BLASTX nr result

ID: Coptis24_contig00020067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020067
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511832.1| r2r3-myb transcription factor, putative [Ric...   362   1e-97
ref|XP_002320117.1| predicted protein [Populus trichocarpa] gi|2...   360   3e-97
ref|XP_002301350.1| predicted protein [Populus trichocarpa] gi|2...   353   4e-95
ref|XP_002270529.1| PREDICTED: myb-related protein 306 isoform 1...   348   2e-93
emb|CAN75438.1| hypothetical protein VITISV_000834 [Vitis vinifera]   345   1e-92

>ref|XP_002511832.1| r2r3-myb transcription factor, putative [Ricinus communis]
            gi|223549012|gb|EEF50501.1| r2r3-myb transcription
            factor, putative [Ricinus communis]
          Length = 308

 Score =  362 bits (929), Expect = 1e-97
 Identities = 191/311 (61%), Positives = 220/311 (70%), Gaps = 5/311 (1%)
 Frame = -2

Query: 1270 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1091
            MGR PCC+K+GLKKGPWTPEEDE+LV YIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
Sbjct: 1    MGRTPCCDKKGLKKGPWTPEEDEVLVSYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 60

Query: 1090 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 911
            LRPDIKRGPFT+EEEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLL MG
Sbjct: 61   LRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCMG 120

Query: 910  LDPHTHSPSSPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVEK 731
            LDP TH P +  GP   + A P+TRHMAQWESARLEAEARLS+ES +F     N  + +K
Sbjct: 121  LDPQTHEPFTSCGPYITAPASPATRHMAQWESARLEAEARLSRESSLF-----NPPTPKK 175

Query: 730  PDCDYFLRIWNSEVGKSFRRL----AAQETXXXXXXXXXXSTKYGVCSGV-SAEVKQFNA 566
             DCDYFLRIWNSEVG+SFR+      A             STKYG  S + + ++    A
Sbjct: 176  TDCDYFLRIWNSEVGESFRKFHRGDKASCQSPASASQASSSTKYGSVSALTTVDISPNIA 235

Query: 565  GACTEVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEIS 386
            G+ T  S+Q+ED E KSCK   Y + + AG                     DFP  +++S
Sbjct: 236  GSSTPPSDQIEDTECKSCK--SYVEDMNAGSDSSSSIELEDSSDSTLQLLLDFPINNDMS 293

Query: 385  FFQGHINNYSS 353
            F +G  N+Y S
Sbjct: 294  FLEG--NSYFS 302


>ref|XP_002320117.1| predicted protein [Populus trichocarpa] gi|222860890|gb|EEE98432.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  360 bits (925), Expect = 3e-97
 Identities = 186/309 (60%), Positives = 217/309 (70%), Gaps = 3/309 (0%)
 Frame = -2

Query: 1270 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1091
            MGR PCC+K GLKKG WTPEEDE+LV YIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
Sbjct: 1    MGRTPCCDKNGLKKGAWTPEEDELLVSYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 60

Query: 1090 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 911
            LRPDIKR PFT+EEEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLL +G
Sbjct: 61   LRPDIKRHPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCLG 120

Query: 910  LDPHTHSPSSPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVEK 731
            LDP TH P +  GP     A P+TRHM QWESARLEAEARLS+ES +F           K
Sbjct: 121  LDPQTHEPFTSRGPANKGPASPATRHMTQWESARLEAEARLSRESSLFLPPIPG-----K 175

Query: 730  PDCDYFLRIWNSEVGKSFRRL---AAQETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGA 560
             DCDYFLRIWNSEVG+SFRR+    A+            STK G  S ++A++    AG+
Sbjct: 176  IDCDYFLRIWNSEVGESFRRINMGGAKTACPSPVSQASSSTKCGSISAITADISPNLAGS 235

Query: 559  CTEVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFF 380
                SNQ EDME KSC+ +   + V+AG                     DFP  +++SF 
Sbjct: 236  SAAASNQNEDMECKSCRSD--AEDVMAGPDSSSSAESEDSTDSTLQLLLDFPINNDMSFL 293

Query: 379  QGHINNYSS 353
            +G+I++Y++
Sbjct: 294  EGNIDSYAT 302


>ref|XP_002301350.1| predicted protein [Populus trichocarpa] gi|222843076|gb|EEE80623.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  353 bits (907), Expect = 4e-95
 Identities = 187/309 (60%), Positives = 218/309 (70%), Gaps = 3/309 (0%)
 Frame = -2

Query: 1270 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1091
            MGR PCC+K+GLKKGPWTPEED++LV YIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY
Sbjct: 1    MGRTPCCDKKGLKKGPWTPEEDDLLVTYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 60

Query: 1090 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 911
            LRPDIKRGPFT+EEEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLL +G
Sbjct: 61   LRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCLG 120

Query: 910  LDPHTHSPSSPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVEK 731
            LDP TH P S  GP     A P+TRHMAQWESARLEAE RLS+ES +F         VEK
Sbjct: 121  LDPQTHEPFSSRGPVNKGPASPATRHMAQWESARLEAEKRLSRESSLFLPPM-----VEK 175

Query: 730  PDCDYFLRIWNSEVGKSFRRLAA---QETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGA 560
             DCD+FLRIWNSEVG+SFRR+     +            STK G  S +SA++    + +
Sbjct: 176  IDCDHFLRIWNSEVGESFRRINMGDNKTACQSPVSQASSSTKCGSISAISADIIPNLSRS 235

Query: 559  CTEVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFF 380
                SNQ EDME+KS K   Y + V+AG                     DFP  +++SF 
Sbjct: 236  PATASNQNEDMEWKSPK--SYAEDVLAG-SDSSSAELEDLTDSTLQLLLDFPINNDMSFL 292

Query: 379  QGHINNYSS 353
              +I++Y++
Sbjct: 293  DKNIDSYAT 301


>ref|XP_002270529.1| PREDICTED: myb-related protein 306 isoform 1 [Vitis vinifera]
            gi|297745245|emb|CBI40325.3| unnamed protein product
            [Vitis vinifera]
          Length = 302

 Score =  348 bits (892), Expect = 2e-93
 Identities = 184/316 (58%), Positives = 212/316 (67%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1270 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1091
            MGR PCC+K+GLKKGPWTPEED+ILVDYI KNGHGSWRSLPK AGLLRCGKSCRLRWTNY
Sbjct: 1    MGRTPCCDKRGLKKGPWTPEEDQILVDYINKNGHGSWRSLPKNAGLLRCGKSCRLRWTNY 60

Query: 1090 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 911
            LRPDIKRGPFT +EEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLLGMG
Sbjct: 61   LRPDIKRGPFTTDEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLGMG 120

Query: 910  LDPHTHSPS-SPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVE 734
            LDP TH PS +  GP     + PSTRHMAQWESARLEAEARLS+ESL+       L    
Sbjct: 121  LDPQTHEPSATSCGPIAKPPSSPSTRHMAQWESARLEAEARLSRESLLSNPPPPPL--GR 178

Query: 733  KPDCDYFLRIWNSEVGKSFRRLAAQETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGACT 554
              D DYFLR+WNSEVG+SFR    + T          STK G  SGV+          C 
Sbjct: 179  NNDSDYFLRLWNSEVGESFRNKGQKPTCQSPVSQASSSTKCGSVSGVT------TMETCP 232

Query: 553  EVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFFQG 374
             VSN++ED               +AG                     DFP  +++SF +G
Sbjct: 233  TVSNKIEDT----------PQNAMAGSDCSSTNELEDSSDTALQLLFDFPVNNDMSFLEG 282

Query: 373  HINNYSSMFPSLMMES 326
            +++ Y + FP+++ ES
Sbjct: 283  NLDTYPT-FPAMLSES 297


>emb|CAN75438.1| hypothetical protein VITISV_000834 [Vitis vinifera]
          Length = 302

 Score =  345 bits (886), Expect = 1e-92
 Identities = 183/316 (57%), Positives = 211/316 (66%), Gaps = 1/316 (0%)
 Frame = -2

Query: 1270 MGRAPCCEKQGLKKGPWTPEEDEILVDYIKKNGHGSWRSLPKLAGLLRCGKSCRLRWTNY 1091
            MGR PCC+K+GLKKGPWTPEED+ILVDYI KNGHGSWRSLPK AGLLRCGKSCRLRWTNY
Sbjct: 1    MGRTPCCDKRGLKKGPWTPEEDQILVDYINKNGHGSWRSLPKNAGLLRCGKSCRLRWTNY 60

Query: 1090 LRPDIKRGPFTVEEEKTIIQLHGILGNRWASIASQLPGRTDNEIKNFWNTHLKKRLLGMG 911
            LRPDIKRGPFT +EEK +IQLHGILGNRWA+IASQLPGRTDNEIKN WNTHLKKRLLGMG
Sbjct: 61   LRPDIKRGPFTTDEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLGMG 120

Query: 910  LDPHTHSPS-SPLGPNPVSSAFPSTRHMAQWESARLEAEARLSKESLMFGSSQSNLLSVE 734
            LDP TH PS +  GP     + PSTRHMAQWESARLEAEARLS+ESL+       L    
Sbjct: 121  LDPQTHEPSATSCGPIAKPPSSPSTRHMAQWESARLEAEARLSRESLLSNPPPPPL--GR 178

Query: 733  KPDCDYFLRIWNSEVGKSFRRLAAQETXXXXXXXXXXSTKYGVCSGVSAEVKQFNAGACT 554
              D DYFLR+WNSEVG+SFR    +            STK G  SGV+          C 
Sbjct: 179  NNDSDYFLRLWNSEVGESFRNKGQKPXCQSPVSQASSSTKCGSVSGVT------TMETCP 232

Query: 553  EVSNQLEDMEYKSCKLERYKDGVVAGXXXXXXXXXXXXXXXXXXXXXDFPGGDEISFFQG 374
             VSN++ED               +AG                     DFP  +++SF +G
Sbjct: 233  TVSNKIEDT----------PQNAMAGSDCSSTNELEDSSDTALQLLFDFPVNNDMSFLEG 282

Query: 373  HINNYSSMFPSLMMES 326
            +++ Y + FP+++ ES
Sbjct: 283  NLDTYPT-FPAMLSES 297


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