BLASTX nr result
ID: Coptis24_contig00020238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00020238
(1572 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003561297.1| PREDICTED: serine/threonine protein phosphat... 119 2e-77
dbj|BAK04196.1| predicted protein [Hordeum vulgare subsp. vulgare] 117 7e-76
gb|AAP68376.1| putative protein phosphatase 2A regulatory subuni... 214 9e-66
ref|XP_002326207.1| predicted protein [Populus trichocarpa] gi|2... 124 2e-65
ref|NP_187599.1| serine/threonine protein phosphatase 2A regulat... 125 1e-64
>ref|XP_003561297.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa
regulatory subunit B' alpha isoform-like isoform 1
[Brachypodium distachyon]
gi|357119129|ref|XP_003561298.1| PREDICTED:
serine/threonine protein phosphatase 2A 57 kDa
regulatory subunit B' alpha isoform-like isoform 2
[Brachypodium distachyon]
Length = 517
Score = 119 bits (297), Expect(5) = 2e-77
Identities = 59/69 (85%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
Frame = -2
Query: 206 QFVEKDYKLADTVIRGLLKYSPVINCQNEVLFLGEL-EMLESTQSAEFQRCMVPLFRQIG 30
QFVEKDYKLAD VIRGLLKY PVINCQ EVLFLGEL E+LE+TQ EFQRCMVPLF+QIG
Sbjct: 341 QFVEKDYKLADAVIRGLLKYWPVINCQKEVLFLGELEEVLEATQPTEFQRCMVPLFKQIG 400
Query: 29 RCLTSSHFQ 3
RCL SSHFQ
Sbjct: 401 RCLNSSHFQ 409
Score = 118 bits (296), Expect(5) = 2e-77
Identities = 57/79 (72%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Frame = -2
Query: 719 SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 543
+W HLQ+ YELLLR+ DTKIAK Y+DH+FV++LLD FDSEDP EREYLKTVLHRI
Sbjct: 198 AWPHLQLVYELLLRYVVSPDTDTKIAKRYVDHAFVLRLLDHFDSEDPREREYLKTVLHRI 257
Query: 542 YGKFMVHCPFIRRGINNIF 486
YGKFMVH PFIR+ INN+F
Sbjct: 258 YGKFMVHRPFIRKAINNVF 276
Score = 59.3 bits (142), Expect(5) = 2e-77
Identities = 32/64 (50%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Frame = -3
Query: 364 FYHFIFETERHXXXXXXXXXXXXXINGFALPMKDG------------HKPKSAAFYHEQL 221
FY FIFETERH INGFALPMK+ HKPKS YH+QL
Sbjct: 276 FYRFIFETERHNGIGELLEILGSIINGFALPMKEEHKLFLTRALIPLHKPKSVGIYHQQL 335
Query: 220 SYCI 209
SYCI
Sbjct: 336 SYCI 339
Score = 55.1 bits (131), Expect(5) = 2e-77
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Frame = -1
Query: 972 KLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSG--------KITEVVQEEL 817
KLR+ + +FDF ++K REKE KR LLE+VD++Q+ + ++ + VQE L
Sbjct: 101 KLRLVAALFDFSDSLKHPREKE--AKRQALLELVDYVQAPAAAANANAPARLPDNVQEAL 158
Query: 816 IRMVSVNIFWCLPLASHEN-TGIESGDPEEDD 724
I +SVNIF LP A +E+ I+ G +D+
Sbjct: 159 IAAISVNIFRPLPPAPYESAAAIDPGATPDDE 190
Score = 28.5 bits (62), Expect(5) = 2e-77
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 1069 LPGFGSSIIVVETLPLFRDVAISDRHNLFLCK 974
+P +S ++E LPL RDVA +DR L L K
Sbjct: 70 VPASHTSPPLLEPLPLLRDVAAADRPGLLLRK 101
>dbj|BAK04196.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 117 bits (293), Expect(5) = 7e-76
Identities = 57/69 (82%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Frame = -2
Query: 206 QFVEKDYKLADTVIRGLLKYSPVINCQNEVLFLGELE-MLESTQSAEFQRCMVPLFRQIG 30
QFVEKDYKLAD VIRGLLKY P+INCQ EVLFLGELE +LE+TQ AEFQ+CMVPLF+QIG
Sbjct: 346 QFVEKDYKLADAVIRGLLKYWPIINCQKEVLFLGELEDVLEATQPAEFQQCMVPLFKQIG 405
Query: 29 RCLTSSHFQ 3
RCL S+HFQ
Sbjct: 406 RCLNSAHFQ 414
Score = 114 bits (286), Expect(5) = 7e-76
Identities = 54/79 (68%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Frame = -2
Query: 719 SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 543
+W HL + YELLLR+ DTK+AK Y+DH+FV++LLD FD+EDP EREYLKTVLHRI
Sbjct: 203 AWPHLALVYELLLRYVVSPDTDTKVAKRYVDHAFVLRLLDHFDTEDPREREYLKTVLHRI 262
Query: 542 YGKFMVHCPFIRRGINNIF 486
YGKFMVH PFIR+ INN+F
Sbjct: 263 YGKFMVHRPFIRKAINNVF 281
Score = 60.8 bits (146), Expect(5) = 7e-76
Identities = 33/64 (51%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Frame = -3
Query: 364 FYHFIFETERHXXXXXXXXXXXXXINGFALPMKDG------------HKPKSAAFYHEQL 221
FY FIFETERH INGFALPMK+ HKPKS A YH+QL
Sbjct: 281 FYRFIFETERHNGIGELLEILGSIINGFALPMKEEHKLFLGRALIPLHKPKSVAIYHQQL 340
Query: 220 SYCI 209
SYCI
Sbjct: 341 SYCI 344
Score = 54.7 bits (130), Expect(5) = 7e-76
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Frame = -1
Query: 972 KLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSG----------KITEVVQE 823
KLR+ + +FDF ++K REKE KR LLE+VD++Q+ + ++ + VQE
Sbjct: 104 KLRLVAALFDFSDSLKHPREKE--AKRQALLELVDYVQAPAAAAGSNNNAPARLPDAVQE 161
Query: 822 ELIRMVSVNIFWCLPLASHENTGIESGDPEEDD 724
L+ +S NIF LP A HE+ + DD
Sbjct: 162 ALVAAISANIFRPLPPALHESAASIDPNATPDD 194
Score = 27.3 bits (59), Expect(5) = 7e-76
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 1042 VVETLPLFRDVAISDRHNLFLCK 974
++E LPL RDVA +DR L L K
Sbjct: 82 LLEPLPLLRDVAAADRPGLLLRK 104
>gb|AAP68376.1| putative protein phosphatase 2A regulatory subunit B' [Oryza sativa
Japonica Group] gi|108710424|gb|ABF98219.1| transposon
protein, putative, unclassified, expressed [Oryza sativa
Japonica Group] gi|108710425|gb|ABF98220.1| transposon
protein, putative, unclassified, expressed [Oryza sativa
Japonica Group] gi|108710426|gb|ABF98221.1| transposon
protein, putative, unclassified, expressed [Oryza sativa
Japonica Group]
Length = 535
Score = 214 bits (544), Expect(3) = 9e-66
Identities = 133/248 (53%), Positives = 153/248 (61%), Gaps = 9/248 (3%)
Frame = -2
Query: 719 SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 543
+W HLQ+ YELLLR+ DTK+AK Y+DH+FV++LLDLFDSEDP EREYLKTVLHRI
Sbjct: 216 AWPHLQLVYELLLRYVVSPDTDTKVAKRYVDHAFVLRLLDLFDSEDPREREYLKTVLHRI 275
Query: 542 YGKFMVHCPFIRRGINNIFLLNMGIQPKTNGDKWSGPRICILIC*ALDTRCGCGIIISTL 363
YGKFMVH PFIR+ INN+F + + NG G + IL II
Sbjct: 276 YGKFMVHRPFIRKAINNVFYRFIFETERHNG---IGELLEIL----------GSIINGFA 322
Query: 362 LPFHI*D*EA*WNR*VVGDSWKHNQRICPSNERRT*A*VGCILP*AAVILH-------TQ 204
LP K ++ S A + P + I H Q
Sbjct: 323 LPM------------------KEEHKLFLSR-----ALIPLHKPKSVAIYHQQLSYCIVQ 359
Query: 203 FVEKDYKLADTVIRGLLKYSPVINCQNEVLFLGEL-EMLESTQSAEFQRCMVPLFRQIGR 27
FVEKDYKLADTVIRGLLKY PVINCQ EVLFLGEL E+LE+TQ AEFQRCMVPLF+QIGR
Sbjct: 360 FVEKDYKLADTVIRGLLKYWPVINCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGR 419
Query: 26 CLTSSHFQ 3
CL SSHFQ
Sbjct: 420 CLNSSHFQ 427
Score = 59.7 bits (143), Expect(3) = 9e-66
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Frame = -1
Query: 978 VSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGS--------GKITEVVQE 823
V KLR+ + +FDF ++K REKE KR LLE+VD++Q+ S ++ E VQE
Sbjct: 117 VRKLRLVAALFDFTDSLKHPREKE--AKRQALLELVDYVQAPSPAANANAPARLPENVQE 174
Query: 822 ELIRMVSVNIFWCLPLASHEN-TGIESGDPEEDD 724
L+ +SVN+F LP A HE+ I+ G +D+
Sbjct: 175 ALVAAISVNVFRPLPPALHESAAAIDPGAAPDDE 208
Score = 26.2 bits (56), Expect(3) = 9e-66
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 1042 VVETLPLFRDVAISDRHNLFLCK 974
++E LPL RDVA +DR L + K
Sbjct: 97 LLEPLPLLRDVAAADRPGLLVRK 119
>ref|XP_002326207.1| predicted protein [Populus trichocarpa] gi|222833400|gb|EEE71877.1|
predicted protein [Populus trichocarpa]
Length = 427
Score = 124 bits (311), Expect(3) = 2e-65
Identities = 60/79 (75%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Frame = -2
Query: 719 SWGHLQIFYELLLRHC-FDRHDTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 543
SW HLQ+ YELLLR+ DTK+AK Y+DHSFV+KLLDLFDSEDP EREYLKT+LHRI
Sbjct: 109 SWPHLQLVYELLLRYVVMSDTDTKVAKRYVDHSFVLKLLDLFDSEDPREREYLKTILHRI 168
Query: 542 YGKFMVHCPFIRRGINNIF 486
YGKFMVH PFIR+ INNIF
Sbjct: 169 YGKFMVHRPFIRKAINNIF 187
Score = 119 bits (298), Expect(3) = 2e-65
Identities = 60/69 (86%), Positives = 62/69 (89%), Gaps = 1/69 (1%)
Frame = -2
Query: 206 QFVEKDYKLADTVIRGLLKYSPVINCQNEVLFLGEL-EMLESTQSAEFQRCMVPLFRQIG 30
QFVEKDYKLADTVIRG LKY PV NCQ EVLFLGEL E+LE+TQSAEFQRCMVPL RQI
Sbjct: 252 QFVEKDYKLADTVIRGFLKYWPVTNCQKEVLFLGELEEVLEATQSAEFQRCMVPLLRQIA 311
Query: 29 RCLTSSHFQ 3
RCLTSSHFQ
Sbjct: 312 RCLTSSHFQ 320
Score = 55.5 bits (132), Expect(3) = 2e-65
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = -3
Query: 364 FYHFIFETERHXXXXXXXXXXXXXINGFALPMKDG------------HKPKSAAFYHEQL 221
FY FI+ETERH INGFALPMK+ HKPK + YH QL
Sbjct: 187 FYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALIPLHKPKQISVYHHQL 246
Query: 220 SYCI 209
SYCI
Sbjct: 247 SYCI 250
Score = 105 bits (262), Expect(2) = 9e-24
Identities = 61/105 (58%), Positives = 72/105 (68%)
Frame = -1
Query: 981 FVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEELIRMVS 802
F+ KL++C FDF T+K REKEI KR LLE+VDFIQSGSGKITE QEE+I+MVS
Sbjct: 22 FLRKLQLCCFHFDFTDTLKSMREKEI--KRQTLLELVDFIQSGSGKITENCQEEMIKMVS 79
Query: 801 VNIFWCLPLASHENTGIESGDPEEDDSFLGAFANFL*IAIETLFR 667
VNIF CLP HENTG E DPEE++ +L L + E L R
Sbjct: 80 VNIFRCLP--PHENTGQEPTDPEEEEPYLEPSWPHLQLVYELLLR 122
Score = 32.7 bits (73), Expect(2) = 9e-24
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 1039 VETLPLFRDVAISDRHNLFLCK 974
VE LP FRDV +S+R NLFL K
Sbjct: 4 VEPLPFFRDVPVSERPNLFLRK 25
>ref|NP_187599.1| serine/threonine protein phosphatase 2A regulatory subunit B prime
beta isoform [Arabidopsis thaliana]
gi|75097015|sp|O04376.1|2A5B_ARATH RecName:
Full=Serine/threonine protein phosphatase 2A 57 kDa
regulatory subunit B' beta isoform; Short=AtB' beta;
Short=PP2A, B' subunit, beta isoform
gi|6681331|gb|AAF23248.1|AC015985_6 B' regulatory
subunit of PP2A (AtB'beta) [Arabidopsis thaliana]
gi|2160692|gb|AAB58901.1| B' regulatory subunit of PP2A
[Arabidopsis thaliana] gi|18176455|gb|AAL60047.1|
putative B' regulatory subunit of PP2A AtB'beta
[Arabidopsis thaliana] gi|21280992|gb|AAM44900.1|
putative B' regulatory subunit of PP2A AtB'beta
[Arabidopsis thaliana] gi|332641304|gb|AEE74825.1|
serine/threonine protein phosphatase 2A regulatory
subunit B prime beta isoform [Arabidopsis thaliana]
Length = 499
Score = 125 bits (313), Expect(3) = 1e-64
Identities = 61/79 (77%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
Frame = -2
Query: 719 SWGHLQIFYELLLRHCFDRH-DTKIAK*YIDHSFVMKLLDLFDSEDPCEREYLKTVLHRI 543
SW HLQ+ YELLLR+ DTK+AK YIDHSFV+KLLDLFDSEDP EREYLKT+LHRI
Sbjct: 176 SWPHLQLVYELLLRYVVSTDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRI 235
Query: 542 YGKFMVHCPFIRRGINNIF 486
YGKFMVH PFIR+ INNIF
Sbjct: 236 YGKFMVHRPFIRKAINNIF 254
Score = 115 bits (289), Expect(3) = 1e-64
Identities = 58/69 (84%), Positives = 61/69 (88%), Gaps = 1/69 (1%)
Frame = -2
Query: 206 QFVEKDYKLADTVIRGLLKYSPVINCQNEVLFLGEL-EMLESTQSAEFQRCMVPLFRQIG 30
QFVEKDYKLADTVIRGLLKY PV NC E LFLGEL E+LE+TQ EFQRCMVPLF+QIG
Sbjct: 319 QFVEKDYKLADTVIRGLLKYWPVTNCSKENLFLGELEEVLEATQPVEFQRCMVPLFQQIG 378
Query: 29 RCLTSSHFQ 3
RCLTSSHFQ
Sbjct: 379 RCLTSSHFQ 387
Score = 55.5 bits (132), Expect(3) = 1e-64
Identities = 30/64 (46%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = -3
Query: 364 FYHFIFETERHXXXXXXXXXXXXXINGFALPMKDG------------HKPKSAAFYHEQL 221
FY FI+ETERH INGFALPMK+ HKPK YH+QL
Sbjct: 254 FYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLIRVLIPLHKPKPIVVYHQQL 313
Query: 220 SYCI 209
SYCI
Sbjct: 314 SYCI 317
Score = 106 bits (264), Expect(2) = 5e-24
Identities = 59/105 (56%), Positives = 73/105 (69%)
Frame = -1
Query: 981 FVSKLRICSVVFDFRGTVKCAREKEIEVKR*MLLEIVDFIQSGSGKITEVVQEELIRMVS 802
F+ KL+ C +FDF T+K AR+KEI KR LLE+VDFIQSGS KI+E QEE+I+M+S
Sbjct: 87 FLRKLQNCCFLFDFTDTIKNARDKEI--KRQTLLELVDFIQSGSSKISESCQEEMIKMIS 144
Query: 801 VNIFWCLPLASHENTGIESGDPEEDDSFLGAFANFL*IAIETLFR 667
VNIF LP ASHENTG E DPEE++ +L L + E L R
Sbjct: 145 VNIFRSLPPASHENTGQEPADPEEEEPYLEPSWPHLQLVYELLLR 189
Score = 32.7 bits (73), Expect(2) = 5e-24
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3
Query: 1039 VETLPLFRDVAISDRHNLFLCK 974
VE LPLFRDV +S+R LFL K
Sbjct: 69 VEPLPLFRDVPVSERQTLFLRK 90