BLASTX nr result

ID: Coptis24_contig00020185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020185
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165245.1| PREDICTED: uncharacterized protein At3g15000...    67   1e-09
ref|XP_004150496.1| PREDICTED: uncharacterized protein At3g15000...    67   1e-09
ref|XP_002272388.1| PREDICTED: uncharacterized protein At3g15000...    66   3e-09
gb|AFK37344.1| unknown [Medicago truncatula]                           64   1e-08
gb|AFK34838.1| unknown [Medicago truncatula]                           64   1e-08

>ref|XP_004165245.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus]
          Length = 277

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = +3

Query: 177 ILNKNQNMIHDSRKIPSTPRFKTSGSGYSPLNDPSPNWSNRPPKETI 317
           +LN+   +I  S  +P   RFK SGSGYSPLNDPSPNWSNRPPKETI
Sbjct: 45  LLNRQDQIIPASFNLPI--RFKASGSGYSPLNDPSPNWSNRPPKETI 89


>ref|XP_004150496.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial-like
           [Cucumis sativus]
          Length = 277

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = +3

Query: 177 ILNKNQNMIHDSRKIPSTPRFKTSGSGYSPLNDPSPNWSNRPPKETI 317
           +LN+   +I  S  +P   RFK SGSGYSPLNDPSPNWSNRPPKETI
Sbjct: 45  LLNRQDQIIPASFNLPI--RFKASGSGYSPLNDPSPNWSNRPPKETI 89


>ref|XP_002272388.1| PREDICTED: uncharacterized protein At3g15000, mitochondrial [Vitis
           vinifera] gi|147819172|emb|CAN69219.1| hypothetical
           protein VITISV_012015 [Vitis vinifera]
           gi|296083326|emb|CBI22962.3| unnamed protein product
           [Vitis vinifera]
          Length = 260

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +3

Query: 198 MIHDSRKIPSTPRFKTSGSGYSPLNDPSPNWSNRPPKETI 317
           ++ +S ++P+  R KTSGSGYSPLNDPSPNWSNRPPKETI
Sbjct: 47  LVSNSARVPT--RLKTSGSGYSPLNDPSPNWSNRPPKETI 84


>gb|AFK37344.1| unknown [Medicago truncatula]
          Length = 263

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 234 RFKTSGSGYSPLNDPSPNWSNRPPKETI 317
           RFK+SGSGYSPLNDPSPNWSNRPPKETI
Sbjct: 55  RFKSSGSGYSPLNDPSPNWSNRPPKETI 82


>gb|AFK34838.1| unknown [Medicago truncatula]
          Length = 263

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 234 RFKTSGSGYSPLNDPSPNWSNRPPKETI 317
           RFK+SGSGYSPLNDPSPNWSNRPPKETI
Sbjct: 55  RFKSSGSGYSPLNDPSPNWSNRPPKETI 82


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