BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020159
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588424.1| hypothetical protein ZeamMp180 [Zea mays subsp....    85   7e-17
dbj|BAG84633.1| hypothetical protein [Aegilops crassa]                 82   1e-16
ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|...    46   4e-06

>ref|YP_588424.1| hypothetical protein ZeamMp180 [Zea mays subsp. mays]
           gi|40795108|gb|AAR91152.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|413954228|gb|AFW86877.1|
           putative uncharacterized protein orf110-c [Zea mays]
           gi|413954267|gb|AFW86916.1| putative uncharacterized
           protein orf110-c [Zea mays]
          Length = 110

 Score = 85.1 bits (209), Expect(2) = 7e-17
 Identities = 42/52 (80%), Positives = 44/52 (84%)
 Frame = +1

Query: 106 GGCNTPVRITGDSSKNGGEVNSTRRRSGMDVDPSGRDNHSGLGRGGDDTSLS 261
           GG +TP RITGD  KNGGEV STRR SGM+VDPSGRDNHSG GRGG DTSLS
Sbjct: 60  GGADTPARITGDGYKNGGEVKSTRRHSGMNVDPSGRDNHSGPGRGG-DTSLS 110



 Score = 26.9 bits (58), Expect(2) = 7e-17
 Identities = 15/17 (88%), Positives = 15/17 (88%), Gaps = 1/17 (5%)
 Frame = +2

Query: 68  GLLR-KILSFSSTQGGA 115
           GLLR KILSFSST GGA
Sbjct: 46  GLLREKILSFSSTPGGA 62


>dbj|BAG84633.1| hypothetical protein [Aegilops crassa]
          Length = 113

 Score = 82.4 bits (202), Expect(2) = 1e-16
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = +1

Query: 106 GGCNTPVRITGDSSKNGGEVNSTRRRSGMDVDPSGRDNHSGLGRGGDDTSLS 261
           GG +TP RITGD  KNGGEV STRR SGM+VDPSG DNHSG GRGG DTSLS
Sbjct: 63  GGADTPARITGDGYKNGGEVKSTRRHSGMNVDPSGGDNHSGPGRGG-DTSLS 113



 Score = 28.9 bits (63), Expect(2) = 1e-16
 Identities = 16/18 (88%), Positives = 16/18 (88%), Gaps = 1/18 (5%)
 Frame = +2

Query: 65  GGLLR-KILSFSSTQGGA 115
           GGLLR KILSFSST GGA
Sbjct: 48  GGLLREKILSFSSTLGGA 65


>ref|XP_003588351.1| Maturase [Medicago truncatula] gi|355477399|gb|AES58602.1| Maturase
           [Medicago truncatula]
          Length = 996

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +2

Query: 104 QGGATHLCGLQVTVPRMAGR*TVPDDVQEWM 196
           +G  THL GLQVTV RMAG+ TVPDD+Q W+
Sbjct: 150 RGVRTHLRGLQVTVTRMAGKLTVPDDIQGWI 180



 Score = 29.3 bits (64), Expect(2) = 4e-06
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +3

Query: 75  SEKSFLSRPLRGVQ 116
           SEKSFLSRPLRGV+
Sbjct: 140 SEKSFLSRPLRGVR 153