BLASTX nr result

ID: Coptis24_contig00020191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020191
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140603.1| PREDICTED: probable receptor protein kinase ...   328   1e-87
ref|XP_004162388.1| PREDICTED: LOW QUALITY PROTEIN: probable rec...   326   6e-87
ref|XP_002268601.2| PREDICTED: probable receptor protein kinase ...   308   1e-81
emb|CBI39471.3| unnamed protein product [Vitis vinifera]              308   1e-81
ref|XP_003552433.1| PREDICTED: probable receptor protein kinase ...   307   3e-81

>ref|XP_004140603.1| PREDICTED: probable receptor protein kinase TMK1-like [Cucumis
            sativus]
          Length = 930

 Score =  328 bits (841), Expect = 1e-87
 Identities = 164/297 (55%), Positives = 201/297 (67%)
 Frame = +1

Query: 112  FTHADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXX 291
            F  ADDS+++ + + A+SPTPS W + T  C+ W  +RCDSSSRVTSI+L+S+SL G   
Sbjct: 21   FASADDSAVIQKLAAALSPTPSGWSSNTPFCS-WKEIRCDSSSRVTSINLASKSLSGVLP 79

Query: 292  XXXXXXXXXXXXXXXXXHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALS 471
                               +GP+PSFANLS LQ L+LD+NNF+SV    F GLT+LQ LS
Sbjct: 80   SDLNSLSQLTSLSLQRNSLTGPIPSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQVLS 139

Query: 472  LSLNINLSPWVFPQDLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVL 651
            L+ N+NL+PW  P DL Q+  LV+L A N N++GSLPD F  F SLQ +RLSYNNLTGVL
Sbjct: 140  LTQNVNLAPWSIPTDLTQASSLVSLYAGNANIVGSLPDFFDSFASLQELRLSYNNLTGVL 199

Query: 652  PSSFNGTGVQNLWLNNQMXXXXXXXXXXXTMAQLSQVWLQKNSFTGPIPDLSKCVNLFDL 831
            P S  G+G+++LWLNNQ+           +M QLSQVWLQKN FTG IPD SKC  LFDL
Sbjct: 200  PKSLGGSGIKSLWLNNQLNGLSGSIDLLSSMTQLSQVWLQKNQFTGQIPDFSKCEGLFDL 259

Query: 832  QLRDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKP 1002
            QLRDNQ TG+VPPSLMS+  L NVSLDNN LQGP P F + V  T  ++N FC   P
Sbjct: 260  QLRDNQFTGIVPPSLMSLSSLLNVSLDNNKLQGPLPVFDSRVQATFSSVNRFCKTTP 316



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 18/230 (7%)
 Frame = +1

Query: 349 SGPLPSFANLSNLQQLFLDSNNFTS-VPA-SCFSGLTTLQALSLSLNINLSPWVFPQDLI 522
           SG +   ++++ L Q++L  N FT  +P  S   GL  LQ     L  N    + P  L+
Sbjct: 221 SGSIDLLSSMTQLSQVWLQKNQFTGQIPDFSKCEGLFDLQ-----LRDNQFTGIVPPSLM 275

Query: 523 QSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSSFNGT---------- 672
               L+N+S  N  + G LP    +   +Q+   S N      P   +            
Sbjct: 276 SLSSLLNVSLDNNKLQGPLPVFDSR---VQATFSSVNRFCKTTPDPCDAQVSVLLAVAGA 332

Query: 673 -----GVQNLWLNNQMXXXXXXXXXXXTMAQLSQVWLQKNSFTGPI-PDLSKCVNLFDLQ 834
                 + + W  N +           T  +++ V   K    G I P  +   +L +L 
Sbjct: 333 FGYPISLADAWEGNNVCLDWSFVIC--TEGKVTTVNFGKQHLVGVISPAFANLTSLKNLY 390

Query: 835 LRDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINN 984
           L DN L G +P SL ++ QL+N+ + NNNL G  P+F    TV + T  N
Sbjct: 391 LNDNNLVGEIPESLTTLTQLQNLDVSNNNLSGQVPKF--ATTVRLNTKGN 438


>ref|XP_004162388.1| PREDICTED: LOW QUALITY PROTEIN: probable receptor protein kinase
            TMK1-like [Cucumis sativus]
          Length = 930

 Score =  326 bits (835), Expect = 6e-87
 Identities = 163/297 (54%), Positives = 200/297 (67%)
 Frame = +1

Query: 112  FTHADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXX 291
            F  ADDS+++ + + A+SP PS W + T  C+ W  +RCDSSSRVTSI+L+S+SL G   
Sbjct: 21   FASADDSAVIQKLAAALSPXPSGWSSNTPFCS-WKEIRCDSSSRVTSINLASKSLSGVLP 79

Query: 292  XXXXXXXXXXXXXXXXXHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALS 471
                               +GP+PSFANLS LQ L+LD+NNF+SV    F GLT+LQ LS
Sbjct: 80   SDLNSLSQLTSLSLQRNSLTGPIPSFANLSFLQSLYLDNNNFSSVSPGAFQGLTSLQVLS 139

Query: 472  LSLNINLSPWVFPQDLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVL 651
            L+ N+NL+PW  P DL Q+  LV+L A N N++GSLPD F  F SLQ +RLSYNNLTGVL
Sbjct: 140  LTQNVNLAPWSIPTDLTQASSLVSLYAGNANIVGSLPDFFDSFASLQELRLSYNNLTGVL 199

Query: 652  PSSFNGTGVQNLWLNNQMXXXXXXXXXXXTMAQLSQVWLQKNSFTGPIPDLSKCVNLFDL 831
            P S  G+G+++LWLNNQ+           +M QLSQVWLQKN FTG IPD SKC  LFDL
Sbjct: 200  PKSLGGSGIKSLWLNNQLNGLSGSIDLLSSMTQLSQVWLQKNQFTGQIPDFSKCEGLFDL 259

Query: 832  QLRDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKP 1002
            QLRDNQ TG+VPPSLMS+  L NVSLDNN LQGP P F + V  T  ++N FC   P
Sbjct: 260  QLRDNQFTGIVPPSLMSLSSLLNVSLDNNKLQGPLPVFDSRVQATFSSVNRFCKTTP 316



 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 18/230 (7%)
 Frame = +1

Query: 349 SGPLPSFANLSNLQQLFLDSNNFTS-VPA-SCFSGLTTLQALSLSLNINLSPWVFPQDLI 522
           SG +   ++++ L Q++L  N FT  +P  S   GL  LQ     L  N    + P  L+
Sbjct: 221 SGSIDLLSSMTQLSQVWLQKNQFTGQIPDFSKCEGLFDLQ-----LRDNQFTGIVPPSLM 275

Query: 523 QSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSSFNGT---------- 672
               L+N+S  N  + G LP    +   +Q+   S N      P   +            
Sbjct: 276 SLSSLLNVSLDNNKLQGPLPVFDSR---VQATFSSVNRFCKTTPDPCDAQVSVLLAVAGA 332

Query: 673 -----GVQNLWLNNQMXXXXXXXXXXXTMAQLSQVWLQKNSFTGPI-PDLSKCVNLFDLQ 834
                 + + W  N +           T  +++ V   K    G I P  +   +L +L 
Sbjct: 333 FGYPISLADAWEGNNVCLDWSFVIC--TEGKVTTVNFGKQHLVGVISPAFANLTSLKNLY 390

Query: 835 LRDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINN 984
           L DN L G +P SL ++ QL+N+ + NNNL G  P+F    TV + T  N
Sbjct: 391 LNDNNLVGEIPESLTTLTQLQNLDVSNNNLSGQVPKF--ATTVRLNTKGN 438


>ref|XP_002268601.2| PREDICTED: probable receptor protein kinase TMK1-like [Vitis
            vinifera]
          Length = 926

 Score =  308 bits (789), Expect = 1e-81
 Identities = 156/296 (52%), Positives = 198/296 (66%)
 Frame = +1

Query: 115  THADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXX 294
            T AD+++ M + + A+SPTPS W +GTN C  WSGV+CD+  +V SI+L+S+SL G    
Sbjct: 25   TTADEAAFMTKLAAALSPTPSGW-SGTNHCK-WSGVKCDAIGQVISINLASRSLSGMLPS 82

Query: 295  XXXXXXXXXXXXXXXXHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSL 474
                              SGPLPS +NL++LQ +FLD+NNF+SVP     GL +LQ  S+
Sbjct: 83   DINQLPQLQALSLQKNQLSGPLPSLSNLTSLQSVFLDNNNFSSVPPEFLLGLNSLQTFSI 142

Query: 475  SLNINLSPWVFPQDLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLP 654
            S N +L PW  P+ L +S  L +L ASN N+ G++P+IFG F +LQSVRLSYNNLTG LP
Sbjct: 143  SENPSLQPWRIPEHLSESTSLASLLASNANIFGTIPEIFGSFPNLQSVRLSYNNLTGPLP 202

Query: 655  SSFNGTGVQNLWLNNQMXXXXXXXXXXXTMAQLSQVWLQKNSFTGPIPDLSKCVNLFDLQ 834
             SF G+G+QNLWLNNQ             M QLSQ WL  N+F+GPIPDLS    +FDLQ
Sbjct: 203  PSFGGSGIQNLWLNNQKVGLSGRLDVLGAMVQLSQAWLHANAFSGPIPDLSNSSAIFDLQ 262

Query: 835  LRDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKP 1002
            LRDNQLTG++ PSL S  +L N+SL NN LQGPYP F   V VT+G+ NNFCNP+P
Sbjct: 263  LRDNQLTGVLLPSLFSHPRLVNISLQNNKLQGPYPNFSKTVEVTLGSTNNFCNPQP 318


>emb|CBI39471.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  308 bits (789), Expect = 1e-81
 Identities = 156/296 (52%), Positives = 198/296 (66%)
 Frame = +1

Query: 115  THADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXX 294
            T AD+++ M + + A+SPTPS W +GTN C  WSGV+CD+  +V SI+L+S+SL G    
Sbjct: 25   TTADEAAFMTKLAAALSPTPSGW-SGTNHCK-WSGVKCDAIGQVISINLASRSLSGMLPS 82

Query: 295  XXXXXXXXXXXXXXXXHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSL 474
                              SGPLPS +NL++LQ +FLD+NNF+SVP     GL +LQ  S+
Sbjct: 83   DINQLPQLQALSLQKNQLSGPLPSLSNLTSLQSVFLDNNNFSSVPPEFLLGLNSLQTFSI 142

Query: 475  SLNINLSPWVFPQDLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLP 654
            S N +L PW  P+ L +S  L +L ASN N+ G++P+IFG F +LQSVRLSYNNLTG LP
Sbjct: 143  SENPSLQPWRIPEHLSESTSLASLLASNANIFGTIPEIFGSFPNLQSVRLSYNNLTGPLP 202

Query: 655  SSFNGTGVQNLWLNNQMXXXXXXXXXXXTMAQLSQVWLQKNSFTGPIPDLSKCVNLFDLQ 834
             SF G+G+QNLWLNNQ             M QLSQ WL  N+F+GPIPDLS    +FDLQ
Sbjct: 203  PSFGGSGIQNLWLNNQKVGLSGRLDVLGAMVQLSQAWLHANAFSGPIPDLSNSSAIFDLQ 262

Query: 835  LRDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFCNPKP 1002
            LRDNQLTG++ PSL S  +L N+SL NN LQGPYP F   V VT+G+ NNFCNP+P
Sbjct: 263  LRDNQLTGVLLPSLFSHPRLVNISLQNNKLQGPYPNFSKTVEVTLGSTNNFCNPQP 318


>ref|XP_003552433.1| PREDICTED: probable receptor protein kinase TMK1-like isoform 2
           [Glycine max]
          Length = 928

 Score =  307 bits (786), Expect = 3e-81
 Identities = 158/291 (54%), Positives = 197/291 (67%), Gaps = 1/291 (0%)
 Frame = +1

Query: 121 ADDSSIMAEFSQAISPTPSTWKAGTNPCNGWSGVRCDSSSRVTSIDLSSQSLQGSXXXXX 300
           ADD   M++ ++A+ P+PS W  G++ C  W+GV+C S++RVT I ++SQSL G+     
Sbjct: 30  ADDGVFMSKLAKALIPSPSGW-TGSSFCQ-WTGVKC-SANRVTIIKIASQSLGGTLPPDL 86

Query: 301 XXXXXXXXXXXXXXHFSGPLPSFANLSNLQQLFLDSNNFTSVPASCFSGLTTLQALSLSL 480
                           SG LPS ANLS L+ +FLD NNFTS+P  CF GLT+LQ LS++ 
Sbjct: 87  NSLSQLTSLSLQNNKLSGALPSLANLSMLESVFLDGNNFTSIPDGCFQGLTSLQTLSMAD 146

Query: 481 NINLSPWVFPQDLIQSEGLVNLSASNVNMMGSLPDIFGKFLSLQSVRLSYNNLTGVLPSS 660
           ++NL+PW  P +L  S  LV L   N N++G+LPD+F KF+SLQ +RLSYNNLTG LP S
Sbjct: 147 SVNLAPWTIPTELTDSNNLVKLDLGNANLIGTLPDVFDKFVSLQELRLSYNNLTGGLPKS 206

Query: 661 FNGTGVQNLWLNNQM-XXXXXXXXXXXTMAQLSQVWLQKNSFTGPIPDLSKCVNLFDLQL 837
           F G+ +QNLWLNNQ             +M  LSQVWLQKN FTGPIPDLS C  LFDLQL
Sbjct: 207 FGGSEIQNLWLNNQNGFGFSGSIEVLASMTHLSQVWLQKNQFTGPIPDLSNCTTLFDLQL 266

Query: 838 RDNQLTGMVPPSLMSMLQLRNVSLDNNNLQGPYPEFGNGVTVTIGTINNFC 990
           RDNQLTG+VPPSLMS+  L+NVSLDNN LQGP P F  GV  T+  IN+FC
Sbjct: 267 RDNQLTGVVPPSLMSLSSLQNVSLDNNALQGPVPSFEKGVKFTLDGINSFC 317


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