BLASTX nr result

ID: Coptis24_contig00020170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020170
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   159   2e-37
emb|CBI27422.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   156   1e-36
ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-lik...   156   1e-36
ref|XP_002887212.1| 2-oxoglutarate decarboxylase/ hydro-lyase/ m...   150   8e-35

>ref|XP_003545988.1| PREDICTED: protein PHYLLO, chloroplastic-like [Glycine max]
          Length = 1614

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/109 (71%), Positives = 91/109 (83%)
 Frame = +3

Query: 3   TSSRFCFRLSSTTAVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLGLTYFCIAP 182
           +SS+FC RLS+T   + N+LD  +E+   L+ SANIN VWASLI+EEC+RLGL YFCIAP
Sbjct: 282 SSSQFCVRLSATIVFSNNMLDHANELSNSLKESANINTVWASLIVEECTRLGLMYFCIAP 341

Query: 183 GSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITSS 329
           GSRSSPLAVAA+SH   TCISC+DERSLAFHAVGY RGS+ PAVVITSS
Sbjct: 342 GSRSSPLAVAAASHKLITCISCYDERSLAFHAVGYGRGSHIPAVVITSS 390


>emb|CBI27422.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/108 (71%), Positives = 87/108 (80%)
 Frame = +3

Query: 6   SSRFCFRLSSTTAVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLGLTYFCIAPG 185
           S +FC RLS T     N+LD   E     Q  ANINA+WASLIIEEC+R GL YFC+APG
Sbjct: 33  SCQFCIRLSPTVTAASNMLDHSGERTFSSQDYANINALWASLIIEECTRFGLMYFCVAPG 92

Query: 186 SRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITSS 329
           SRSSPLA+AAS+HP TTCI+CFDERSLAFHA+GYARGS+KPAVVITSS
Sbjct: 93  SRSSPLAIAASTHPLTTCIACFDERSLAFHALGYARGSHKPAVVITSS 140


>ref|XP_004155371.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/106 (71%), Positives = 88/106 (83%)
 Frame = +3

Query: 12  RFCFRLSSTTAVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLGLTYFCIAPGSR 191
           +FC RLS + AV  N+LD  +E     Q  ANINA+WASLI+EECSRLGLTYFCIAPGSR
Sbjct: 391 QFCIRLSPSVAVACNMLDHINETGHSEQEHANINALWASLIVEECSRLGLTYFCIAPGSR 450

Query: 192 SSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITSS 329
           SSPLA+AA+SHP  TC +CFDERSLAFHA+GYA+GS+ PAVVITSS
Sbjct: 451 SSPLAIAAASHPLITCTACFDERSLAFHAIGYAKGSHSPAVVITSS 496


>ref|XP_004135420.1| PREDICTED: protein PHYLLO, chloroplastic-like [Cucumis sativus]
          Length = 1794

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/106 (71%), Positives = 88/106 (83%)
 Frame = +3

Query: 12  RFCFRLSSTTAVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLGLTYFCIAPGSR 191
           +FC RLS + AV  N+LD  +E     Q  ANINA+WASLI+EECSRLGLTYFCIAPGSR
Sbjct: 391 QFCIRLSPSVAVACNMLDHINETGHSEQEHANINALWASLIVEECSRLGLTYFCIAPGSR 450

Query: 192 SSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITSS 329
           SSPLA+AA+SHP  TC +CFDERSLAFHA+GYA+GS+ PAVVITSS
Sbjct: 451 SSPLAIAAASHPLITCTACFDERSLAFHAIGYAKGSHSPAVVITSS 496


>ref|XP_002887212.1| 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333053|gb|EFH63471.1| 2-oxoglutarate
           decarboxylase/ hydro-lyase/ magnesium ion binding
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1716

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/109 (65%), Positives = 90/109 (82%)
 Frame = +3

Query: 3   TSSRFCFRLSSTTAVTRNVLDRPSEIRCLLQYSANINAVWASLIIEECSRLGLTYFCIAP 182
           +S +F  +LS     + N+L+R +E+   L+  ANINAVWAS IIEEC+RLGLTYFC+AP
Sbjct: 329 SSCQFHCKLSPDVVFSNNMLNRETEVSNFLKDEANINAVWASAIIEECTRLGLTYFCVAP 388

Query: 183 GSRSSPLAVAASSHPRTTCISCFDERSLAFHAVGYARGSYKPAVVITSS 329
           GSRSS LA+AA++HP TTC++CFDERSLAFHA+GYA+GS KPAV+ITSS
Sbjct: 389 GSRSSHLAIAAANHPLTTCLACFDERSLAFHAIGYAKGSLKPAVIITSS 437


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