BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020219
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638304.1| hypothetical protein MTR_126s0013 [Medicago ...    86   4e-15
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...    82   6e-14
ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus commun...    80   2e-13
ref|NP_001044297.1| Os01g0757800 [Oryza sativa Japonica Group] g...    77   1e-12
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]     76   2e-12

>ref|XP_003638304.1| hypothetical protein MTR_126s0013 [Medicago truncatula]
           gi|355504239|gb|AES85442.1| hypothetical protein
           MTR_126s0013 [Medicago truncatula]
          Length = 201

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = -2

Query: 387 QGKQNWSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAHYFLP 226
           QG Q WS+N+++IDPS+IDELPPE QDE R W++P KR N VKRGSSI  YF P
Sbjct: 145 QGSQAWSYNIDEIDPSIIDELPPEIQDEFRTWLRPRKRPNVVKRGSSITQYFRP 198


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = -2

Query: 387 QGKQNWSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAHYFLP 226
           QG+Q+WS+N+ +IDPS+I+ELPPE Q E + W++P KR N  KRGSSI HYF P
Sbjct: 646 QGRQDWSYNINEIDPSIINELPPEIQQEFQIWLRPHKRPNVAKRGSSITHYFSP 699


>ref|XP_002528150.1| DNA polymerase eta, putative [Ricinus communis]
           gi|223532448|gb|EEF34241.1| DNA polymerase eta, putative
           [Ricinus communis]
          Length = 560

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 31/52 (59%), Positives = 45/52 (86%)
 Frame = -2

Query: 381 KQNWSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAHYFLP 226
           +++W++ +++IDPSVI+ELPPE QDEVR W++P KRA  VK+G++IAHYF P
Sbjct: 506 RESWNYKIDEIDPSVINELPPEIQDEVRAWLQPHKRARIVKKGATIAHYFSP 557


>ref|NP_001044297.1| Os01g0757800 [Oryza sativa Japonica Group]
           gi|57900368|dbj|BAD87578.1| putative DNA polymerase
           [Oryza sativa Japonica Group]
           gi|113533828|dbj|BAF06211.1| Os01g0757800 [Oryza sativa
           Japonica Group]
          Length = 642

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/58 (55%), Positives = 45/58 (77%)
 Frame = -2

Query: 372 WSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAHYFLPK*EFKLLSI 199
           W FNVEDIDP+V++ELPPE Q E+ GWI+PPK++++  RGS+I+ YF P   + L +I
Sbjct: 581 WMFNVEDIDPAVVEELPPEIQREIHGWIRPPKQSSSKTRGSTISSYFQPAKSYSLQAI 638


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 31/52 (59%), Positives = 42/52 (80%)
 Frame = -2

Query: 381 KQNWSFNVEDIDPSVIDELPPEFQDEVRGWIKPPKRANTVKRGSSIAHYFLP 226
           ++ WS+ +++IDPSV+DELPPE + EV+ W++P K A T KRGSSIAHYF P
Sbjct: 724 RETWSYKIDEIDPSVMDELPPEIRAEVQAWLRPQKPAKTGKRGSSIAHYFSP 775