BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020099
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
emb|CBI20254.3| unnamed protein product [Vitis vinifera]               81   1e-13
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11

>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 41/62 (66%), Positives = 50/62 (80%)
 Frame = +1

Query: 1   KVRATMKERGVEKKCPGSSWIELEGNVEEFVASDKSHSMCEEICMLLDELDGQVKLRNYV 180
           K+R TMKE+GVEK+CPGSSWIE+E  V +F ASDKSH+  +EI  LL ELDGQ+KL  YV
Sbjct: 467 KIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELDGQMKLAGYV 526

Query: 181 PD 186
           P+
Sbjct: 527 PE 528


>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Vitis vinifera]
          Length = 464

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +1

Query: 4   VRATMKERGVEKKCPGSSWIELEGNVEEFVASDKSHSMCEEICMLLDELDGQVKLRNYVP 183
           +RATMKE GVEK  PGSSWIE++  + +F ASDKSH   +EI  LL ELDGQ+KL  YVP
Sbjct: 398 IRATMKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGYVP 457

Query: 184 DFSLV 198
           +   V
Sbjct: 458 ELGSV 462


>emb|CBI20254.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/65 (60%), Positives = 47/65 (72%)
 Frame = +1

Query: 4   VRATMKERGVEKKCPGSSWIELEGNVEEFVASDKSHSMCEEICMLLDELDGQVKLRNYVP 183
           +RATMKE GVEK  PGSSWIE++  + +F ASDKSH   +EI  LL ELDGQ+KL  YVP
Sbjct: 428 IRATMKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLASDEIYTLLVELDGQLKLSGYVP 487

Query: 184 DFSLV 198
           +   V
Sbjct: 488 ELGSV 492


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 36/66 (54%), Positives = 48/66 (72%)
 Frame = +1

Query: 4   VRATMKERGVEKKCPGSSWIELEGNVEEFVASDKSHSMCEEICMLLDELDGQVKLRNYVP 183
           +R+ MKE+GVEKK PGSSWIELEG + +F AS  SH   ++I  +L ELDGQ+KL  Y+ 
Sbjct: 526 IRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFILTELDGQLKLAGYIL 585

Query: 184 DFSLVS 201
           + S+ S
Sbjct: 586 EPSVCS 591


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 697

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 36/66 (54%), Positives = 48/66 (72%)
 Frame = +1

Query: 4   VRATMKERGVEKKCPGSSWIELEGNVEEFVASDKSHSMCEEICMLLDELDGQVKLRNYVP 183
           +R+ MKE+GVEKK PGSSWIELEG + +F AS  SH   ++I  +L ELDGQ+KL  Y+ 
Sbjct: 623 IRSMMKEKGVEKKYPGSSWIELEGTIHQFSASADSHPDSDKIYFVLTELDGQLKLAGYIL 682

Query: 184 DFSLVS 201
           + S+ S
Sbjct: 683 EPSVCS 688