BLASTX nr result

ID: Coptis24_contig00020211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020211
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vi...   149   3e-34
emb|CBI32272.3| unnamed protein product [Vitis vinifera]              149   3e-34
gb|AEV43357.1| auxin-response factor [Citrus sinensis]                147   7e-34
ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Gly...   147   9e-34
ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...   145   3e-33

>ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/121 (60%), Positives = 90/121 (74%)
 Frame = -3

Query: 363 VEAFTNQEPSPELPVYDLPSMIPCTVIYVQRKAEMETDEVFVQVTLLPDTEKMKEVLPSG 184
           VEA+TNQ+   E+P+Y+LPS I C V+YVQ KAE  TDEVF QVTLLP+ ++  +    G
Sbjct: 169 VEAYTNQDGQMEMPIYNLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHG 228

Query: 183 FFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEECFPPLNMTQNPPAQELVAKDLH 4
                P+RT   SFSK +T SDT+THGGFSV +RHA+EC PPL+MTQ PP QEL+AKDLH
Sbjct: 229 NSQFFPRRTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLH 288

Query: 3   G 1
           G
Sbjct: 289 G 289


>emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/121 (60%), Positives = 90/121 (74%)
 Frame = -3

Query: 363 VEAFTNQEPSPELPVYDLPSMIPCTVIYVQRKAEMETDEVFVQVTLLPDTEKMKEVLPSG 184
           VEA+TNQ+   E+P+Y+LPS I C V+YVQ KAE  TDEVF QVTLLP+ ++  +    G
Sbjct: 64  VEAYTNQDGQMEMPIYNLPSKIFCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHG 123

Query: 183 FFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEECFPPLNMTQNPPAQELVAKDLH 4
                P+RT   SFSK +T SDT+THGGFSV +RHA+EC PPL+MTQ PP QEL+AKDLH
Sbjct: 124 NSQFFPRRTHSYSFSKTLTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLH 183

Query: 3   G 1
           G
Sbjct: 184 G 184


>gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/121 (61%), Positives = 88/121 (72%)
 Frame = -3

Query: 363 VEAFTNQEPSPELPVYDLPSMIPCTVIYVQRKAEMETDEVFVQVTLLPDTEKMKEVLPSG 184
           VEA TNQ    ++PVYDLPS I C VI VQ KAE +TDEVF QVTLLP++ + +  +   
Sbjct: 78  VEASTNQVADQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKE 137

Query: 183 FFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEECFPPLNMTQNPPAQELVAKDLH 4
             P  P R  V SF K +TASDTSTHGGFSVLRRHA+EC PPL+M++ PP QEL AKDLH
Sbjct: 138 PPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLH 197

Query: 3   G 1
           G
Sbjct: 198 G 198


>ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/121 (61%), Positives = 86/121 (71%)
 Frame = -3

Query: 363 VEAFTNQEPSPELPVYDLPSMIPCTVIYVQRKAEMETDEVFVQVTLLPDTEKMKEVLPSG 184
           VEA TNQ     +PVYDLP  I C VI V  KAE +TDEVF QVTLLP+  + +  +   
Sbjct: 87  VEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPNQDENAVEKE 146

Query: 183 FFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEECFPPLNMTQNPPAQELVAKDLH 4
             P+ P R  V SF K +TASDTSTHGGFSVLRRHA+EC PPL+MT+ PP QELVAKDLH
Sbjct: 147 GPPAAPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAKDLH 206

Query: 3   G 1
           G
Sbjct: 207 G 207


>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
           gi|297734502|emb|CBI15749.3| unnamed protein product
           [Vitis vinifera]
          Length = 862

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/121 (61%), Positives = 86/121 (71%)
 Frame = -3

Query: 363 VEAFTNQEPSPELPVYDLPSMIPCTVIYVQRKAEMETDEVFVQVTLLPDTEKMKEVLPSG 184
           VEA TNQ    ++PVYDLPS I C VI VQ KAE +TDEVF QVTLLP+  + +      
Sbjct: 90  VEASTNQVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKE 149

Query: 183 FFPSLPQRTKVSSFSKIVTASDTSTHGGFSVLRRHAEECFPPLNMTQNPPAQELVAKDLH 4
             P  P R  V SF K +TASDTSTHGGFSVLRRHA+EC P L+M++ PP QELVAKDLH
Sbjct: 150 PLPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLH 209

Query: 3   G 1
           G
Sbjct: 210 G 210


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