BLASTX nr result

ID: Coptis24_contig00020161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020161
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518929.1| PREDICTED: uncharacterized protein LOC100798...   113   3e-23
ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|2...   111   8e-23
ref|XP_002515331.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
ref|XP_003535999.1| PREDICTED: uncharacterized protein LOC100806...   108   7e-22
ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21

>ref|XP_003518929.1| PREDICTED: uncharacterized protein LOC100798623 [Glycine max]
          Length = 152

 Score =  113 bits (282), Expect = 3e-23
 Identities = 61/143 (42%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
 Frame = +1

Query: 16  MEGVYTNIYKGIKRYWNRKNYQRLNGSGSRRQNRVELAGLGTNXXXXXFWRIKITPKLRI 195
           MEG+  ++ +G+K YW RK Y+RLNGSG RR+NRVEL    T       WRI++ PK+RI
Sbjct: 1   MEGITASVCRGVKEYWRRKGYKRLNGSGRRRRNRVELGSTRTGKGRFWRWRIRLAPKIRI 60

Query: 196 LSFSSAKKVLIRLRDSYVNMMIGVAN----XXXXXXXXXXXXXXXXXXXXXXIRRDPLKE 363
               S KK+++ +RD+YV MM+G+AN                            R P KE
Sbjct: 61  RKIPSPKKMVLWVRDAYVRMMLGLANSRIMTVSASASGFGGTLAGADTSFAGFGRAPPKE 120

Query: 364 YDEKVIVEIYKSLMKQ--GQLVP 426
           YDEK I++IYKSL+    G LVP
Sbjct: 121 YDEKTIIQIYKSLLMAHGGPLVP 143


>ref|XP_002320323.1| predicted protein [Populus trichocarpa] gi|222861096|gb|EEE98638.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  111 bits (278), Expect = 8e-23
 Identities = 66/141 (46%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
 Frame = +1

Query: 16  MEGVYTNIYKGIKRYWNRKNYQRLNGSGS-RRQNRVEL-AGLGTNXXXXXFWRIKITPKL 189
           MEG+  ++Y  +K YW+R+ Y+R+NGSG  RR+  VEL +G  T+       RIKI PKL
Sbjct: 1   MEGISASMYTKMKGYWSRRGYERINGSGRIRRKRPVELGSGSSTSRGRGFSLRIKIKPKL 60

Query: 190 RILSFSSAKKVLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRDPLKEYD 369
           +IL  SS +K  + LRD+YV MM+G+AN                        R P+KEYD
Sbjct: 61  KILKMSSPRKFFVWLRDAYVKMMLGLANSRAIGTSGYGDAFG---------ARRPIKEYD 111

Query: 370 EKVIVEIYKSL-MKQGQLVPH 429
           EK+IV+IYKSL M QGQLVPH
Sbjct: 112 EKMIVQIYKSLVMTQGQLVPH 132


>ref|XP_002515331.1| conserved hypothetical protein [Ricinus communis]
           gi|223545811|gb|EEF47315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score =  110 bits (276), Expect = 1e-22
 Identities = 67/145 (46%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
 Frame = +1

Query: 16  MEGVYTNIYKGIKRYWNRKNYQRLNGSGSRRQ-NRVELAGLGT-----NXXXXXFWRIKI 177
           MEGV  ++Y  I+ YW R+ YQRLN SG RR+ N VEL G        +      WRIKI
Sbjct: 1   MEGVSASMYTKIRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKI 60

Query: 178 TPKLRILSFSSAKKVLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRDPL 357
            PKL+I   +S KK  + LRD+YVNMM+G AN                        + PL
Sbjct: 61  KPKLKIFKRASPKKFFVWLRDAYVNMMLGFAN-----SRVIGPGYGGGGGIATNFGKGPL 115

Query: 358 KEYDEKVIVEIYKSLMK-QGQLVPH 429
           KEYDEK+I++IYKSL+  QGQLVPH
Sbjct: 116 KEYDEKMIIQIYKSLVAGQGQLVPH 140


>ref|XP_003535999.1| PREDICTED: uncharacterized protein LOC100806979 [Glycine max]
          Length = 153

 Score =  108 bits (270), Expect = 7e-22
 Identities = 60/143 (41%), Positives = 79/143 (55%), Gaps = 7/143 (4%)
 Frame = +1

Query: 16  MEGVYTNIYKGIKRYWNRKNYQRLNGSGSRRQNRVELAGLGTNXXXXXFWRIKITPKLRI 195
           MEG+  ++ +G+K YW RK Y++LNGSG RR+NRVEL    T       WRI++ PK+RI
Sbjct: 1   MEGITASVCRGVKDYWRRKGYKKLNGSGRRRRNRVELGSTRTGKGRFWRWRIRLAPKIRI 60

Query: 196 LSFSSAKKVLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRD------PL 357
               S KK+L+ +RD+YV MM+G+AN                                P 
Sbjct: 61  RKIPSPKKMLLWVRDAYVRMMLGLANSRVMTVNAASASGFGGALSGVGTSLGTGFGLAPP 120

Query: 358 KEYDEKVIVEIYKS-LMKQGQLV 423
           KEYDEK I++IYKS LM  G LV
Sbjct: 121 KEYDEKTIIQIYKSLLMAHGPLV 143


>ref|XP_002302741.1| predicted protein [Populus trichocarpa] gi|222844467|gb|EEE82014.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score =  106 bits (264), Expect = 3e-21
 Identities = 63/141 (44%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
 Frame = +1

Query: 16  MEGVYTNIYKGIKRYWNRKNYQRLNGSG-SRRQNRVELAGLGTNXXXXX--FWRIKITPK 186
           MEGV   I+  +K YW+R+ Y+R+NGSG +RR   VE+  + T         WRIK+ PK
Sbjct: 1   MEGVSARIFTKMKEYWSRRGYERINGSGRTRRSWPVEVGSVSTTSRRRRRFAWRIKVKPK 60

Query: 187 LRILSFSSAKKVLIRLRDSYVNMMIGVANXXXXXXXXXXXXXXXXXXXXXXIRRDPLKEY 366
           L+ L  SS K+  + LRD+YV MM+G AN                      I   P+KEY
Sbjct: 61  LKALKMSSPKRFFVWLRDAYVKMMLGFAN----------SRARGTAGYGDGIGARPIKEY 110

Query: 367 DEKVIVEIYKSL-MKQGQLVP 426
           DEK+I+EIYKSL M QGQLVP
Sbjct: 111 DEKMIIEIYKSLVMAQGQLVP 131


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