BLASTX nr result

ID: Coptis24_contig00020059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020059
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33861.1| unknown [Medicago truncatula]                          133   1e-29
emb|CBI27628.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_004159684.1| PREDICTED: LOW QUALITY PROTEIN: probable sig...   131   6e-29
ref|XP_004135313.1| PREDICTED: probable signal peptidase complex...   130   1e-28
ref|XP_002279312.1| PREDICTED: probable signal peptidase complex...   130   1e-28

>gb|AFK33861.1| unknown [Medicago truncatula]
          Length = 93

 Score =  133 bits (335), Expect = 1e-29
 Identities = 58/79 (73%), Positives = 70/79 (88%)
 Frame = +3

Query: 27  MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 206
           MDW+GQKLAEQLMQILL++FAV+AFG GY   SFQ M+ +YA GVILTTL+T+PNWPFFN
Sbjct: 1   MDWEGQKLAEQLMQILLLAFAVIAFGAGYITASFQTMILIYAGGVILTTLVTIPNWPFFN 60

Query: 207 YHPLKWLESIDAEKYPKPE 263
           +HPLKWL+  +AEK+PKPE
Sbjct: 61  HHPLKWLDPSEAEKHPKPE 79


>emb|CBI27628.3| unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/85 (71%), Positives = 71/85 (83%)
 Frame = +3

Query: 9   ESEKEKMDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVP 188
           E E   MDWQGQKLAEQLMQ LL++FAVVAF  GY +GSFQMML +YA GV LTTLITVP
Sbjct: 9   EKENTIMDWQGQKLAEQLMQTLLLAFAVVAFVAGYSLGSFQMMLLIYAGGVALTTLITVP 68

Query: 189 NWPFFNYHPLKWLESIDAEKYPKPE 263
           NWPFFN HPLKWL+S + +++PKP+
Sbjct: 69  NWPFFNRHPLKWLDSSEVDRHPKPQ 93


>ref|XP_004159684.1| PREDICTED: LOW QUALITY PROTEIN: probable signal peptidase complex
           subunit 1-like [Cucumis sativus]
          Length = 93

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +3

Query: 27  MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 206
           MDWQGQKLAEQLMQ++LV+FAVVAF  GY +GSF++M+ VYA GV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQLMLVAFAVVAFXTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 60

Query: 207 YHPLKWLESIDAEKYPKPE 263
            HPLKWL+   AEKYPKP+
Sbjct: 61  RHPLKWLDPSLAEKYPKPQ 79


>ref|XP_004135313.1| PREDICTED: probable signal peptidase complex subunit 1-like isoform
           1 [Cucumis sativus] gi|449435061|ref|XP_004135314.1|
           PREDICTED: probable signal peptidase complex subunit
           1-like isoform 2 [Cucumis sativus]
           gi|449435063|ref|XP_004135315.1| PREDICTED: probable
           signal peptidase complex subunit 1-like isoform 3
           [Cucumis sativus]
          Length = 93

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +3

Query: 27  MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 206
           MDWQGQKLAEQLMQ++LV+FAVVAF  GY +GSF++M+ VYA GV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 60

Query: 207 YHPLKWLESIDAEKYPKPE 263
            HPLKWL+   AEKYPKP+
Sbjct: 61  RHPLKWLDPSLAEKYPKPQ 79


>ref|XP_002279312.1| PREDICTED: probable signal peptidase complex subunit 1-like [Vitis
           vinifera]
          Length = 91

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = +3

Query: 27  MDWQGQKLAEQLMQILLVSFAVVAFGVGYYIGSFQMMLYVYAVGVILTTLITVPNWPFFN 206
           MDWQGQKLAEQLMQ LL++FAVVAF  GY +GSFQMML +YA GV LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQTLLLAFAVVAFVAGYSLGSFQMMLLIYAGGVALTTLITVPNWPFFN 60

Query: 207 YHPLKWLESIDAEKYPKPE 263
            HPLKWL+S + +++PKP+
Sbjct: 61  RHPLKWLDSSEVDRHPKPQ 79


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