BLASTX nr result

ID: Coptis24_contig00020162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020162
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436376.1| hypothetical protein SORBIDRAFT_10g001390 [S...    75   5e-12
ref|NP_001150208.1| DAG protein [Zea mays] gi|195637572|gb|ACG38...    75   7e-12
ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis...    74   9e-12
ref|XP_002862198.1| hypothetical protein ARALYDRAFT_921093 [Arab...    74   2e-11

>ref|XP_002436376.1| hypothetical protein SORBIDRAFT_10g001390 [Sorghum bicolor]
           gi|241914599|gb|EER87743.1| hypothetical protein
           SORBIDRAFT_10g001390 [Sorghum bicolor]
          Length = 222

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 41/88 (46%), Positives = 54/88 (61%)
 Frame = +3

Query: 126 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 305
           C  +HWL+ +  P    +N  + I   ++ LA+V+GSE+EAK KIY V C   FGFG EI
Sbjct: 85  CDYEHWLIVMDKPGGEGANKQQMIDCYIQTLAKVLGSEEEAKRKIYNVSCERYFGFGCEI 144

Query: 306 DMGTVNKLKVLQDVLALLPDYSVSCKYK 389
           D  T NKL+ L  VL +LPD  V  +YK
Sbjct: 145 DEETSNKLEGLPGVLFVLPDSYVDPEYK 172


>ref|NP_001150208.1| DAG protein [Zea mays] gi|195637572|gb|ACG38254.1| DAG protein [Zea
           mays] gi|223947219|gb|ACN27693.1| unknown [Zea mays]
           gi|413953464|gb|AFW86113.1| DAG protein [Zea mays]
          Length = 223

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/88 (45%), Positives = 55/88 (62%)
 Frame = +3

Query: 126 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 305
           C  +HWL+ +  P    ++  + I   ++ LA+V+GSE+EAK+KIY V C   FGFG EI
Sbjct: 86  CDYEHWLIVMDKPGGEGASKQQMIDCYIQTLAKVLGSEEEAKKKIYNVSCERYFGFGCEI 145

Query: 306 DMGTVNKLKVLQDVLALLPDYSVSCKYK 389
           D  T NKL+ L  VL +LPD  V  +YK
Sbjct: 146 DEETSNKLEGLPGVLFVLPDSYVDAEYK 173


>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 12/134 (8%)
 Frame = +3

Query: 24  SVQPVARFTAFNL-----DSIIYNDLYSYHFFRFEPNIE-------CKSDHWLVHLKDPE 167
           +  P ARFT+         +  Y+ L S   F   P  E       C  +HWL+ +  P 
Sbjct: 58  TTSPAARFTSIRCRVNRAGNSGYSPLNSGSNFSDRPPNEMAPLFPGCDYEHWLIVMDKPG 117

Query: 168 CLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEIDMGTVNKLKVLQDV 347
              +   + I   +  LA+VVGSE+EAK KIY V C   FGFG EID  T NKL+ L  V
Sbjct: 118 GEGATKQQMIDCYIETLAKVVGSEEEAKTKIYNVSCERYFGFGCEIDEETSNKLEGLPGV 177

Query: 348 LALLPDYSVSCKYK 389
           L +LPD  V  +YK
Sbjct: 178 LFVLPDSYVDPEYK 191


>ref|XP_002285392.1| PREDICTED: DAG protein, chloroplastic [Vitis vinifera]
           gi|147779193|emb|CAN67991.1| hypothetical protein
           VITISV_023920 [Vitis vinifera]
          Length = 233

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/88 (46%), Positives = 54/88 (61%)
 Frame = +3

Query: 126 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 305
           C  +HWL+ +  P    +   + I   ++ LA+VVGSE+EAK+KIY V C   FGFG EI
Sbjct: 96  CDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEEEAKKKIYNVSCERYFGFGCEI 155

Query: 306 DMGTVNKLKVLQDVLALLPDYSVSCKYK 389
           D  T NKL+ L  VL +LPD  V  +YK
Sbjct: 156 DEETSNKLEGLPGVLFVLPDSYVDPEYK 183


>ref|XP_002862198.1| hypothetical protein ARALYDRAFT_921093 [Arabidopsis lyrata subsp.
           lyrata] gi|297827001|ref|XP_002881383.1| hypothetical
           protein ARALYDRAFT_902623 [Arabidopsis lyrata subsp.
           lyrata] gi|297307447|gb|EFH38456.1| hypothetical protein
           ARALYDRAFT_921093 [Arabidopsis lyrata subsp. lyrata]
           gi|297327222|gb|EFH57642.1| hypothetical protein
           ARALYDRAFT_902623 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/88 (45%), Positives = 55/88 (62%)
 Frame = +3

Query: 126 CKSDHWLVHLKDPECLFSNYTKCIRYCVRLLAEVVGSEDEAKEKIYVVWCAEPFGFGAEI 305
           C  +HWL+ ++ P    +   + I   V+ LA++VGSE+EAK+KIY V C   FGFG EI
Sbjct: 94  CDYEHWLIVMEKPGGENAQKQQMIDCYVQTLAKIVGSEEEAKKKIYNVSCERYFGFGCEI 153

Query: 306 DMGTVNKLKVLQDVLALLPDYSVSCKYK 389
           D  T NKL+ L  VL +LPD  V  ++K
Sbjct: 154 DEETSNKLEGLPGVLFVLPDSYVDPEFK 181


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