BLASTX nr result

ID: Coptis24_contig00020228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020228
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    81   8e-14
emb|CBI37809.3| unnamed protein product [Vitis vinifera]               73   2e-11
gb|AFK36768.1| unknown [Lotus japonicus]                               69   4e-10
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...    67   1e-09
gb|ACU01865.1| otubain [Glycine max]                                   67   2e-09

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
 Frame = +3

Query: 15   DGTGGFIALALALGYRKENWIKVQADLLVELSCFKQEYVKMFS----VHGFKNCVENL-S 179
            DG  GF  +A A+G  +E W +V+ D+L EL  +  EY ++F     V    + +E+  S
Sbjct: 592  DGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWDEYAQLFRDPIRVDELIHXLEHFQS 651

Query: 180  KSGTDEFMKMPEAGYLAASKYHTAVVFFSKAKSATFLPLRSA-IPKNGPKVISIGLV-EN 353
             +  D +M MP+ G++ AS+Y+  +V+ S     TFLPLRSA  P    +V+SIG + +N
Sbjct: 652  PADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRRVLSIGFINDN 711

Query: 354  KMLKLKLKTNYPMPEIA 404
              +++ + T  PMP +A
Sbjct: 712  HFVEILMTTGAPMPPVA 728


>emb|CBI37809.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
 Frame = +3

Query: 15  DGTGGFIALALALGYRKENWIKVQADLLVELSCFKQEYVKMFS----VHGFKNCVENL-S 179
           DG  GF  +A A+G  +E W +V+ D+L EL  +  EY ++F     V    + +E+  S
Sbjct: 494 DGNCGFRVIASAMGMGEEGWPQVRRDMLFELRTYWAEYAQLFRDPIRVDELIHVLEHFQS 553

Query: 180 KSGTDEFMKMPEAGYLAASKYHTAVVFFSKAKSATFLPLRSA-IPKNGPKVISIGLVENK 356
            +  D +M MP+ G++ AS+Y+  +V+ S     TFLPLRSA  P    +V+SIG + + 
Sbjct: 554 PADYDRWMTMPDMGHIIASRYNVVLVYISMQLCLTFLPLRSAPTPLPMRRVLSIGFINDN 613

Query: 357 MLKLKLKTNYP 389
                 KT  P
Sbjct: 614 HFVETWKTKTP 624


>gb|AFK36768.1| unknown [Lotus japonicus]
          Length = 179

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
 Frame = +3

Query: 15  DGTGGFIALALALGYRKENWIKVQADLLVELSCFKQEYVKMF-SVHGFKNCVENL----- 176
           DG  GF ALA  LG  + NW +++ DL  EL  F  EYV ++ S+      +++L     
Sbjct: 54  DGNCGFRALAALLGQEEHNWAQIRIDLAKELQEFHHEYVALYGSIERVNQLLDSLYTIPG 113

Query: 177 SKSGTDEFMKMPEAGYLAASKYHTAVVFFSKAKSATFLPLRS-AIPKNGPKVISIGLVEN 353
                D++M +P+ GYL A+K+    +  S     TF PLR    P    K+I++GLV +
Sbjct: 114 MLVTPDKWMSLPDMGYLIATKFKLVFLVLSNCGCITFFPLRGHTSPMRNHKIIAVGLVNS 173


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
 Frame = +3

Query: 12   GDGTGGFIALALALGYRKENWIKVQADLLVELSCFKQEYVKMFSVHGFKNCVENLSKS-- 185
            GD   G+ A+A  LG  +E+W  V+ DL+ EL  ++  Y K+F   G  + V  L KS  
Sbjct: 699  GDSNCGYRAVAAQLGMGEESWALVRQDLIRELQQWQDNYAKLF---GSNDRVAELRKSLY 755

Query: 186  -----GTDEFMKMPEAGYLAASKYHTAVVFFSKAKSATFLPLRSAIP--KNGPKVISIGL 344
                     +M +P+ GY+ AS+Y+  +V  S  +  TF PLR   P  ++  ++ISIG 
Sbjct: 756  VGKQASVASWMTIPDMGYVIASRYNVVLVTLSLQECMTFFPLRGRPPLSQSSHRLISIGF 815

Query: 345  VEN-KMLKLKLKTNYPMPEIA 404
            V     +++ LK +  +P  A
Sbjct: 816  VHKCHFVQVVLKADSAIPPTA 836


>gb|ACU01865.1| otubain [Glycine max]
          Length = 341

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
 Frame = +3

Query: 63  KENWIKVQADLLVELSCFKQEYVKMFS-VHGFKNC-----VENLSKSGTDEFMKMPEAGY 224
           +++W  V+  LL EL+ F ++Y+K+F  +  F+       V+ L+K  TD+++ +   GY
Sbjct: 191 EDSWSVVRNHLLKELAKFSEDYIKLFGGMERFEELRMSLLVDGLTKVTTDKWIDITNMGY 250

Query: 225 LAASKYHTAVVFFSKAKSATFLPLRSAIPKNGP--KVISIGLV-ENKMLKLKLKTNYPMP 395
           + AS+Y+  VV  SK +S TF PLRS    N    ++I I  V +N  +++ LK   P+P
Sbjct: 251 VIASRYNVIVVSLSKQQSMTFFPLRSQPLANSSLHRIICISHVYDNHFVEVYLKERCPLP 310

Query: 396 EIA 404
            +A
Sbjct: 311 SVA 313


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