BLASTX nr result

ID: Coptis24_contig00020156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020156
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634193.1| PREDICTED: uncharacterized protein LOC100852...   112   8e-23
ref|XP_002322782.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
emb|CBI15497.3| unnamed protein product [Vitis vinifera]              109   5e-22
ref|XP_002266294.2| PREDICTED: uncharacterized protein LOC100247...   108   1e-21
ref|NP_001235032.1| uncharacterized protein LOC100306693 [Glycin...   101   2e-19

>ref|XP_003634193.1| PREDICTED: uncharacterized protein LOC100852715 [Vitis vinifera]
          Length = 136

 Score =  112 bits (280), Expect = 8e-23
 Identities = 66/136 (48%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
 Frame = +3

Query: 78  MSKEKPPASKP-KLVTLDKAFKLAESWVNNMSGTAADDLSELQFEGRQPRLGLGAIPVRQ 254
           MS   PP + P +LV L+KAFKLAE WV NMS    D+ ++++ E R  RLGLGA   RQ
Sbjct: 1   MSMSTPPKTCPSQLVVLNKAFKLAEQWVKNMSTPLVDEPTDVKLEARPSRLGLGAKVSRQ 60

Query: 255 SKPVYSMDPVERRLRAKLETGKRRTAKSIEES----HTPAEXXXXXXXXPESRTNAFTKK 422
           SK   S DP+ER+L AKL+ GKR++AKSI+ES     + ++         ESRT +F+KK
Sbjct: 61  SKIGPSNDPIERKLHAKLDAGKRKSAKSIKESTLSARSGSDNSDDSDEDLESRTKSFSKK 120

Query: 423 RVIPVIPSLHTSKKRK 470
           RV+P   SL  +KK K
Sbjct: 121 RVVPPTSSLQRNKKPK 136


>ref|XP_002322782.1| predicted protein [Populus trichocarpa] gi|222867412|gb|EEF04543.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  110 bits (275), Expect = 3e-22
 Identities = 69/134 (51%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
 Frame = +3

Query: 81  SKEKPPASKPKLVTLDKAFKLAESWVNNMSGTAADDLSELQFEGRQPRLGLGAIPV-RQS 257
           +++K PA   ++V LD AFK+A  WVNNMS    D+ +E++ EGR  RLGLGA  V R S
Sbjct: 6   AQKKTPA---QIVRLDNAFKMAGQWVNNMSKAVEDEPAEVESEGRPSRLGLGAKEVPRHS 62

Query: 258 KPVYSMDPVERRLRAKLETGKRRTAKSIEESHTPAEXXXXXXXXP---ESRTNAFTKKRV 428
           K   S DPVERRL AKLE GKRR AK IEES  PA             ESRT+ F KKR 
Sbjct: 63  KARLSNDPVERRLYAKLEAGKRRAAKIIEESIVPARDCNEDDDSDGELESRTSTFAKKRP 122

Query: 429 IPVIPSLHTSKKRK 470
            P + SL   KK+K
Sbjct: 123 GPQVQSLQVKKKQK 136


>emb|CBI15497.3| unnamed protein product [Vitis vinifera]
          Length = 134

 Score =  109 bits (273), Expect = 5e-22
 Identities = 64/131 (48%), Positives = 85/131 (64%), Gaps = 5/131 (3%)
 Frame = +3

Query: 93  PPASKP-KLVTLDKAFKLAESWVNNMSGTAADDLSELQFEGRQPRLGLGAIPVRQSKPVY 269
           PP + P +LV L+KAFKLAE WV NMS    D+ ++++ E R  RLGLGA   RQSK   
Sbjct: 4   PPKTCPSQLVVLNKAFKLAEQWVKNMSTPLVDEPTDVKLEARPSRLGLGAKVSRQSKIGP 63

Query: 270 SMDPVERRLRAKLETGKRRTAKSIEES----HTPAEXXXXXXXXPESRTNAFTKKRVIPV 437
           S DP+ER+L AKL+ GKR++AKSI+ES     + ++         ESRT +F+KKRV+P 
Sbjct: 64  SNDPIERKLHAKLDAGKRKSAKSIKESTLSARSGSDNSDDSDEDLESRTKSFSKKRVVPP 123

Query: 438 IPSLHTSKKRK 470
             SL  +KK K
Sbjct: 124 TSSLQRNKKPK 134


>ref|XP_002266294.2| PREDICTED: uncharacterized protein LOC100247267 [Vitis vinifera]
          Length = 136

 Score =  108 bits (270), Expect = 1e-21
 Identities = 66/136 (48%), Positives = 85/136 (62%), Gaps = 5/136 (3%)
 Frame = +3

Query: 78  MSKEKPPASKP-KLVTLDKAFKLAESWVNNMSGTAADDLSELQFEGRQPRLGLGAIPVRQ 254
           MS   PP + P +LV L+KAFKLAE WV NMS    D+ +E++ E R  RLGLGA   RQ
Sbjct: 1   MSTATPPKTCPSQLVVLNKAFKLAEQWVKNMSTPLEDEPTEVKLEARPSRLGLGAKVSRQ 60

Query: 255 SKPVYSMDPVERRLRAKLETGKRRTAKSIEESHTPA----EXXXXXXXXPESRTNAFTKK 422
           SK   S DP+ER+L AKL+ GKR+++KS +ES   A    +         ESRT +F+KK
Sbjct: 61  SKIGPSNDPIERKLYAKLDAGKRKSSKSSKESTLSARNGSDNSDDSDEDLESRTKSFSKK 120

Query: 423 RVIPVIPSLHTSKKRK 470
           RV+P   SL  +KK K
Sbjct: 121 RVVPPTSSLQRNKKPK 136


>ref|NP_001235032.1| uncharacterized protein LOC100306693 [Glycine max]
           gi|255629295|gb|ACU14992.1| unknown [Glycine max]
          Length = 137

 Score =  101 bits (251), Expect = 2e-19
 Identities = 65/125 (52%), Positives = 75/125 (60%), Gaps = 4/125 (3%)
 Frame = +3

Query: 108 PKLVTLDKAFKLAESWVNNMSGTAADDLSELQFEGRQPRLGLGAIPVRQSKPVYSMDPVE 287
           P++V LDKA KLAE WVNNMS  A DD +    EGR  RLGLGA   RQSK V S DPVE
Sbjct: 13  PQIVKLDKALKLAELWVNNMSKDADDDRTNADVEGRPSRLGLGAKVSRQSKFVPSDDPVE 72

Query: 288 RRLRAKLETGKRRTAKSIEESHTPAEXXXXXXXXPE---SRTNAFTK-KRVIPVIPSLHT 455
           R+L AKL   KR+ A   +ES T A          E   SR NAFTK K   P+I S+  
Sbjct: 73  RKLYAKLNAEKRKAANIAKESATIARDALDDDEDNEDLDSRANAFTKRKATAPLISSMLR 132

Query: 456 SKKRK 470
           +KK+K
Sbjct: 133 NKKQK 137


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