BLASTX nr result
ID: Coptis24_contig00020185
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020185 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004165245.1| PREDICTED: uncharacterized protein At3g15000... 67 1e-09 ref|XP_004150496.1| PREDICTED: uncharacterized protein At3g15000... 67 1e-09 ref|XP_002272388.1| PREDICTED: uncharacterized protein At3g15000... 66 3e-09 gb|AFK37344.1| unknown [Medicago truncatula] 64 1e-08 gb|AFK34838.1| unknown [Medicago truncatula] 64 1e-08 >ref|XP_004165245.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Cucumis sativus] Length = 277 Score = 67.4 bits (163), Expect = 1e-09 Identities = 32/47 (68%), Positives = 36/47 (76%) Frame = +3 Query: 177 ILNKNQNMIHDSRKIPSTPRFKTSGSGYSPLNDPSPNWSNRPPKETI 317 +LN+ +I S +P RFK SGSGYSPLNDPSPNWSNRPPKETI Sbjct: 45 LLNRQDQIIPASFNLPI--RFKASGSGYSPLNDPSPNWSNRPPKETI 89 >ref|XP_004150496.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Cucumis sativus] Length = 277 Score = 67.4 bits (163), Expect = 1e-09 Identities = 32/47 (68%), Positives = 36/47 (76%) Frame = +3 Query: 177 ILNKNQNMIHDSRKIPSTPRFKTSGSGYSPLNDPSPNWSNRPPKETI 317 +LN+ +I S +P RFK SGSGYSPLNDPSPNWSNRPPKETI Sbjct: 45 LLNRQDQIIPASFNLPI--RFKASGSGYSPLNDPSPNWSNRPPKETI 89 >ref|XP_002272388.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial [Vitis vinifera] gi|147819172|emb|CAN69219.1| hypothetical protein VITISV_012015 [Vitis vinifera] gi|296083326|emb|CBI22962.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 66.2 bits (160), Expect = 3e-09 Identities = 29/40 (72%), Positives = 35/40 (87%) Frame = +3 Query: 198 MIHDSRKIPSTPRFKTSGSGYSPLNDPSPNWSNRPPKETI 317 ++ +S ++P+ R KTSGSGYSPLNDPSPNWSNRPPKETI Sbjct: 47 LVSNSARVPT--RLKTSGSGYSPLNDPSPNWSNRPPKETI 84 >gb|AFK37344.1| unknown [Medicago truncatula] Length = 263 Score = 63.9 bits (154), Expect = 1e-08 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = +3 Query: 234 RFKTSGSGYSPLNDPSPNWSNRPPKETI 317 RFK+SGSGYSPLNDPSPNWSNRPPKETI Sbjct: 55 RFKSSGSGYSPLNDPSPNWSNRPPKETI 82 >gb|AFK34838.1| unknown [Medicago truncatula] Length = 263 Score = 63.9 bits (154), Expect = 1e-08 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = +3 Query: 234 RFKTSGSGYSPLNDPSPNWSNRPPKETI 317 RFK+SGSGYSPLNDPSPNWSNRPPKETI Sbjct: 55 RFKSSGSGYSPLNDPSPNWSNRPPKETI 82