BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020197
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320339.1| tubulin gamma complex-associated protein [Po...   381   e-103
ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4...   377   e-102
ref|XP_002523094.1| gamma-tubulin complex component, putative [R...   362   4e-98
ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4...   362   7e-98
ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4...   360   2e-97

>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222861112|gb|EEE98654.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 728

 Score =  381 bits (978), Expect = e-103
 Identities = 187/272 (68%), Positives = 222/272 (81%), Gaps = 19/272 (6%)
 Frame = -2

Query: 760 GYTGDLIIPHDS--------------TFKLAPDITFLQTPEREVIERLIKLGYYYKELDG 623
           GYTGDLII                  +FKLAPDI+F+Q  +R++IER+I LG+YY+ELD 
Sbjct: 11  GYTGDLIIDEREHQNSLGIPISDEHRSFKLAPDISFIQPSDRDLIERIISLGFYYRELDR 70

Query: 622 FATNARNLSWV---NNNNEEERKG--SKNSVYRRAIGNGIVEILSIYRSAVLHVEQVLLS 458
           FAT +RNLSW+   N NNE   K    K SVYRRAI NGIVEILS+YRSAVLH+EQ LLS
Sbjct: 71  FATKSRNLSWIRSANPNNELSNKNVQDKQSVYRRAIANGIVEILSVYRSAVLHIEQKLLS 130

Query: 457 DPVPILASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCGVPELQACIQ 278
           + +PILA++TQGLNKFFVLLPPL+EL++EIERDD+RGGQLLNLLHKRCHCGVPELQ+CIQ
Sbjct: 131 ESIPILATITQGLNKFFVLLPPLYELVLEIERDDIRGGQLLNLLHKRCHCGVPELQSCIQ 190

Query: 277 RLLWHGHQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIAKSVQKSPED 98
           RLLWHGHQVMY+QLASW+VYGILQDQ+GEFFIRRQED  VE+   + +M  K  + S +D
Sbjct: 191 RLLWHGHQVMYNQLASWVVYGILQDQHGEFFIRRQEDRDVEHGSSNQDMSEKLARLSTDD 250

Query: 97  ASLTDWHLGFHIYLDMLPDYIHMRVAESVLFS 2
           ASLTDWHLGFHI+LDMLP+Y+HMRVAES+LF+
Sbjct: 251 ASLTDWHLGFHIFLDMLPEYVHMRVAESILFA 282


>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis
           vinifera] gi|297743902|emb|CBI36872.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score =  377 bits (968), Expect = e-102
 Identities = 187/281 (66%), Positives = 219/281 (77%), Gaps = 28/281 (9%)
 Frame = -2

Query: 760 GYTGDLIIPH-------------------DSTFKLAPDITFLQTPEREVIERLIKLGYYY 638
           GYTGDLII                     D TFKLAPD++F+   ER++IE++I LG+YY
Sbjct: 11  GYTGDLIIDEREQHKSLGINLSPDAPVSEDRTFKLAPDLSFIHPSERDLIEKVITLGFYY 70

Query: 637 KELDGFATNARNLSWVNNNNEE---------ERKGSKNSVYRRAIGNGIVEILSIYRSAV 485
           +ELD FAT +R+LSW+ + N           + K  K+S Y RAI NGIVEILS+YRSAV
Sbjct: 71  RELDRFATKSRDLSWIRSTNVSPLSRTSELLKGKPQKSSAYGRAIANGIVEILSVYRSAV 130

Query: 484 LHVEQVLLSDPVPILASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCG 305
           LH+EQ+LLSDP PILA+V QGLNKFFVLLPPL+ELI+EIERDD+ GGQLLNLLHKRCHCG
Sbjct: 131 LHIEQILLSDPTPILATVIQGLNKFFVLLPPLYELILEIERDDICGGQLLNLLHKRCHCG 190

Query: 304 VPELQACIQRLLWHGHQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIA 125
           VPELQACIQRLLWHGHQVMY+QLASWMVYGILQDQ+GEFFIRRQED  VE+     +M+ 
Sbjct: 191 VPELQACIQRLLWHGHQVMYNQLASWMVYGILQDQHGEFFIRRQEDRDVEHEASPSDMVE 250

Query: 124 KSVQKSPEDASLTDWHLGFHIYLDMLPDYIHMRVAESVLFS 2
           K  + S +DASLTDWHLGFHI+LDMLPDYIHMRVAES+LF+
Sbjct: 251 KLARMSTDDASLTDWHLGFHIFLDMLPDYIHMRVAESILFA 291


>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223537656|gb|EEF39279.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 756

 Score =  362 bits (930), Expect = 4e-98
 Identities = 182/282 (64%), Positives = 213/282 (75%), Gaps = 29/282 (10%)
 Frame = -2

Query: 760 GYTGDLIIPH-------------------DSTFKLAPDITFLQTPEREVIERLIKLGYYY 638
           GYTGDLII                     + +FKLAPDI+F+   +R++IER+I LG+YY
Sbjct: 11  GYTGDLIIDERGHQKSIGVHLSPDASISDERSFKLAPDISFIDPSDRDLIERIITLGFYY 70

Query: 637 KELDGFATNARNLSWVNNNN----------EEERKGSKNSVYRRAIGNGIVEILSIYRSA 488
           +ELD FAT +RNLSW+ + N                 K SVYRRAI NGIVEILS+YRSA
Sbjct: 71  RELDRFATKSRNLSWIRSTNVSPLSRANELSSNNNTQKQSVYRRAIANGIVEILSVYRSA 130

Query: 487 VLHVEQVLLSDPVPILASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHC 308
           VLH+EQ LLS+ VPILA+VTQGLNKFFVLLPPL+EL++EIERDD+RGGQLLNLLHKR HC
Sbjct: 131 VLHIEQKLLSETVPILATVTQGLNKFFVLLPPLYELVLEIERDDIRGGQLLNLLHKRSHC 190

Query: 307 GVPELQACIQRLLWHGHQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMI 128
           GVPELQ CIQRLLWHGHQVMY+QLASWMVYGILQDQ+GEFFI RQED  + N+    +M 
Sbjct: 191 GVPELQTCIQRLLWHGHQVMYNQLASWMVYGILQDQHGEFFITRQEDRDLVNSSAQPDMS 250

Query: 127 AKSVQKSPEDASLTDWHLGFHIYLDMLPDYIHMRVAESVLFS 2
            K  + S +D SLTDWHLGFHI+LDMLP+YIHM VAESVLF+
Sbjct: 251 EKLARLSTDDISLTDWHLGFHIFLDMLPEYIHMCVAESVLFA 292


>ref|XP_003536108.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
          Length = 732

 Score =  362 bits (928), Expect = 7e-98
 Identities = 178/266 (66%), Positives = 213/266 (80%), Gaps = 13/266 (4%)
 Frame = -2

Query: 760 GYTGDLIIP------------HDSTFKLAPDITFLQTPEREVIERLIKLGYYYKELDGFA 617
           GYTGDLII              + TFKLAPDI F+   +RE+IER+I LG+YY+E++ F+
Sbjct: 11  GYTGDLIIDGRDQLTAETPISDECTFKLAPDIPFIDPSDRELIERIIVLGFYYREMERFS 70

Query: 616 TNARNLSWVNNNNEEE-RKGSKNSVYRRAIGNGIVEILSIYRSAVLHVEQVLLSDPVPIL 440
              R+LSW+ + N +   K  K SVYRRA+ +GIVEILS+YRSAVLH+EQ LLS+ +PIL
Sbjct: 71  AKCRDLSWIRSANAKPLEKKEKGSVYRRALASGIVEILSVYRSAVLHIEQKLLSETMPIL 130

Query: 439 ASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCGVPELQACIQRLLWHG 260
           A+VTQGLNKF  LLPPL+ELI+EIERDD+RGGQLLNLLHKRCHCGVPELQ C+QRLLWHG
Sbjct: 131 ATVTQGLNKFLCLLPPLYELILEIERDDIRGGQLLNLLHKRCHCGVPELQTCMQRLLWHG 190

Query: 259 HQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIAKSVQKSPEDASLTDW 80
           HQVMY+QLASW+VYGILQDQYGEFFIRRQED  VEN+    ++  K  + S +DASLTDW
Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLARMSTDDASLTDW 250

Query: 79  HLGFHIYLDMLPDYIHMRVAESVLFS 2
           HLGFHI LDMLP+YI MRVAES+LF+
Sbjct: 251 HLGFHISLDMLPEYIPMRVAESILFA 276


>ref|XP_003518990.1| PREDICTED: gamma-tubulin complex component 4 homolog [Glycine max]
          Length = 733

 Score =  360 bits (925), Expect = 2e-97
 Identities = 178/266 (66%), Positives = 212/266 (79%), Gaps = 13/266 (4%)
 Frame = -2

Query: 760 GYTGDLIIP------------HDSTFKLAPDITFLQTPEREVIERLIKLGYYYKELDGFA 617
           GYTGDLII             ++ TFKLAPDI+F+   +RE+IER+I LG+YY+E++ F+
Sbjct: 11  GYTGDLIIDRRDHLTADTPISYECTFKLAPDISFIDPSDRELIERIIVLGFYYREMERFS 70

Query: 616 TNARNLSWVNNNNEEE-RKGSKNSVYRRAIGNGIVEILSIYRSAVLHVEQVLLSDPVPIL 440
              R+LSW+ + N     K  K SVYRRA+ NGIVEILS+YRSAVLH+EQ LLS+ +PIL
Sbjct: 71  GKCRDLSWIRSANANPLEKKEKGSVYRRALANGIVEILSVYRSAVLHIEQKLLSENMPIL 130

Query: 439 ASVTQGLNKFFVLLPPLHELIVEIERDDVRGGQLLNLLHKRCHCGVPELQACIQRLLWHG 260
           A+VTQGLNKF  LLPPL+ELI+EIE DD+RGGQLLNLLHKRCHCGVPELQ C+QRLLWHG
Sbjct: 131 ATVTQGLNKFLCLLPPLYELILEIEHDDIRGGQLLNLLHKRCHCGVPELQTCMQRLLWHG 190

Query: 259 HQVMYHQLASWMVYGILQDQYGEFFIRRQEDMGVENAPFSLEMIAKSVQKSPEDASLTDW 80
           HQVMY+QLASW+VYGILQDQYGEFFIRRQED  VEN+    ++  K    S +DASLTDW
Sbjct: 191 HQVMYNQLASWIVYGILQDQYGEFFIRRQEDRDVENSSSHPDISEKLACMSTDDASLTDW 250

Query: 79  HLGFHIYLDMLPDYIHMRVAESVLFS 2
           HLGFHI LDMLP+YI MRVAES+LF+
Sbjct: 251 HLGFHISLDMLPEYIPMRVAESILFA 276