SL+ T+  QL QFLK HL P F  Q LL 
Sbjct: 116  KTLPKPLHPLSQFTPPTASPNLIPSTPIPTLSLANTSHHQLHQFLKAHLTPSFTPQDLLI 175

Query: 1416 FLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDLHSVLEYMV 1237
            FL  KLHYHPKF  FDLHIF WA+ ++SFRHD STYEWM++TLA+TDRF+DLHS+L+ MV
Sbjct: 176  FLKNKLHYHPKFAHFDLHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDLHSLLQGMV 235

Query: 1236 SNPCPCSDGIFCCPKIEDIFKFAINSYCRVGRLDEALIAFDSMRTLIDGKPNVVLYNILI 1057
            SNPCP SDGIF CP+ E IF+FA+N++CRVGRL++A I+F+SMR +IDGKP+V +YNILI
Sbjct: 236  SNPCPYSDGIFSCPRSEPIFRFALNAFCRVGRLEDAEISFESMRRMIDGKPSVAMYNILI 295

Query: 1056 NGFAKFRKHERALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQSALEMFKEMRSKGCN 877
            NG+   R+HE+ + +Y +M+KDRVKPDV+TFN+LISS CRNSQF  ALEMFKEM+ KGC+
Sbjct: 296  NGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCS 355

Query: 876  PNIVSFNTLIMGFFKQKKIEEGIGMAYEMLDIGFDFSVATCEILIDGLLREGRVSKACDL 697
            PN+VSFNTLI G F+++K EEGIGMAYEML++G +FS  TCEIL+DGL REGRV +ACDL
Sbjct: 356  PNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDL 415

Query: 696  LIDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIPLGSIACSTLIEGLRH 517
            LID   KGA+P+GFD   ++E LC +  ++R L+L+D+L  KG    SIAC+  IEGLR 
Sbjct: 416  LIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNAPSSIACTAFIEGLRR 475

Query: 516  AGKTAEAVTFTERMLKEGIVADSVTFNCLLQALCAVGRTTDANRLRLLASKKGFDPDGMT 337
              KT EA    E+ML+EGI+ DSVT NCLLQ LC VGR+ +AN LRLLAS KG D DGMT
Sbjct: 476  FRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANELRLLASSKGLDSDGMT 535

Query: 336  YNILVAGFSREGKKKEGEGLVDEMLERDFIPDLATYNKLKDGLYIGEKS 190
            +NILV G+SREGK+KEG+ L++EML+  FIPDLA+YN+L +GL  G  S
Sbjct: 536  FNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSNGGSS 584


>emb|CBI20033.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  549 bits (1415), Expect = e-154
 Identities = 273/469 (58%), Positives = 342/469 (72%), Gaps = 5/469 (1%)
 Frame = -2

Query: 1581 KSLQRPTKNSIITKPPEDYP-----APLPIVSLSLTTQDQLFQFLKTHLKPPFNSQHLLH 1417
            ++L +P        PP   P      P+P +SL+ T+  QL QFLK HL P F  Q LL 
Sbjct: 39   QTLPKPLHPPSQFTPPTASPNLISSTPIPTLSLANTSHHQLHQFLKAHLTPSFTPQDLLI 98

Query: 1416 FLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDLHSVLEYMV 1237
            FL  KLHYHPKF+ FDLHIF WA+ ++SFRHDHSTYEWM++TLA+TDRF+DLHS+L+ MV
Sbjct: 99   FLKNKLHYHPKFSHFDLHIFTWAATIDSFRHDHSTYEWMVKTLAITDRFDDLHSLLQGMV 158

Query: 1236 SNPCPCSDGIFCCPKIEDIFKFAINSYCRVGRLDEALIAFDSMRTLIDGKPNVVLYNILI 1057
            SNPCPCSDGIF CP+                              +IDGKP+V ++NILI
Sbjct: 159  SNPCPCSDGIFSCPR------------------------------MIDGKPSVAMHNILI 188

Query: 1056 NGFAKFRKHERALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQSALEMFKEMRSKGCN 877
            NG+ K R+HE+ + +Y +M+KDRVKPDV+TFN+LISS CRNSQF  ALEMFKEM+ KGC+
Sbjct: 189  NGYVKCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCS 248

Query: 876  PNIVSFNTLIMGFFKQKKIEEGIGMAYEMLDIGFDFSVATCEILIDGLLREGRVSKACDL 697
            PN+VSFNTLI G F+++K EEG+GMAYEML++G +FS  TCEIL+DGL REGRV +A DL
Sbjct: 249  PNVVSFNTLIKGSFRERKFEEGVGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEAFDL 308

Query: 696  LIDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIPLGSIACSTLIEGLRH 517
            LID   KGA+P+GFD   ++E LC +  ++R L+L+D+L  KG    SIAC+TLIEGLR 
Sbjct: 309  LIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNAPSSIACTTLIEGLRR 368

Query: 516  AGKTAEAVTFTERMLKEGIVADSVTFNCLLQALCAVGRTTDANRLRLLASKKGFDPDGMT 337
             GKT EA    E+ML+EGI+ DSVT NCLLQ LC VGR+ +AN+LRLLAS KG D DGMT
Sbjct: 369  FGKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANKLRLLASSKGLDSDGMT 428

Query: 336  YNILVAGFSREGKKKEGEGLVDEMLERDFIPDLATYNKLKDGLYIGEKS 190
            +NILV G+SREGK+KEG+ L+DEML+  FIPDLA+YN+L +GL  G  S
Sbjct: 429  FNILVNGYSREGKRKEGKRLLDEMLDLGFIPDLASYNRLMNGLSNGGSS 477


>ref|XP_004140672.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36240-like
            [Cucumis sativus] gi|449487417|ref|XP_004157616.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At2g36240-like [Cucumis sativus]
          Length = 486

 Score =  538 bits (1387), Expect = e-150
 Identities = 257/454 (56%), Positives = 337/454 (74%), Gaps = 1/454 (0%)
 Frame = -2

Query: 1566 PTKNSIITKPPEDYPAPLPIVSLSLTTQ-DQLFQFLKTHLKPPFNSQHLLHFLTKKLHYH 1390
            P  N+I+   P+   APL  +S S     +QL  FLK+HL  PF    LLHFL  KLH+H
Sbjct: 21   PLPNAILPPSPQTPVAPLLNLSFSSPHHYNQLLHFLKSHLTFPFTPNSLLHFLKSKLHFH 80

Query: 1389 PKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDLHSVLEYMVSNPCPCSDG 1210
            PKFT +D H+F WAS ++SFRHDHST+ WM RTLA TDRF +L S+L ++ S+PCPCSDG
Sbjct: 81   PKFTHYDFHVFNWASTIDSFRHDHSTFAWMARTLATTDRFFELTSLLRFLASSPCPCSDG 140

Query: 1209 IFCCPKIEDIFKFAINSYCRVGRLDEALIAFDSMRTLIDGKPNVVLYNILINGFAKFRKH 1030
            IF CP+ E IF+F+I++YCR  + DEA+ AFDSMR LIDG+P+VV+YNILINGF K  + 
Sbjct: 141  IFSCPQTESIFQFSISAYCRARKFDEAVFAFDSMRKLIDGRPSVVVYNILINGFVKSGRF 200

Query: 1029 ERALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQSALEMFKEMRSKGCNPNIVSFNTL 850
            ++AL  Y RM+ DRVKPDVYTFN LIS +CRNSQF  ALE+FKEMR KGC+PN++SFNTL
Sbjct: 201  DKALGFYSRMLSDRVKPDVYTFNILISGYCRNSQFVQALELFKEMREKGCSPNVISFNTL 260

Query: 849  IMGFFKQKKIEEGIGMAYEMLDIGFDFSVATCEILIDGLLREGRVSKACDLLIDLLRKGA 670
            I GFF+++K E+GI +AYEM+++G  FS  TCEIL+DGL REG++ +AC++L+D  RK  
Sbjct: 261  IKGFFRERKFEDGIALAYEMIELGCKFSSVTCEILMDGLSREGKIFEACEILLDFSRKQV 320

Query: 669  MPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIPLGSIACSTLIEGLRHAGKTAEAVT 490
            +P  +D   VVE LC      + +++VDEL  +G     I  +TLI+GLR  G+  +A+ 
Sbjct: 321  LPKDYDYYGVVEMLCGKGNAGKAMEVVDELWMEGNVPSFITSTTLIDGLRKEGRVNDAMN 380

Query: 489  FTERMLKEGIVADSVTFNCLLQALCAVGRTTDANRLRLLASKKGFDPDGMTYNILVAGFS 310
             TERML+ G++ DSVTFN LLQ LC V +T +AN+LRLLAS KGF+PD  TY  LV+G++
Sbjct: 381  VTERMLEVGMIPDSVTFNSLLQDLCNVRKTVEANKLRLLASSKGFEPDNKTYYTLVSGYT 440

Query: 309  REGKKKEGEGLVDEMLERDFIPDLATYNKLKDGL 208
             EG K EG+ LV+EML+++FIPD+ATYN+L D L
Sbjct: 441  MEGNKVEGQRLVEEMLDKEFIPDIATYNRLMDRL 474



 Score =  109 bits (272), Expect = 2e-21
 Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
 Frame = -2

Query: 966 FNTLISSFCRNSQFQSALEMFKEMRSK-GCNPNIVSFNTLIMGFFKQKKIEEGIGMAYEM 790
           F   IS++CR  +F  A+  F  MR      P++V +N LI GF K  + ++ +G    M
Sbjct: 151 FQFSISAYCRARKFDEAVFAFDSMRKLIDGRPSVVVYNILINGFVKSGRFDKALGFYSRM 210

Query: 789 LDIGFDFSVATCEILIDGLLREGRVSKACDLLIDLLRKGAMPDGFDCLDVVEGLCKDREL 610
           L       V T  ILI G  R  +  +A +L  ++  KG  P+      +++G  ++R+ 
Sbjct: 211 LSDRVKPDVYTFNILISGYCRNSQFVQALELFKEMREKGCSPNVISFNTLIKGFFRERKF 270

Query: 609 ERVLQLVDELLAKGIPLGSIACSTLIEGLRHAGKTAEAVTFTERMLKEGIVADSVTFNCL 430
           E  + L  E++  G    S+ C  L++GL   GK  EA        ++ ++     +  +
Sbjct: 271 EDGIALAYEMIELGCKFSSVTCEILMDGLSREGKIFEACEILLDFSRKQVLPKDYDYYGV 330

Query: 429 LQALCAVGRTTDANRLRLLASKKGFDPDGMTYNILVAGFSREGKKKEGEGLVDEMLERDF 250
           ++ LC  G    A  +      +G  P  +T   L+ G  +EG+  +   + + MLE   
Sbjct: 331 VEMLCGKGNAGKAMEVVDELWMEGNVPSFITSTTLIDGLRKEGRVNDAMNVTERMLEVGM 390

Query: 249 IPDLATYNKLKDGLYIGEKSILRQK 175
           IPD  T+N L   L    K++   K
Sbjct: 391 IPDSVTFNSLLQDLCNVRKTVEANK 415


>emb|CBI25159.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  531 bits (1367), Expect = e-148
 Identities = 268/469 (57%), Positives = 333/469 (71%), Gaps = 5/469 (1%)
 Frame = -2

Query: 1581 KSLQRPTKNSIITKPPEDYP-----APLPIVSLSLTTQDQLFQFLKTHLKPPFNSQHLLH 1417
            K+L +P        PP   P      P+P +SL+ T+  QL QFLK HL P F  Q LL 
Sbjct: 116  KTLPKPLHPLSQFTPPTASPNLIPSTPIPTLSLANTSHHQLHQFLKAHLTPSFTPQDLLI 175

Query: 1416 FLTKKLHYHPKFTQFDLHIFQWASKVESFRHDHSTYEWMIRTLAVTDRFNDLHSVLEYMV 1237
            FL  KLHYHPKF  FDLHIF WA+ ++SFRHD STYEWM++TLA+TDRF+DLHS+L+ MV
Sbjct: 176  FLKNKLHYHPKFAHFDLHIFTWAATIDSFRHDQSTYEWMVKTLAITDRFDDLHSLLQGMV 235

Query: 1236 SNPCPCSDGIFCCPKIEDIFKFAINSYCRVGRLDEALIAFDSMRTLIDGKPNVVLYNILI 1057
            SNPCP SDGIF                                 ++IDGKP+V +YNILI
Sbjct: 236  SNPCPYSDGIF---------------------------------SMIDGKPSVAMYNILI 262

Query: 1056 NGFAKFRKHERALELYGRMVKDRVKPDVYTFNTLISSFCRNSQFQSALEMFKEMRSKGCN 877
            NG+   R+HE+ + +Y +M+KDRVKPDV+TFN+LISS CRNSQF  ALEMFKEM+ KGC+
Sbjct: 263  NGYVNCREHEKVMTVYEKMIKDRVKPDVFTFNSLISSCCRNSQFGLALEMFKEMKDKGCS 322

Query: 876  PNIVSFNTLIMGFFKQKKIEEGIGMAYEMLDIGFDFSVATCEILIDGLLREGRVSKACDL 697
            PN+VSFNTLI G F+++K EEGIGMAYEML++G +FS  TCEIL+DGL REGRV +ACDL
Sbjct: 323  PNVVSFNTLIKGSFRERKFEEGIGMAYEMLELGCEFSNVTCEILVDGLCREGRVLEACDL 382

Query: 696  LIDLLRKGAMPDGFDCLDVVEGLCKDRELERVLQLVDELLAKGIPLGSIACSTLIEGLRH 517
            LID   KGA+P+GFD   ++E LC +  ++R L+L+D+L  KG    SIAC+  IEGLR 
Sbjct: 383  LIDFSGKGALPNGFDYFCLIEALCGEENVDRALELLDQLWRKGNAPSSIACTAFIEGLRR 442

Query: 516  AGKTAEAVTFTERMLKEGIVADSVTFNCLLQALCAVGRTTDANRLRLLASKKGFDPDGMT 337
              KT EA    E+ML+EGI+ DSVT NCLLQ LC VGR+ +AN LRLLAS KG D DGMT
Sbjct: 443  FRKTEEAFQLMEKMLREGILPDSVTCNCLLQDLCEVGRSFEANELRLLASSKGLDSDGMT 502

Query: 336  YNILVAGFSREGKKKEGEGLVDEMLERDFIPDLATYNKLKDGLYIGEKS 190
            +NILV G+SREGK+KEG+ L++EML+  FIPDLA+YN+L +GL  G  S
Sbjct: 503  FNILVNGYSREGKRKEGKRLLNEMLDLGFIPDLASYNRLMNGLSNGGSS 551