BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020207
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro...    70   2e-10
emb|CBI24978.3| unnamed protein product [Vitis vinifera]               70   2e-10
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]    70   2e-10
ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medic...    67   2e-09

>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +1

Query: 7   RKLPEDAHLHSIPKHLRPPITCLAVGMKKVVTTHNSKIIRLWKFNN 144
           ++LP D ++  IPK +RPPITCLAVGM+KV+TTHN K IR+WKFNN
Sbjct: 394 KRLPYDYNIDRIPKTVRPPITCLAVGMQKVITTHNIKNIRMWKFNN 439


>ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Vitis vinifera]
          Length = 421

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 7   RKLPEDAHLHSIPKHLRPPITCLAVGMKKVVTTHNSKIIRLWKFN 141
           R++ ED  + SIPK  RPPITCLAVGM+KVVTTHN K IR+WKF+
Sbjct: 370 RRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKFH 414


>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 7   RKLPEDAHLHSIPKHLRPPITCLAVGMKKVVTTHNSKIIRLWKFN 141
           R++ ED  + SIPK  RPPITCLAVGM+KVVTTHN K IR+WKF+
Sbjct: 384 RRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKFH 428


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 7   RKLPEDAHLHSIPKHLRPPITCLAVGMKKVVTTHNSKIIRLWKFN 141
           R++ ED  + SIPK  RPPITCLAVGM+KVVTTHN K IR+WKF+
Sbjct: 420 RRITEDTLIDSIPKSSRPPITCLAVGMQKVVTTHNGKYIRMWKFH 464


>ref|XP_003599502.1| F-box/WD-40 repeat-containing protein [Medicago truncatula]
           gi|355488550|gb|AES69753.1| F-box/WD-40
           repeat-containing protein [Medicago truncatula]
          Length = 438

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/48 (62%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = +1

Query: 7   RKLPEDAHLH--SIPKHLRPPITCLAVGMKKVVTTHNSKIIRLWKFNN 144
           ++LPED +++  +IP++ RP ITCLAVGMKKVVTTHN++ IRLWKF +
Sbjct: 385 KRLPEDTYINIDAIPRNSRPSITCLAVGMKKVVTTHNTRDIRLWKFKD 432