BLASTX nr result

ID: Coptis24_contig00020233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020233
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538210.1| PREDICTED: crooked neck-like protein 1-like ...    64   1e-08
ref|XP_003517497.1| PREDICTED: crooked neck-like protein 1-like ...    64   1e-08
ref|XP_002870617.1| hypothetical protein ARALYDRAFT_916024 [Arab...    64   1e-08
ref|XP_002509927.1| crooked neck protein, putative [Ricinus comm...    64   1e-08
ref|XP_002299492.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_003538210.1| PREDICTED: crooked neck-like protein 1-like [Glycine max]
          Length = 695

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 4/40 (10%)
 Frame = +3

Query: 225 SLGYYT----QVKLPRPTRVKNKTPAPVQITAEQILREAR 332
           SLGY T    +VKLPRPTRVKNKTPAP+QITAEQILREAR
Sbjct: 10  SLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREAR 49


>ref|XP_003517497.1| PREDICTED: crooked neck-like protein 1-like [Glycine max]
          Length = 695

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 4/40 (10%)
 Frame = +3

Query: 225 SLGYYT----QVKLPRPTRVKNKTPAPVQITAEQILREAR 332
           SLGY T    +VKLPRPTRVKNKTPAP+QITAEQILREAR
Sbjct: 10  SLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREAR 49


>ref|XP_002870617.1| hypothetical protein ARALYDRAFT_916024 [Arabidopsis lyrata subsp.
           lyrata] gi|297316453|gb|EFH46876.1| hypothetical protein
           ARALYDRAFT_916024 [Arabidopsis lyrata subsp. lyrata]
          Length = 704

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/43 (79%), Positives = 36/43 (83%), Gaps = 4/43 (9%)
 Frame = +3

Query: 216 SRESLGYYT----QVKLPRPTRVKNKTPAPVQITAEQILREAR 332
           S  +LGY T    +VKLPRPTRVKNKTPAPVQITAEQILREAR
Sbjct: 8   SDRTLGYMTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREAR 50


>ref|XP_002509927.1| crooked neck protein, putative [Ricinus communis]
           gi|223549826|gb|EEF51314.1| crooked neck protein,
           putative [Ricinus communis]
          Length = 696

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 4/40 (10%)
 Frame = +3

Query: 225 SLGYYT----QVKLPRPTRVKNKTPAPVQITAEQILREAR 332
           SLGY T    +VKLPRPTRVKNKTPAP+QITAEQILREAR
Sbjct: 10  SLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREAR 49


>ref|XP_002299492.1| predicted protein [Populus trichocarpa] gi|222846750|gb|EEE84297.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 4/40 (10%)
 Frame = +3

Query: 225 SLGYYT----QVKLPRPTRVKNKTPAPVQITAEQILREAR 332
           SLGY T    +VKLPRPTRVKNKTPAP+QITAEQILREAR
Sbjct: 10  SLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREAR 49


Top