BLASTX nr result

ID: Coptis24_contig00020100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020100
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297954.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002324404.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]    81   1e-13
emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    80   2e-13

>ref|XP_002297954.1| predicted protein [Populus trichocarpa] gi|222845212|gb|EEE82759.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = -1

Query: 280 LKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRTLPGSTEGTTIA--NPAFMQWFQ 107
           +KL+ DNY  WL Q+ P L G +   YVDG+ P PP T+  + +G TI   NPAF+ W  
Sbjct: 24  VKLTRDNYPLWLPQIVPHLRGGNLFGYVDGTTPPPPSTVSSTIDGVTITSPNPAFLHWTI 83

Query: 106 TDQLIISYITSTLTQSMLALLSDITTSQAVWSSL 5
            DQ+I+  I STLT+ ML  ++  TT+++ W++L
Sbjct: 84  QDQIILGAINSTLTEKMLTHVTRCTTTRSAWTTL 117


>ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|222839595|gb|EEE77932.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
 Frame = -1

Query: 310 SLSAPNVGHFLKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRT-LPGSTEGT-TI 137
           S  + N+  F KL+  NY+TWL+Q++P+L+G     YVDG+ P P  T L   T+ T +I
Sbjct: 6   SALSQNIAQFTKLTETNYLTWLQQIKPYLHGAKLWGYVDGTIPEPSLTILTTDTQSTRSI 65

Query: 136 ANPAFMQWFQTDQLIISYITSTLTQSMLALLSDITTSQAVWSSL 5
            NP    WF  DQ I+S +T+TLT+++  L     TS+A+W  L
Sbjct: 66  PNPDHASWFIIDQQIVSILTTTLTENIAQLTIGFDTSKAIWDCL 109


>ref|XP_002324404.1| predicted protein [Populus trichocarpa] gi|222865838|gb|EEF02969.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
 Frame = -1

Query: 280 LKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRTLPGSTEG--TTIANPAFMQWFQ 107
           +KL+ DNY  WL Q+ P L G +   YVD S P PP T+  + +G  TT  NP F+ W +
Sbjct: 24  VKLTRDNYPLWLPQIVPHLRGRNLFGYVDDSTPPPPSTVSSTIDGVTTTSPNPVFLHWTK 83

Query: 106 TDQLIISYITSTLTQSMLALLSDITTSQAVWSSL 5
            DQ+I+  I STLT+ ML  +   TTS + W++L
Sbjct: 84  QDQIILGAINSTLTEKMLTHVIRCTTSISAWTTL 117


>emb|CAN73349.1| hypothetical protein VITISV_009748 [Vitis vinifera]
          Length = 424

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/98 (34%), Positives = 57/98 (58%)
 Frame = -1

Query: 307 LSAPNVGHFLKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRTLPGSTEGTTIANP 128
           L+   + + +KL+  NY++W  QME  L G+D  K++DGSHP PP T+  +T      NP
Sbjct: 20  LTMITIHNSIKLTPTNYLSWKTQMEAILIGYDLQKFIDGSHPAPPTTI--TTNNVVFTNP 77

Query: 127 AFMQWFQTDQLIISYITSTLTQSMLALLSDITTSQAVW 14
           A+  W + D+L+   +  TL+ +++ L++   TS   W
Sbjct: 78  AYQTWLRQDKLLFGALVGTLSPTLIPLITQSKTSYEAW 115


>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/101 (34%), Positives = 57/101 (56%)
 Frame = -1

Query: 307 LSAPNVGHFLKLSGDNYITWLRQMEPFLYGHDFMKYVDGSHPTPPRTLPGSTEGTTIANP 128
           L+   + + +KL+  NY +W  QME  L G+D  K++DGSHP PP T+  +T      NP
Sbjct: 7   LTMITIHNSIKLTPTNYFSWKTQMEAILIGYDLQKFIDGSHPAPPTTI--TTNNVVSTNP 64

Query: 127 AFMQWFQTDQLIISYITSTLTQSMLALLSDITTSQAVWSSL 5
           A+  W + D+L+   +  TL+ +++ L++   TS   W  L
Sbjct: 65  AYQTWLRQDKLLFGALVDTLSPTLVPLITQSKTSYEAWQIL 105


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