BLASTX nr result

ID: Coptis24_contig00020235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020235
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31915.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   112   4e-23
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]   107   1e-21
emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]   105   5e-21
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   103   2e-20

>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/105 (48%), Positives = 72/105 (68%)
 Frame = -2

Query: 323 GGVLDSRYAAPLPLIGLYITTATLVCLLFIISDVYLGYRRKQPWLPCKYFSLNSLTLSLL 144
           G V DS +  P+P IG+Y+  A+LVC L + +D +L  R K+ W PCK+FSLN+ +L+++
Sbjct: 10  GSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTII 69

Query: 143 AIATKLPFDLTSPMPSPQDQLSKLCGTTLICISMGFFLPCVANME 9
           A+ATKL  DL + MP  QDQLSKL  T ++C  MG F+P +  ME
Sbjct: 70  AVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTME 114


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/105 (48%), Positives = 72/105 (68%)
 Frame = -2

Query: 323 GGVLDSRYAAPLPLIGLYITTATLVCLLFIISDVYLGYRRKQPWLPCKYFSLNSLTLSLL 144
           G V DS +  P+P IG+Y+  A+LVC L + +D +L  R K+ W PCK+FSLN+ +L+++
Sbjct: 10  GSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNATSLTII 69

Query: 143 AIATKLPFDLTSPMPSPQDQLSKLCGTTLICISMGFFLPCVANME 9
           A+ATKL  DL + MP  QDQLSKL  T ++C  MG F+P +  ME
Sbjct: 70  AVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTME 114


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/105 (47%), Positives = 69/105 (65%)
 Frame = -2

Query: 323 GGVLDSRYAAPLPLIGLYITTATLVCLLFIISDVYLGYRRKQPWLPCKYFSLNSLTLSLL 144
           G V DS +  P+P IG+Y   A+LVC L + +D +   R K+ W PCK+FSLN+ +L+++
Sbjct: 10  GSVNDSNFNXPMPWIGIYXAAASLVCSLAMGADAFXALRXKKFWFPCKFFSLNATSLTII 69

Query: 143 AIATKLPFDLTSPMPSPQDQLSKLCGTTLICISMGFFLPCVANME 9
           A+ATKL  DL + MP  QDQLSKL  T  +C  MG F+P +  ME
Sbjct: 70  AVATKLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTME 114


>emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]
          Length = 287

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/105 (46%), Positives = 68/105 (64%)
 Frame = -2

Query: 323 GGVLDSRYAAPLPLIGLYITTATLVCLLFIISDVYLGYRRKQPWLPCKYFSLNSLTLSLL 144
           G V DS +  P+P IG+Y+  A+LVC L + +D +L +R  + W PCK FSLN  +L+++
Sbjct: 42  GSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADAFLAFRHTKFWFPCKVFSLNVTSLTII 101

Query: 143 AIATKLPFDLTSPMPSPQDQLSKLCGTTLICISMGFFLPCVANME 9
           A+AT L  DL + MP  QDQLSKL  T L+C  MG F+P +   E
Sbjct: 102 AVATNLSVDLNTSMPRCQDQLSKLSSTVLMCTVMGNFMPSIGTTE 146


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/107 (42%), Positives = 72/107 (67%)
 Frame = -2

Query: 323 GGVLDSRYAAPLPLIGLYITTATLVCLLFIISDVYLGYRRKQPWLPCKYFSLNSLTLSLL 144
           G + D+ ++ PLPLIG+Y+  A+L+C L + +D+  G+R ++ W PCK+FSLN+ +L+ +
Sbjct: 10  GDLNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFI 69

Query: 143 AIATKLPFDLTSPMPSPQDQLSKLCGTTLICISMGFFLPCVANMEGS 3
           A+  KL  DL + MPS QDQL+KL  T  +C  MG  +P +  M+ +
Sbjct: 70  AVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNN 116


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