BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020160
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   148   5e-34
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...   146   1e-33
ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu...   146   2e-33
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             142   3e-32
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]   140   1e-31

>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
           gi|222864159|gb|EEF01290.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1408

 Score =  148 bits (373), Expect = 5e-34
 Identities = 67/110 (60%), Positives = 87/110 (79%)
 Frame = +3

Query: 3   SEMHDEEFYLVETTGALVSLSSSVATIYYYCSQLPSDGYFNPTPRFIFDEESKVCTLHLP 182
           SE++++EFY VE TGA+V+LSSSV+ IY+YCS+LPSDGYF P P  I D+E + CTLHLP
Sbjct: 538 SELYEDEFYSVEGTGAVVTLSSSVSLIYFYCSRLPSDGYFKPAPICIIDKEKETCTLHLP 597

Query: 183 KSCPLETVCVQGPKDILKKLVCLEACKKLHEIGALNDNLIPESVEDDTYA 332
           KS P++ +CVQG    LK+  CLEACK+LH IGAL DNL+P+ VE++  A
Sbjct: 598 KSSPIQNICVQGNNKNLKQKACLEACKQLHLIGALTDNLVPDVVEEEAVA 647


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
           gi|222852017|gb|EEE89564.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1468

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/106 (64%), Positives = 83/106 (78%)
 Frame = +3

Query: 15  DEEFYLVETTGALVSLSSSVATIYYYCSQLPSDGYFNPTPRFIFDEESKVCTLHLPKSCP 194
           D+EFY VE TGA+VSLSSSV+ IY+YCS+LPSDGYF P PR I D+E+  CTLHLPKS P
Sbjct: 592 DDEFYRVEGTGAVVSLSSSVSLIYFYCSRLPSDGYFKPAPRCIIDKETMTCTLHLPKSSP 651

Query: 195 LETVCVQGPKDILKKLVCLEACKKLHEIGALNDNLIPESVEDDTYA 332
           ++T+CVQG    LK+  CLEACKKLH  GAL DNL+P+ V ++  A
Sbjct: 652 VQTICVQGNIKTLKQKACLEACKKLHVSGALTDNLVPDIVMEEAVA 697


>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
           gi|223545861|gb|EEF47364.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1388

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/110 (60%), Positives = 88/110 (80%)
 Frame = +3

Query: 3   SEMHDEEFYLVETTGALVSLSSSVATIYYYCSQLPSDGYFNPTPRFIFDEESKVCTLHLP 182
           SE H+ E+Y VE+T ALV+L+SSV+ IY+YCS+LPSDGYF PTPR + D+E + CTL LP
Sbjct: 526 SEFHEGEYYFVESTNALVTLTSSVSLIYFYCSRLPSDGYFKPTPRCLIDKEMERCTLLLP 585

Query: 183 KSCPLETVCVQGPKDILKKLVCLEACKKLHEIGALNDNLIPESVEDDTYA 332
           KSC + T+ V+G   I+K+  CLEACK+LH+IGALNDNL+P+ V ++T A
Sbjct: 586 KSCSIHTISVEGNVKIIKQKACLEACKQLHKIGALNDNLVPDIVVEETVA 635


>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/107 (58%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
 Frame = +3

Query: 6   EMHDEEFYLVETTGALVSLSSSVATIYYYCSQLPSDGYFNPTPRFIFDEESKVCTLHLPK 185
           E+HDE +Y VETTGA+V+LSSSV+ +Y+YCS+LPSDGY+ P+PR   ++E++ CTL+LPK
Sbjct: 538 ELHDEPYYKVETTGAVVTLSSSVSLLYFYCSRLPSDGYYKPSPRCAIEKETETCTLYLPK 597

Query: 186 SCPLE-TVCVQGPKDILKKLVCLEACKKLHEIGALNDNLIPESVEDD 323
           +CPL+  + V+G   ILK+L CLEACK+LH  GAL DNL+P+ VE++
Sbjct: 598 NCPLQKVISVKGNTKILKQLACLEACKELHREGALTDNLVPDIVEEE 644


>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score =  140 bits (353), Expect = 1e-31
 Identities = 61/107 (57%), Positives = 85/107 (79%)
 Frame = +3

Query: 3   SEMHDEEFYLVETTGALVSLSSSVATIYYYCSQLPSDGYFNPTPRFIFDEESKVCTLHLP 182
           S + DEEFY VE+T A+V+LSSS+  +Y+YCS+LPSDGYF PTPR   +++   CT++LP
Sbjct: 441 SSLDDEEFYWVESTRAIVTLSSSIGLLYFYCSRLPSDGYFKPTPRCSINQDMGTCTIYLP 500

Query: 183 KSCPLETVCVQGPKDILKKLVCLEACKKLHEIGALNDNLIPESVEDD 323
           KSCP++TV V+G    LK++ CLEACK+LH+ GAL DNL+P+ VE++
Sbjct: 501 KSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEE 547