BLASTX nr result
ID: Coptis24_contig00020069
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020069 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 150 8e-35 ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 149 2e-34 ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229... 133 1e-29 ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204... 133 1e-29 ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2... 130 8e-29 >ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera] gi|297734114|emb|CBI15361.3| unnamed protein product [Vitis vinifera] Length = 648 Score = 150 bits (380), Expect = 8e-35 Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 8/121 (6%) Frame = +2 Query: 95 CGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKAKHAVFINE 274 CGIC E+++ IRGW+DSC+HYFC++CIMEWAK+ESRCPMCK+RF I R K VF +E Sbjct: 53 CGICLLEDDRAIRGWVDSCDHYFCFVCIMEWAKVESRCPMCKRRFSTIRRPPKPGVFPSE 112 Query: 275 RVVNVPLRNQ--------TSQIYDPYEQVNCSQCHSSSDENXXXXXXXXXSAAHTYCVGL 430 R+VNVP+R+Q T+ DPY +V+C CH ++DE+ SAAHTYCVGL Sbjct: 113 RIVNVPVRDQAYHHFGNVTTGPSDPYAEVDCGICHGTADESFLLICDLCDSAAHTYCVGL 172 Query: 431 G 433 G Sbjct: 173 G 173 >ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] gi|223546200|gb|EEF47702.1| splicing factor, arginine/serine-rich 2,rnap interacting protein, putative [Ricinus communis] Length = 632 Score = 149 bits (376), Expect = 2e-34 Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 8/122 (6%) Frame = +2 Query: 92 VCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKAKHAVFIN 271 +CGIC SE +RG IDSC+HYFC++CIMEWAK+ESRCPMCK+RF I R K VF + Sbjct: 47 ICGICLSENWSAMRGQIDSCDHYFCFICIMEWAKIESRCPMCKRRFNNIHRPPKDGVFPS 106 Query: 272 ERVVNVPLRNQ--------TSQIYDPYEQVNCSQCHSSSDENXXXXXXXXXSAAHTYCVG 427 ER+VNVP R+Q T + +DPY QV CS CH++ DE+ SAAHTYCVG Sbjct: 107 ERLVNVPKRDQVYHLFGNTTVEPFDPYAQVQCSICHTAEDESLLLLCDLCDSAAHTYCVG 166 Query: 428 LG 433 LG Sbjct: 167 LG 168 >ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229274 [Cucumis sativus] Length = 398 Score = 133 bits (335), Expect = 1e-29 Identities = 61/121 (50%), Positives = 80/121 (66%), Gaps = 6/121 (4%) Frame = +2 Query: 92 VCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKAKHAVFIN 271 +C ICFSE+ K RG +DSC+HYFC++CIMEWA++ESRCP CK RF + R AK + Sbjct: 55 ICVICFSEDGKAERGKLDSCDHYFCFVCIMEWARIESRCPACKGRFTVVHRIAKDPCRLR 114 Query: 272 ERVVNVPLRNQ------TSQIYDPYEQVNCSQCHSSSDENXXXXXXXXXSAAHTYCVGLG 433 ER+VN+P+RNQ +++I DPY + C+ C DE SAAHT+CVGLG Sbjct: 115 ERIVNIPMRNQDQSASGSARIGDPYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVGLG 174 Query: 434 A 436 A Sbjct: 175 A 175 >ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204928 [Cucumis sativus] Length = 375 Score = 133 bits (335), Expect = 1e-29 Identities = 61/121 (50%), Positives = 80/121 (66%), Gaps = 6/121 (4%) Frame = +2 Query: 92 VCGICFSEEEKTIRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKAKHAVFIN 271 +C ICFSE+ K RG +DSC+HYFC++CIMEWA++ESRCP CK RF + R AK + Sbjct: 55 ICVICFSEDGKAERGKLDSCDHYFCFVCIMEWARIESRCPACKGRFTVVHRIAKDPCRLR 114 Query: 272 ERVVNVPLRNQ------TSQIYDPYEQVNCSQCHSSSDENXXXXXXXXXSAAHTYCVGLG 433 ER+VN+P+RNQ +++I DPY + C+ C DE SAAHT+CVGLG Sbjct: 115 ERIVNIPMRNQDQSASGSARIGDPYAETCCTVCKGMEDEGLMLLCDLCDSAAHTFCVGLG 174 Query: 434 A 436 A Sbjct: 175 A 175 >ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1| predicted protein [Populus trichocarpa] Length = 810 Score = 130 bits (328), Expect = 8e-29 Identities = 61/125 (48%), Positives = 80/125 (64%), Gaps = 11/125 (8%) Frame = +2 Query: 92 VCGICFSEEEKT-IRGWIDSCNHYFCYLCIMEWAKLESRCPMCKQRFKEIVRKAKHAVFI 268 VCGIC SEE+K +RG +D C+HYFC+ CIMEW+K+ESRCP+CKQRF I + + A+ + Sbjct: 321 VCGICLSEEDKRRLRGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFSTIAKNGRSAMGV 380 Query: 269 NER--VVNVPLRNQTSQ--------IYDPYEQVNCSQCHSSSDENXXXXXXXXXSAAHTY 418 + R V+ VP+R+Q Q DPYE V C +CH D+ S+AHTY Sbjct: 381 DLRNMVIEVPMRDQVYQPTEEEIRSYIDPYENVICKECHEGGDDGLMLLCDLCDSSAHTY 440 Query: 419 CVGLG 433 CVGLG Sbjct: 441 CVGLG 445