BLASTX nr result
ID: Coptis24_contig00020051
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020051 (203 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510953.1| conserved hypothetical protein [Ricinus comm... 99 4e-19 ref|XP_002267657.1| PREDICTED: conserved oligomeric Golgi comple... 97 2e-18 ref|XP_002304412.1| predicted protein [Populus trichocarpa] gi|2... 96 3e-18 ref|XP_002438832.1| hypothetical protein SORBIDRAFT_10g026850 [S... 95 7e-18 dbj|BAD45448.1| oligomeric golgi complex 7-like [Oryza sativa Ja... 93 3e-17 >ref|XP_002510953.1| conserved hypothetical protein [Ricinus communis] gi|223550068|gb|EEF51555.1| conserved hypothetical protein [Ricinus communis] Length = 832 Score = 99.0 bits (245), Expect = 4e-19 Identities = 46/55 (83%), Positives = 51/55 (92%) Frame = +2 Query: 2 LSALSMPIPPVLATFHTCFSTPRDQLRDLVKSDAGNQLDIPTAQLACRIRRVTLD 166 LSALSMPIPP+LATFHTC STPRDQL+ LVKSDAGNQLD+PTA L C+IRRV+LD Sbjct: 778 LSALSMPIPPILATFHTCLSTPRDQLKYLVKSDAGNQLDLPTANLVCKIRRVSLD 832 >ref|XP_002267657.1| PREDICTED: conserved oligomeric Golgi complex subunit 7 [Vitis vinifera] gi|296084209|emb|CBI24597.3| unnamed protein product [Vitis vinifera] Length = 838 Score = 96.7 bits (239), Expect = 2e-18 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = +2 Query: 2 LSALSMPIPPVLATFHTCFSTPRDQLRDLVKSDAGNQLDIPTAQLACRIRRVTLD 166 LSALSMPIPP+LATFH+C STPRDQL+D VKSDAGNQLD+PTA L C+IRRV L+ Sbjct: 784 LSALSMPIPPILATFHSCLSTPRDQLKDFVKSDAGNQLDLPTANLVCKIRRVGLE 838 >ref|XP_002304412.1| predicted protein [Populus trichocarpa] gi|222841844|gb|EEE79391.1| predicted protein [Populus trichocarpa] Length = 788 Score = 95.9 bits (237), Expect = 3e-18 Identities = 44/55 (80%), Positives = 50/55 (90%) Frame = +2 Query: 2 LSALSMPIPPVLATFHTCFSTPRDQLRDLVKSDAGNQLDIPTAQLACRIRRVTLD 166 LSALSMPIPP+LATFHTC STPRDQL+ LVKSD+GNQLD+ TA L C+IRRV+LD Sbjct: 734 LSALSMPIPPILATFHTCLSTPRDQLKQLVKSDSGNQLDLSTANLVCKIRRVSLD 788 >ref|XP_002438832.1| hypothetical protein SORBIDRAFT_10g026850 [Sorghum bicolor] gi|241917055|gb|EER90199.1| hypothetical protein SORBIDRAFT_10g026850 [Sorghum bicolor] Length = 820 Score = 94.7 bits (234), Expect = 7e-18 Identities = 42/55 (76%), Positives = 49/55 (89%) Frame = +2 Query: 2 LSALSMPIPPVLATFHTCFSTPRDQLRDLVKSDAGNQLDIPTAQLACRIRRVTLD 166 LSALSMPIPP L+TFH C STPRDQ+RDL+KSD G+QLD+PTA L C+IRR+TLD Sbjct: 766 LSALSMPIPPFLSTFHACVSTPRDQVRDLIKSDGGSQLDLPTAHLVCKIRRITLD 820 >dbj|BAD45448.1| oligomeric golgi complex 7-like [Oryza sativa Japonica Group] Length = 873 Score = 92.8 bits (229), Expect = 3e-17 Identities = 41/53 (77%), Positives = 48/53 (90%) Frame = +2 Query: 2 LSALSMPIPPVLATFHTCFSTPRDQLRDLVKSDAGNQLDIPTAQLACRIRRVT 160 LSALSMPIPP LATFHTC STPRDQ+RDL+KSD G+QLD+PTA L C+IRR++ Sbjct: 818 LSALSMPIPPFLATFHTCISTPRDQVRDLIKSDGGSQLDLPTAHLVCKIRRIS 870