BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020175
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26532.3| unnamed protein product [Vitis vinifera]              177   1e-42
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat...   177   1e-42
emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]   177   1e-42
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat...   170   2e-40
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat...   169   4e-40

>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  177 bits (450), Expect = 1e-42
 Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 31/193 (16%)
 Frame = -1

Query: 489 TFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLC--------------- 355
           TFNI+I+GLC +GYTG A SL+R LQ  GF   + TYN+LIN LC               
Sbjct: 133 TFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILREL 192

Query: 354 ----------T*CVYLYYC------DQGFEIFMEMKSKGYNFDSFGYCTVISVLAKLGLT 223
                     T    +  C      +QGFEIF EMKSKGY FD+F YC VI+ L K G  
Sbjct: 193 GESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRL 252

Query: 222 REANYCIGEMVRNGIGLDLVAYNTLFNVYCREGKLENAFGLANELQKCGMESDQYTHTIL 43
            EAN  + +M R+ I LD+V+YNT+ N+YCR GKLE  + L +E+++ G+E D+YTHTIL
Sbjct: 253 EEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTIL 312

Query: 42  VDGMCRSGDMDGA 4
           +DG+C++G+++GA
Sbjct: 313 IDGLCKAGNVEGA 325


>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Vitis vinifera]
          Length = 457

 Score =  177 bits (450), Expect = 1e-42
 Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 31/193 (16%)
 Frame = -1

Query: 489 TFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLC--------------- 355
           TFNI+I+GLC +GYTG A SL+R LQ  GF   + TYN+LIN LC               
Sbjct: 149 TFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILREL 208

Query: 354 ----------T*CVYLYYC------DQGFEIFMEMKSKGYNFDSFGYCTVISVLAKLGLT 223
                     T    +  C      +QGFEIF EMKSKGY FD+F YC VI+ L K G  
Sbjct: 209 GESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRL 268

Query: 222 REANYCIGEMVRNGIGLDLVAYNTLFNVYCREGKLENAFGLANELQKCGMESDQYTHTIL 43
            EAN  + +M R+ I LD+V+YNT+ N+YCR GKLE  + L +E+++ G+E D+YTHTIL
Sbjct: 269 EEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTIL 328

Query: 42  VDGMCRSGDMDGA 4
           +DG+C++G+++GA
Sbjct: 329 IDGLCKAGNVEGA 341



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 42/163 (25%), Positives = 74/163 (45%)
 Frame = -1

Query: 492 ITFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLCT*CVYLYYCDQGFE 313
           +T+N L+    R      A+S+  +++E G    + TYN LI      C+      +  +
Sbjct: 43  VTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLL----SRSLD 98

Query: 312 IFMEMKSKGYNFDSFGYCTVISVLAKLGLTREANYCIGEMVRNGIGLDLVAYNTLFNVYC 133
           +F EM   G   D + Y +++    KLG   EAN    +++   +      +N + N  C
Sbjct: 99  LFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLC 158

Query: 132 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGA 4
             G    A  L   LQ+ G   +  T+ IL++G+C+S  ++ A
Sbjct: 159 NNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAA 201


>emb|CAN63846.1| hypothetical protein VITISV_010038 [Vitis vinifera]
          Length = 457

 Score =  177 bits (450), Expect = 1e-42
 Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 31/193 (16%)
 Frame = -1

Query: 489 TFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLC--------------- 355
           TFNI+I+GLC +GYTG A SL+R LQ  GF   + TYN+LIN LC               
Sbjct: 149 TFNIMINGLCNNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAARRILREL 208

Query: 354 ----------T*CVYLYYC------DQGFEIFMEMKSKGYNFDSFGYCTVISVLAKLGLT 223
                     T    +  C      +QGFEIF EMKSKGY FD+F YC VI+ L K G  
Sbjct: 209 GESGNVPDAITYTTVMKCCFRSRQFEQGFEIFSEMKSKGYAFDAFSYCAVIAALTKTGRL 268

Query: 222 REANYCIGEMVRNGIGLDLVAYNTLFNVYCREGKLENAFGLANELQKCGMESDQYTHTIL 43
            EAN  + +M R+ I LD+V+YNT+ N+YCR GKLE  + L +E+++ G+E D+YTHTIL
Sbjct: 269 EEANDIMEQMARSDIDLDIVSYNTVMNLYCRNGKLEATYKLLDEIEEHGLECDEYTHTIL 328

Query: 42  VDGMCRSGDMDGA 4
           +DG+C++G+++GA
Sbjct: 329 IDGLCKAGNVEGA 341



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 42/163 (25%), Positives = 74/163 (45%)
 Frame = -1

Query: 492 ITFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLCT*CVYLYYCDQGFE 313
           +T+N L+    R      A+S+  +++E G    + TYN LI      C+      +  +
Sbjct: 43  VTYNTLLSAYSRFVGIDAAYSVIHRMKEAGISPDVITYNSLIAAATKRCLL----SRSLD 98

Query: 312 IFMEMKSKGYNFDSFGYCTVISVLAKLGLTREANYCIGEMVRNGIGLDLVAYNTLFNVYC 133
           +F EM   G   D + Y +++    KLG   EAN    +++   +      +N + N  C
Sbjct: 99  LFEEMLRTGIRPDVWSYNSLMHCFFKLGKPDEANRVFQDIILTNLLPSSSTFNIMINGLC 158

Query: 132 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRSGDMDGA 4
             G    A  L   LQ+ G   +  T+ IL++G+C+S  ++ A
Sbjct: 159 NNGYTGYALSLYRYLQRQGFVPELVTYNILINGLCKSRKLNAA 201


>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  170 bits (430), Expect = 2e-40
 Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 31/194 (15%)
 Frame = -1

Query: 489 TFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLC--------------- 355
           T+NI+I+GLC++GY G A SLFR LQ HGF   + TYN LIN LC               
Sbjct: 154 TYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEF 213

Query: 354 ----------------T*CVYLYYCDQGFEIFMEMKSKGYNFDSFGYCTVISVLAKLGLT 223
                           T C      ++G EI  EM+S G+ FD F YCTVI+ + K G  
Sbjct: 214 GETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLGFTFDGFAYCTVIAAMIKTGRM 273

Query: 222 REANYCIGEMVRNGIGLDLVAYNTLFNVYCREGKLENAFGLANELQKCGMESDQYTHTIL 43
           +EA   +  MV +G+  DLV+YNTL N+YCR+G+L++A  L +E++  G+E DQYTHTI+
Sbjct: 274 QEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTII 333

Query: 42  VDGMCRSGDMDGAE 1
           VDG+C++G+ DGA+
Sbjct: 334 VDGLCKAGNFDGAQ 347



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 42/157 (26%), Positives = 78/157 (49%)
 Frame = -1

Query: 492 ITFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLCT*CVYLYYCDQGFE 313
           +T+N LI   CR     VA+S+  ++ + G    + ++N LI+      ++     +  +
Sbjct: 49  VTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLF----SKSLD 104

Query: 312 IFMEMKSKGYNFDSFGYCTVISVLAKLGLTREANYCIGEMVRNGIGLDLVAYNTLFNVYC 133
           +F EM  +G N D++ +  +++ L +LG   EAN    E+V     +    YN + N  C
Sbjct: 105 LFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRD-EVHPATYNIMINGLC 163

Query: 132 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCRS 22
           + G + NA  L   LQ+ G      T+  L++G+C++
Sbjct: 164 KNGYVGNALSLFRNLQRHGFVPQVLTYNALINGLCKA 200


>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449468117|ref|XP_004151768.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
           gi|449532400|ref|XP_004173169.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  169 bits (428), Expect = 4e-40
 Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 31/194 (15%)
 Frame = -1

Query: 492 ITFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLC-------------- 355
           +TFN +I+GLC+ GYT  A  LFR LQ HGF   + TYN+LIN LC              
Sbjct: 148 VTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNE 207

Query: 354 -----------T*CVYLYYC------DQGFEIFMEMKSKGYNFDSFGYCTVISVLAKLGL 226
                      T    +  C      ++GFEIF +MK+KGY FD F YCTV     KLG 
Sbjct: 208 AMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGR 267

Query: 225 TREANYCIGEMVRNGIGLDLVAYNTLFNVYCREGKLENAFGLANELQKCGMESDQYTHTI 46
             EA +C+ +M++N +G+D+  YNT  N+YC+EGKLE A+ L +E++  G+E D YTH+I
Sbjct: 268 FEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSI 327

Query: 45  LVDGMCRSGDMDGA 4
           + +G+CR G+++GA
Sbjct: 328 ITNGLCRVGNIEGA 341



 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 45/156 (28%), Positives = 73/156 (46%)
 Frame = -1

Query: 492 ITFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLCT*CVYLYYCDQGFE 313
           +T+N LI G CR      A+S+  +++E G    + TYN LI          +  +Q  +
Sbjct: 43  VTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNSLI----AGATRNFSLEQSLD 98

Query: 312 IFMEMKSKGYNFDSFGYCTVISVLAKLGLTREANYCIGEMVRNGIGLDLVAYNTLFNVYC 133
           +F EM   G   D + Y T++     LG   EA     +++   +    V +NT+ N  C
Sbjct: 99  LFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLC 158

Query: 132 REGKLENAFGLANELQKCGMESDQYTHTILVDGMCR 25
           + G   NA  L   LQ+ G      T+ IL++G+C+
Sbjct: 159 KHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCK 194



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
 Frame = -1

Query: 492 ITFNILIHGLCRSGYTGVAFSLFRKLQEHGFEGTIATYNVLINWLCT*CVYLY-YCDQGF 316
           IT+N LI G  R+     +  LF ++ + G    I +YN L++     C ++    D+ +
Sbjct: 78  ITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMH-----CFFILGKPDEAY 132

Query: 315 EIFMEMKSKGYNFDSFGYCTVISVLAKLGLTREANYCIGEMVRNGIGLDLVAYNTLFNVY 136
            +F ++  K  +     + T+I+ L K G T  A      + R+G    LV YN L N  
Sbjct: 133 RVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGL 192

Query: 135 CREGKLENAFGLANELQKCGMESDQYTHTILVDGMCRS 22
           C+  +L  A  + NE    G+E +  T+T L+    RS
Sbjct: 193 CKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRS 230