BLASTX nr result

ID: Coptis24_contig00020062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020062
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521339.1| conserved hypothetical protein [Ricinus comm...   221   5e-56
ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246...   216   2e-54
ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806...   208   3e-52
ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|2...   207   7e-52
ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801...   204   8e-51

>ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis]
           gi|223539417|gb|EEF41007.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  221 bits (563), Expect = 5e-56
 Identities = 118/169 (69%), Positives = 132/169 (78%)
 Frame = +2

Query: 2   NASKTLNNIVKLMNRPRPSLVCYSTKKNNPGFMDQILDYIEGGPKLRKWYGAPDMLPKDG 181
           N SK+L+           SLV  S KK   GFMDQILDYIEGGPKLRKWYGAPD+LPKDG
Sbjct: 21  NQSKSLDFSPIFHTTNNRSLVHCSAKKKI-GFMDQILDYIEGGPKLRKWYGAPDLLPKDG 79

Query: 182 SQXXXXXXXXXXXXTRDAVLVTDGDSEIGQMVILALIVKRARVKALVKDKRAAIEAYGTY 361
           S              RDA+LVTDGDSEIGQMVIL+LIVKRA+VKALVKDKR+A+EA+GTY
Sbjct: 80  STMQDEDEFSEEEEVRDAILVTDGDSEIGQMVILSLIVKRAKVKALVKDKRSAMEAFGTY 139

Query: 362 VESMAGDRSDSLFLKKALRGVRALICPNEGFLSNVGSTKGIEHVILLSQ 508
           VESMAGD S  LF+KKALRGVRA+ICP EGFLS+VGS KG++HVILLSQ
Sbjct: 140 VESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVGSLKGVKHVILLSQ 188


>ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera]
           gi|297743019|emb|CBI35886.3| unnamed protein product
           [Vitis vinifera]
          Length = 303

 Score =  216 bits (550), Expect = 2e-54
 Identities = 109/151 (72%), Positives = 123/151 (81%)
 Frame = +2

Query: 56  SLVCYSTKKNNPGFMDQILDYIEGGPKLRKWYGAPDMLPKDGSQXXXXXXXXXXXXTRDA 235
           SLVC S KK   GF+DQILDYIEGGPKLRKWYGAPD+LPKDGS              RDA
Sbjct: 37  SLVCCSAKKK-AGFVDQILDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEVEEDRDA 95

Query: 236 VLVTDGDSEIGQMVILALIVKRARVKALVKDKRAAIEAYGTYVESMAGDRSDSLFLKKAL 415
           VLVTDGDSEIGQMVIL+LIVKR+R+KALVKDKRAA+EA+GTYVESMAGD +D  F +KAL
Sbjct: 96  VLVTDGDSEIGQMVILSLIVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKAL 155

Query: 416 RGVRALICPNEGFLSNVGSTKGIEHVILLSQ 508
           RGVR +ICPNEG +SN GS  G++H+ILLSQ
Sbjct: 156 RGVRTIICPNEGSISNFGSLMGVQHIILLSQ 186


>ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max]
          Length = 312

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/152 (68%), Positives = 125/152 (82%)
 Frame = +2

Query: 53  PSLVCYSTKKNNPGFMDQILDYIEGGPKLRKWYGAPDMLPKDGSQXXXXXXXXXXXXTRD 232
           P +VC++ KK +  FM+QILDYIEGGPKLRKWYGAPD+L KDG+              RD
Sbjct: 46  PLVVCHAKKKLS--FMEQILDYIEGGPKLRKWYGAPDILEKDGTAIEDNEDDYPEDEVRD 103

Query: 233 AVLVTDGDSEIGQMVILALIVKRARVKALVKDKRAAIEAYGTYVESMAGDRSDSLFLKKA 412
           AVLVTDGDSE+GQMVIL+LIVK+ARVK LVKDKR A+EA+G+YVESMAGD SD  F+KKA
Sbjct: 104 AVLVTDGDSEMGQMVILSLIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKA 163

Query: 413 LRGVRALICPNEGFLSNVGSTKGIEHVILLSQ 508
           LRGVR +ICPNEGFLS+VGS +G++HVI+LS+
Sbjct: 164 LRGVRTIICPNEGFLSSVGSLQGVQHVIVLSR 195


>ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  207 bits (527), Expect = 7e-52
 Identities = 106/145 (73%), Positives = 118/145 (81%), Gaps = 2/145 (1%)
 Frame = +2

Query: 80  KNNPGFMDQILDYIEGGPKLRKWYGAPDMLPKDGS--QXXXXXXXXXXXXTRDAVLVTDG 253
           K    F+DQILDYIEGGPKLRKWYGAPD+LPKDGS  +             RDAVLVTDG
Sbjct: 45  KKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSDTEDEDELPGNALNEVRDAVLVTDG 104

Query: 254 DSEIGQMVILALIVKRARVKALVKDKRAAIEAYGTYVESMAGDRSDSLFLKKALRGVRAL 433
           DSEIGQM+IL+LIVK+ARVKALVKDKR A+EA+GTYVESMAGD S   FLKKALRGVRA+
Sbjct: 105 DSEIGQMIILSLIVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAI 164

Query: 434 ICPNEGFLSNVGSTKGIEHVILLSQ 508
           ICPNEGFLSN G  +G++HVILLSQ
Sbjct: 165 ICPNEGFLSNGGDLQGVKHVILLSQ 189


>ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max]
          Length = 316

 Score =  204 bits (518), Expect = 8e-51
 Identities = 108/157 (68%), Positives = 125/157 (79%), Gaps = 5/157 (3%)
 Frame = +2

Query: 53  PSLV-CYSTKKNNPGFMDQILDYIEGGPKLRKWYGAPDMLPKDGS----QXXXXXXXXXX 217
           PSLV C++ KK +  FM+QILDYIEGGPKLRKWYGAPD+L KDG+               
Sbjct: 45  PSLVVCHAKKKLS--FMEQILDYIEGGPKLRKWYGAPDILEKDGTAIEDDEDDYPGEQIE 102

Query: 218 XXTRDAVLVTDGDSEIGQMVILALIVKRARVKALVKDKRAAIEAYGTYVESMAGDRSDSL 397
              RDAVLVTDGDSE GQMVIL+LIVK+ARVK LVKDKR A+EA+G+YVESMAGD SD  
Sbjct: 103 DEVRDAVLVTDGDSETGQMVILSLIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKR 162

Query: 398 FLKKALRGVRALICPNEGFLSNVGSTKGIEHVILLSQ 508
           FLKKALRGVR +ICPNEGFLS+VGS +G++HVI+LSQ
Sbjct: 163 FLKKALRGVRTIICPNEGFLSSVGSLQGVQHVIVLSQ 199


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