BLASTX nr result

ID: Coptis24_contig00020136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020136
         (1451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   506   e-141
ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...   487   e-135
ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...   479   e-133
ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, par...   476   e-132
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   474   e-131

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  506 bits (1304), Expect = e-141
 Identities = 267/377 (70%), Positives = 299/377 (79%), Gaps = 1/377 (0%)
 Frame = +2

Query: 2    DSRSQFKEYAAAGTLNQNYANILLMLLRLRQACDHPLLVKGHDCDSVGKASIEMARRLPR 181
            DSRSQFKEYAAAGT+NQNYANILLMLLRLRQACDHPLLVKG++ DS+ K S EMA++LP 
Sbjct: 656  DSRSQFKEYAAAGTVNQNYANILLMLLRLRQACDHPLLVKGYNTDSIRKVSSEMAKKLPS 715

Query: 182  DMLINLLNRFEXXXXXXXXXXXXQ-AVVTMCGHVFCYQCVSDHLTGDDNMCPAHECKEQL 358
            D+LINLL+  E            + AVVTMCGHVFCYQCVS++LTGDDN CPA ECKEQL
Sbjct: 716  DILINLLDILETSAICRVCNDPPEDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQL 775

Query: 359  GTDVVFAKATLRNCISGEWHDDITCLSEVVDNSLALQNMYTSSKIRAALEILERYCKPKN 538
            G DVVF+KATL +CIS E    ++  S+  + S+ LQN Y+SSKIRAALEIL+ +CK  +
Sbjct: 776  GADVVFSKATLISCISDELDGSLSNSSQSAEKSINLQNEYSSSKIRAALEILQSHCKLTS 835

Query: 539  LSNGRYGSEGHRGNSCSSETKYLECSSSDVCGAIVTAQPEKPDKAIVFSQWTGMLDLVET 718
              +  + S G  G+  + ET                   E P KAIVFSQWT MLDLVE 
Sbjct: 836  PDSDPHSSMGCNGSYSNPET-------------------EGPIKAIVFSQWTSMLDLVEM 876

Query: 719  SLNHSSIQYRRFDGTMSLASRDKAVKDFNNDPEVTVMLMSLKAGNLGLNMVAACRVILLD 898
            S+NHS IQYRR DGTMSLASRD+AVKDFN DPEVTVMLMSLKAGNLGLNMVAA  VILLD
Sbjct: 877  SMNHSCIQYRRLDGTMSLASRDRAVKDFNTDPEVTVMLMSLKAGNLGLNMVAASLVILLD 936

Query: 899  LWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILSLQEEKRKMVASAFGEDQTG 1078
            LWWNPTTEDQAVDRAHRIGQTRPVTVSR+TIKDTVEDRIL+LQE+KRKMVASAFGEDQTG
Sbjct: 937  LWWNPTTEDQAVDRAHRIGQTRPVTVSRITIKDTVEDRILALQEDKRKMVASAFGEDQTG 996

Query: 1079 GSATRLTVEDLRYLFMV 1129
            GSATRLTVEDL+YLFMV
Sbjct: 997  GSATRLTVEDLKYLFMV 1013


>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Cucumis sativus]
          Length = 1015

 Score =  487 bits (1254), Expect = e-135
 Identities = 257/381 (67%), Positives = 293/381 (76%), Gaps = 5/381 (1%)
 Frame = +2

Query: 2    DSRSQFKEYAAAGTLNQNYANILLMLLRLRQACDHPLLVKGHDCDSVGKASIEMARRLPR 181
            DSR QFK YAAAGT+ QNYANILLMLLRLRQACDHPLLVKG++ DSVGK SIEMA +LP+
Sbjct: 636  DSRKQFKAYAAAGTVKQNYANILLMLLRLRQACDHPLLVKGYNTDSVGKDSIEMASKLPK 695

Query: 182  DMLINLLNRFEXXXXXXXXXXXX--QAVVTMCGHVFCYQCVSDHLTGDDNMCPAHECKEQ 355
            DML+NL+   E                VVTMCGHVFC+QCVS+ +TGDDNMCPA  CKEQ
Sbjct: 696  DMLMNLIKCLEASLAICRVCEDPPENPVVTMCGHVFCFQCVSESMTGDDNMCPALGCKEQ 755

Query: 356  LGTDVVFAKATLRNCISGEWHDDITCLSEVVDNSLALQNMYTSSKIRAALEILERYCKPK 535
            +  DVVF+K TLR C S +     T L  + + S  + + Y+SSKIRA LEIL+  CK  
Sbjct: 756  VAADVVFSKTTLRKCFSEDLDGGSTSLG-IPEKSQVVHSEYSSSKIRAVLEILQNNCKAS 814

Query: 536  NLSNGRYGSEGHRGNSCSSETKYLECSSSDVCG---AIVTAQPEKPDKAIVFSQWTGMLD 706
              ++ +  S G  G+S  SE + +E   SDV     A      E+P K IVFSQWT MLD
Sbjct: 815  ISTSEQGVSVGCNGSSLQSEDECIEICDSDVNNTKHASPCPPTEEPVKTIVFSQWTSMLD 874

Query: 707  LVETSLNHSSIQYRRFDGTMSLASRDKAVKDFNNDPEVTVMLMSLKAGNLGLNMVAACRV 886
            LVE SLN + IQYRR DGTMSL SRD+AVKDFN+DPE++VMLMSLKAGNLGLNMVAAC V
Sbjct: 875  LVELSLNEACIQYRRLDGTMSLVSRDRAVKDFNSDPEISVMLMSLKAGNLGLNMVAACHV 934

Query: 887  ILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILSLQEEKRKMVASAFGE 1066
            ILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSR+T+KDTVEDRIL+LQEEKRKMVASAFGE
Sbjct: 935  ILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITVKDTVEDRILALQEEKRKMVASAFGE 994

Query: 1067 DQTGGSATRLTVEDLRYLFMV 1129
            DQ+GGSA+RLTVEDLRYLFMV
Sbjct: 995  DQSGGSASRLTVEDLRYLFMV 1015


>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Glycine max]
          Length = 975

 Score =  479 bits (1234), Expect = e-133
 Identities = 251/376 (66%), Positives = 287/376 (76%)
 Frame = +2

Query: 2    DSRSQFKEYAAAGTLNQNYANILLMLLRLRQACDHPLLVKGHDCDSVGKASIEMARRLPR 181
            DSR QFK YAAAGT++QNYANILLMLLRLRQACDHPLLVK  D D VGK S+EMA+ LPR
Sbjct: 612  DSRLQFKAYAAAGTVSQNYANILLMLLRLRQACDHPLLVKDFDSDPVGKDSVEMAKNLPR 671

Query: 182  DMLINLLNRFEXXXXXXXXXXXXQAVVTMCGHVFCYQCVSDHLTGDDNMCPAHECKEQLG 361
            DMLINL N  E            + V+TMCGHVFCYQCVS++LTGDDNMCP+  CKE +G
Sbjct: 672  DMLINLFNCLEATFAICLDPPE-EPVITMCGHVFCYQCVSEYLTGDDNMCPSVNCKELIG 730

Query: 362  TDVVFAKATLRNCISGEWHDDITCLSEVVDNSLALQNMYTSSKIRAALEILERYCKPKNL 541
             D+VF+KATLR+CIS +     +  S + D SL  Q  YTSSKI+A LE+L+  CK K  
Sbjct: 731  DDLVFSKATLRSCISDDGGSLSSANSHLCDYSLVQQRDYTSSKIKAVLEVLQSNCKLKIS 790

Query: 542  SNGRYGSEGHRGNSCSSETKYLECSSSDVCGAIVTAQPEKPDKAIVFSQWTGMLDLVETS 721
            S+    S G   +S SS+  Y   S++           E P KAIVFSQWT MLDLVETS
Sbjct: 791  SSDLLNSSGGCRDSPSSDNLYYSESTT-----------EGPIKAIVFSQWTSMLDLVETS 839

Query: 722  LNHSSIQYRRFDGTMSLASRDKAVKDFNNDPEVTVMLMSLKAGNLGLNMVAACRVILLDL 901
            L   SIQYRR DG M+L +RDKAVKDFN +PE+ VMLMSLKAGNLGLNMVAAC VILLDL
Sbjct: 840  LRQFSIQYRRLDGRMTLGARDKAVKDFNTEPEIAVMLMSLKAGNLGLNMVAACHVILLDL 899

Query: 902  WWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILSLQEEKRKMVASAFGEDQTGG 1081
            WWNPTTEDQA+DRAHRIGQTRPVTV+R+TIKDTVEDRIL+LQE+KRKMVASAFGED  GG
Sbjct: 900  WWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEDKRKMVASAFGEDHAGG 959

Query: 1082 SATRLTVEDLRYLFMV 1129
            + TRLTV+DL+YLFMV
Sbjct: 960  TGTRLTVDDLKYLFMV 975


>ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, partial [Cucumis sativus]
          Length = 379

 Score =  476 bits (1224), Expect = e-132
 Identities = 251/373 (67%), Positives = 287/373 (76%), Gaps = 5/373 (1%)
 Frame = +2

Query: 26   YAAAGTLNQNYANILLMLLRLRQACDHPLLVKGHDCDSVGKASIEMARRLPRDMLINLLN 205
            YAAAGT+ QNYANILLMLLRLRQACDHPLLVKG++ DSVGK SIEMA +LP+DML+NL+ 
Sbjct: 8    YAAAGTVKQNYANILLMLLRLRQACDHPLLVKGYNTDSVGKDSIEMASKLPKDMLMNLIK 67

Query: 206  RFEXXXXXXXXXXXX--QAVVTMCGHVFCYQCVSDHLTGDDNMCPAHECKEQLGTDVVFA 379
              E                VVTMCGHVFC+QCVS+ +TGDDNMCPA  CKEQ+  DVVF+
Sbjct: 68   CLEASLAICRVCEDPPENPVVTMCGHVFCFQCVSESMTGDDNMCPALGCKEQVAADVVFS 127

Query: 380  KATLRNCISGEWHDDITCLSEVVDNSLALQNMYTSSKIRAALEILERYCKPKNLSNGRYG 559
            K TLR C S +     T L  + + S  + + Y+SSKIRA LEIL+  CK    ++ +  
Sbjct: 128  KTTLRKCFSEDLDGGSTSLG-IPEKSQVVHSEYSSSKIRAVLEILQNNCKASISTSEQGV 186

Query: 560  SEGHRGNSCSSETKYLECSSSDVCG---AIVTAQPEKPDKAIVFSQWTGMLDLVETSLNH 730
            S G  G+S  SE + +E   SDV     A      E+P K IVFSQWT MLDLVE SLN 
Sbjct: 187  SVGCNGSSLQSEDECIEICDSDVNNTKHASPCPPTEEPVKTIVFSQWTSMLDLVELSLNE 246

Query: 731  SSIQYRRFDGTMSLASRDKAVKDFNNDPEVTVMLMSLKAGNLGLNMVAACRVILLDLWWN 910
            + IQYRR DGTMSL SRD+AVKDFN+DPE++VMLMSLKAGNLGLNMVAAC VILLDLWWN
Sbjct: 247  ACIQYRRLDGTMSLVSRDRAVKDFNSDPEISVMLMSLKAGNLGLNMVAACHVILLDLWWN 306

Query: 911  PTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILSLQEEKRKMVASAFGEDQTGGSAT 1090
            PTTEDQAVDRAHRIGQTRPVTVSR+T+KDTVEDRIL+LQEEKRKMVASAFGEDQ+GGSA+
Sbjct: 307  PTTEDQAVDRAHRIGQTRPVTVSRITVKDTVEDRILALQEEKRKMVASAFGEDQSGGSAS 366

Query: 1091 RLTVEDLRYLFMV 1129
            RLTVEDLRYLFMV
Sbjct: 367  RLTVEDLRYLFMV 379


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  474 bits (1221), Expect = e-131
 Identities = 251/383 (65%), Positives = 288/383 (75%), Gaps = 7/383 (1%)
 Frame = +2

Query: 2    DSRSQFKEYAAAGTLNQNYANILLMLLRLRQACDHPLLVKGHDCDSVGKASIEMARRLPR 181
            DSRSQFK YAAAGT++QNYANILLMLLRLRQACDHPLLVK  D D VGK S+EMA+ LPR
Sbjct: 645  DSRSQFKAYAAAGTVSQNYANILLMLLRLRQACDHPLLVKDFDSDPVGKDSVEMAKNLPR 704

Query: 182  DMLINLLNRFEXXXXXXXXXXXX--QAVVTMCGHVFCYQCVSDHLTGDDNMCPAHECKEQ 355
            +MLINL N  E              + V+TMCGHVFCYQCVS++LTGDDN CP+  CKE 
Sbjct: 705  EMLINLFNCLESTFAICLVCNDPPEEPVITMCGHVFCYQCVSEYLTGDDNTCPSVNCKEL 764

Query: 356  LGTDVVFAKATLRNCISGEWHDDITCLSEVVDNSLALQNMYTSSKIRAALEILERYCKPK 535
            +G D+VF+KATLR+CIS +        S + D SL  Q  YTSSKI+A LE+L+  CK K
Sbjct: 765  IGDDLVFSKATLRSCISDDGGSVSFANSHLCDYSLVQQRDYTSSKIKAVLEVLQSNCKLK 824

Query: 536  NLSNGRYGSEGHRGNSCSSETKYLECSSSDVCGAIVTAQ-----PEKPDKAIVFSQWTGM 700
              S+    S G   +S S +  ++E   SDV     T +      E P KAIVFSQWT M
Sbjct: 825  ISSSDLPNSSGGCRDSPSLDNLHVEDCDSDVRVTKHTRRYSESTTEGPIKAIVFSQWTSM 884

Query: 701  LDLVETSLNHSSIQYRRFDGTMSLASRDKAVKDFNNDPEVTVMLMSLKAGNLGLNMVAAC 880
            LDLVETSL    IQYRR DG M+L +RDKAVKDFN +PE+TVMLMSLKAGNLGLNMVAAC
Sbjct: 885  LDLVETSLKQFGIQYRRLDGRMTLGARDKAVKDFNTEPEITVMLMSLKAGNLGLNMVAAC 944

Query: 881  RVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILSLQEEKRKMVASAF 1060
             VILLDLWWNPTTEDQA+DRAHRIGQTRPVTV+R+TIKDTVEDRIL+LQ++KRKMVASAF
Sbjct: 945  HVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQDDKRKMVASAF 1004

Query: 1061 GEDQTGGSATRLTVEDLRYLFMV 1129
            GED  G S TRLTV+DL+YLFMV
Sbjct: 1005 GEDHAGASGTRLTVDDLKYLFMV 1027


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