BLASTX nr result

ID: Coptis24_contig00020052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020052
         (1868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis...   657   0.0  
ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|2...   650   0.0  
ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus ...   649   0.0  
ref|NP_567450.1| SNARE associated Golgi protein [Arabidopsis tha...   625   e-176
gb|AAL24087.1| unknown protein [Arabidopsis thaliana]                 623   e-176

>ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera]
            gi|297737027|emb|CBI26228.3| unnamed protein product
            [Vitis vinifera]
          Length = 439

 Score =  657 bits (1694), Expect = 0.0
 Identities = 320/414 (77%), Positives = 364/414 (87%), Gaps = 1/414 (0%)
 Frame = +3

Query: 267  ISGLREKHQLELENLTLTAAPFKMLKFFTLATAQYLTRSITYLLTKGGWLLFLSVLILAF 446
            ISGLRE+ Q E+ENLTL   PFK+LKFF L   Q++ +S+ YLL KGGW++ LSV+ +A 
Sbjct: 24   ISGLRERQQQEMENLTLKTEPFKVLKFFILVVVQHVKQSVAYLLAKGGWVMLLSVVAMAL 83

Query: 447  GVLLITIDGPHEKHVEELLHYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 626
            G +L+ IDGPHEKHV+EL  YF FGLWW+ALG+ASSIGLGSGLHTFVLYLGPHIALFTIK
Sbjct: 84   GFVLMAIDGPHEKHVQELHQYFLFGLWWIALGIASSIGLGSGLHTFVLYLGPHIALFTIK 143

Query: 627  AMQCGRVDLKSAPYDTIQLKRVPSWLDKDCSDFGPPVFPSLHGLRVPLSSILPQVQLEAI 806
            AMQCGRVD+KSAPYDTI+LK  PSWLDKDCS+FGPPVF SLH LRVPLSSILPQVQ+EA+
Sbjct: 144  AMQCGRVDIKSAPYDTIRLKSGPSWLDKDCSEFGPPVFSSLHALRVPLSSILPQVQVEAV 203

Query: 807  LWGIGTALGELPPYFISRAARISGTKFDAMEELDASSPE-DGVLSNRLTQIKRWFLSHSQ 983
            LWGIGTALGELPPYFIS+AA +SG+K DA+EELDASSPE DGV+S  L QIKRWFLSHSQ
Sbjct: 204  LWGIGTALGELPPYFISKAASLSGSKSDAIEELDASSPEDDGVVSTHLKQIKRWFLSHSQ 263

Query: 984  HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATLIGKAIIKTHIQTVFIISVCN 1163
            HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLAT IGKAIIKTHIQTVFIISVCN
Sbjct: 264  HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATFIGKAIIKTHIQTVFIISVCN 323

Query: 1164 NQLLGWMENEMIWVLGFVPGLSSILPSLIAKLHMVKEKYLTTQSPSPVPSDVKVKSWDLS 1343
            NQLL W+ENE+IWVL  +PG +S+LP+LI+KL+ +++KYL   SP PVPS++KVK WDLS
Sbjct: 324  NQLLDWIENELIWVLSLIPGFASVLPNLISKLNAMRDKYL-APSP-PVPSNMKVKKWDLS 381

Query: 1344 FASIWNTIVWLMLINFFIKIVSATAQRYLKKQQDKELRALTDSLSASQQSNGKS 1505
            FASIWNT+VWLMLINFF KIV+ATAQ +LKKQQ+KEL AL D LS S  SN +S
Sbjct: 382  FASIWNTVVWLMLINFFFKIVTATAQNFLKKQQEKELLALKDELSESTVSNDQS 435


>ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|222852344|gb|EEE89891.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  650 bits (1677), Expect = 0.0
 Identities = 314/408 (76%), Positives = 350/408 (85%), Gaps = 1/408 (0%)
 Frame = +3

Query: 276  LREKHQLELENLTLTAAPFKMLKFFTLATAQYLTRSITYLLTKGGWLLFLSVLILAFGVL 455
            +RE+HQ ELENLTLTA PFK LKFF LA  QY  RS+ YLL KGGWL+ LS ++ A GV+
Sbjct: 8    IRERHQQELENLTLTAQPFKTLKFFALAMVQYCKRSVFYLLAKGGWLMLLSTVVAAVGVV 67

Query: 456  LITIDGPHEKHVEELLHYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAMQ 635
            L+TID PHEKHVEEL HY RFGLWW+ALGVASSIGLGSGLHTFV+YLGPHIALFTIKAMQ
Sbjct: 68   LVTIDSPHEKHVEELSHYLRFGLWWIALGVASSIGLGSGLHTFVMYLGPHIALFTIKAMQ 127

Query: 636  CGRVDLKSAPYDTIQLKRVPSWLDKDCSDFGPPVFPSLHGLRVPLSSILPQVQLEAILWG 815
            CGRVDLKSAPYDTIQLKR PSWLD+DC ++G PVFP  HGLRVPLSSILPQVQ+EAILWG
Sbjct: 128  CGRVDLKSAPYDTIQLKRGPSWLDRDCHEYGDPVFPLSHGLRVPLSSILPQVQVEAILWG 187

Query: 816  IGTALGELPPYFISRAARISGTKFDAMEELDASSPED-GVLSNRLTQIKRWFLSHSQHLN 992
            +GTALGELPPYFISRAAR+SG+  DAMEELDASS  D G+++ RL  IK W L+HSQHLN
Sbjct: 188  VGTALGELPPYFISRAARMSGSNLDAMEELDASSDGDSGIVAARLKAIKHWLLNHSQHLN 247

Query: 993  FFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQL 1172
            FFTILVLASVPNPLFDLAGIMCGQFG+PFWKFFLATLIGKAI+KTHIQTVFIISVCNNQL
Sbjct: 248  FFTILVLASVPNPLFDLAGIMCGQFGVPFWKFFLATLIGKAIVKTHIQTVFIISVCNNQL 307

Query: 1173 LGWMENEMIWVLGFVPGLSSILPSLIAKLHMVKEKYLTTQSPSPVPSDVKVKSWDLSFAS 1352
            L W+ENE+IWVLG VPG  S LP L AKLH +KEKY+    P+   +D+KVK WD SF  
Sbjct: 308  LNWIENELIWVLGLVPGFDSALPDLTAKLHAMKEKYMAPAPPA--SADIKVKKWDFSFTG 365

Query: 1353 IWNTIVWLMLINFFIKIVSATAQRYLKKQQDKELRALTDSLSASQQSN 1496
            IWNT+VWLML+NFF KIV+ATAQ YLKKQQ+KEL ALT+  SAS  S+
Sbjct: 366  IWNTVVWLMLLNFFFKIVNATAQMYLKKQQEKELAALTNRASASTHSD 413


>ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus communis]
            gi|223543858|gb|EEF45384.1| vacuole membrane protein,
            putative [Ricinus communis]
          Length = 427

 Score =  649 bits (1675), Expect = 0.0
 Identities = 314/409 (76%), Positives = 353/409 (86%), Gaps = 1/409 (0%)
 Frame = +3

Query: 273  GLREKHQLELENLTLTAAPFKMLKFFTLATAQYLTRSITYLLTKGGWLLFLSVLILAFGV 452
            GL E+ Q ELENLTLT  P K LKFF LA  QY  +S+ YLL KGGWL+ LS+++ A G+
Sbjct: 21   GLHERQQQELENLTLTTQPLKTLKFFILAMIQYFKKSVLYLLAKGGWLMLLSIMVAAIGI 80

Query: 453  LLITIDGPHEKHVEELLHYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 632
            LL+TIDGPHEKH++EL HY RFGLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM
Sbjct: 81   LLVTIDGPHEKHIDELSHYSRFGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTIKAM 140

Query: 633  QCGRVDLKSAPYDTIQLKRVPSWLDKDCSDFGPPVFPSLHGLRVPLSSILPQVQLEAILW 812
            QCGRVDLKSA YDTIQLKR PSWLDKDC +FG PVFP  HGLRVPLSSILPQVQ+EA+LW
Sbjct: 141  QCGRVDLKSAIYDTIQLKRGPSWLDKDCHEFGDPVFPLSHGLRVPLSSILPQVQIEAVLW 200

Query: 813  GIGTALGELPPYFISRAARISGTKFDAMEELDASSPED-GVLSNRLTQIKRWFLSHSQHL 989
            G+GTALGELPPYFISRAA +SG+K DAMEEL+ASS ED G ++  L  IKRW LSHSQHL
Sbjct: 201  GVGTALGELPPYFISRAASVSGSKVDAMEELNASSSEDSGFIATHLNAIKRWLLSHSQHL 260

Query: 990  NFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATLIGKAIIKTHIQTVFIISVCNNQ 1169
            NFFTILVLASVPNPLFDLAGIMCGQFGI FWKFF ATLIGKAIIKTHIQTVFIISVCNNQ
Sbjct: 261  NFFTILVLASVPNPLFDLAGIMCGQFGISFWKFFFATLIGKAIIKTHIQTVFIISVCNNQ 320

Query: 1170 LLGWMENEMIWVLGFVPGLSSILPSLIAKLHMVKEKYLTTQSPSPVPSDVKVKSWDLSFA 1349
            LL WMENE+IWVL FVPGL+S+LP++IAKLH +KEKY+      PV S  KVK WD SFA
Sbjct: 321  LLNWMENELIWVLSFVPGLASVLPNIIAKLHTIKEKYMA--PAPPVSSSNKVKKWDFSFA 378

Query: 1350 SIWNTIVWLMLINFFIKIVSATAQRYLKKQQDKELRALTDSLSASQQSN 1496
            ++WNTIVWLML+NFF KIV+ATAQRYLKKQQ+K+L  LT+++S+S  S+
Sbjct: 379  ALWNTIVWLMLLNFFFKIVNATAQRYLKKQQEKQLAELTNNVSSSTHSD 427


>ref|NP_567450.1| SNARE associated Golgi protein [Arabidopsis thaliana]
            gi|53749170|gb|AAU90070.1| At4g14950 [Arabidopsis
            thaliana] gi|332658128|gb|AEE83528.1| SNARE associated
            Golgi protein [Arabidopsis thaliana]
          Length = 416

 Score =  625 bits (1611), Expect = e-176
 Identities = 301/403 (74%), Positives = 343/403 (85%), Gaps = 1/403 (0%)
 Frame = +3

Query: 267  ISGLREKHQLELENLTLTAAPFKMLKFFTLATAQYLTRSITYLLTKGGWLLFLSVLILAF 446
            IS LREKH+ E+ENLTLT  P   LK F  AT QY+ RSI+YLL  GGW + ++ L++  
Sbjct: 15   ISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVS 74

Query: 447  GVLLITIDGPHEKHVEELLHYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 626
            G LL+T+DGPH KHVEE+L Y R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT+K
Sbjct: 75   GGLLVTVDGPHGKHVEEVLEYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLK 134

Query: 627  AMQCGRVDLKSAPYDTIQLKRVPSWLDKDCSDFGPPVFPSLHGLRVPLSSILPQVQLEAI 806
            A  CGRVDLKSAPYDTIQLKRVPSWLDK CS+FGPP+  S  G RVPL+SILPQVQLEAI
Sbjct: 135  ATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAI 194

Query: 807  LWGIGTALGELPPYFISRAARISGTKFDAMEELDASSPED-GVLSNRLTQIKRWFLSHSQ 983
            LWGIGTALGELPPYFISRAA ISG+  D MEELD SS ED G ++  L ++KRW L+HSQ
Sbjct: 195  LWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQ 254

Query: 984  HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATLIGKAIIKTHIQTVFIISVCN 1163
            HLNFFT+LVLASVPNPLFDLAGIMCGQFGIPFW+FFLATLIGKAIIKTHIQT+FII VCN
Sbjct: 255  HLNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCN 314

Query: 1164 NQLLGWMENEMIWVLGFVPGLSSILPSLIAKLHMVKEKYLTTQSPSPVPSDVKVKSWDLS 1343
            NQLL WMENE+IW+L  VPGL+S+LP L AKLH +KEKY+   +PSPVPS +KVK WD S
Sbjct: 315  NQLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYI--DAPSPVPSHIKVKKWDFS 372

Query: 1344 FASIWNTIVWLMLINFFIKIVSATAQRYLKKQQDKELRALTDS 1472
            FASIWN IVWLML+NFF+KIV+ATAQR+LKK+Q+KE+  LT S
Sbjct: 373  FASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLTHS 415


>gb|AAL24087.1| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score =  623 bits (1606), Expect = e-176
 Identities = 300/403 (74%), Positives = 343/403 (85%), Gaps = 1/403 (0%)
 Frame = +3

Query: 267  ISGLREKHQLELENLTLTAAPFKMLKFFTLATAQYLTRSITYLLTKGGWLLFLSVLILAF 446
            IS LREKH+ E+ENLTLT  P   LK F  AT QY+ RSI+YLL  GGW + ++ L++  
Sbjct: 15   ISALREKHEKEVENLTLTTQPLNTLKLFVEATIQYIKRSISYLLAHGGWFILITTLLVVS 74

Query: 447  GVLLITIDGPHEKHVEELLHYFRFGLWWVALGVASSIGLGSGLHTFVLYLGPHIALFTIK 626
            G LL+T+DGPH KHVEE+L Y R+GLWW+ALGVASSIGLGSGLHTFVLYLGPHIALFT+K
Sbjct: 75   GGLLVTVDGPHGKHVEEVLGYVRYGLWWIALGVASSIGLGSGLHTFVLYLGPHIALFTLK 134

Query: 627  AMQCGRVDLKSAPYDTIQLKRVPSWLDKDCSDFGPPVFPSLHGLRVPLSSILPQVQLEAI 806
            A  CGRVDLKSAPYDTIQLKRVPSWLDK CS+FGPP+  S  G RVPL+SILPQVQLEAI
Sbjct: 135  ATLCGRVDLKSAPYDTIQLKRVPSWLDKSCSEFGPPLMISAAGSRVPLTSILPQVQLEAI 194

Query: 807  LWGIGTALGELPPYFISRAARISGTKFDAMEELDASSPED-GVLSNRLTQIKRWFLSHSQ 983
            LWGIGTALGELPPYFISRAA ISG+  D MEELD SS ED G ++  L ++KRW L+HSQ
Sbjct: 195  LWGIGTALGELPPYFISRAASISGSTVDGMEELDGSSTEDSGFMATHLNRVKRWLLTHSQ 254

Query: 984  HLNFFTILVLASVPNPLFDLAGIMCGQFGIPFWKFFLATLIGKAIIKTHIQTVFIISVCN 1163
            HLNFFT+LVLASVPNPLFDLAGIMCGQFGIPFW+FFLATLIGKAIIKTHIQT+FII VCN
Sbjct: 255  HLNFFTVLVLASVPNPLFDLAGIMCGQFGIPFWEFFLATLIGKAIIKTHIQTIFIICVCN 314

Query: 1164 NQLLGWMENEMIWVLGFVPGLSSILPSLIAKLHMVKEKYLTTQSPSPVPSDVKVKSWDLS 1343
            NQLL WMENE+IW+L  VPGL+S+LP L AKLH +KEKY+   +PSPVPS +KVK WD S
Sbjct: 315  NQLLDWMENELIWILSHVPGLASMLPGLTAKLHAMKEKYI--DAPSPVPSHIKVKKWDFS 372

Query: 1344 FASIWNTIVWLMLINFFIKIVSATAQRYLKKQQDKELRALTDS 1472
            FASIWN +VWLML+NFF+KIV+ATAQR+LKK+Q+KE+  LT S
Sbjct: 373  FASIWNGMVWLMLLNFFVKIVTATAQRHLKKKQEKEMATLTHS 415


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