BLASTX nr result
ID: Coptis24_contig00020050
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020050 (419 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21102.3| unnamed protein product [Vitis vinifera] 175 4e-42 ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera] 174 5e-42 ref|XP_003603331.1| Neurochondrin [Medicago truncatula] gi|35549... 161 6e-38 ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|2... 159 3e-37 ref|XP_002515468.1| conserved hypothetical protein [Ricinus comm... 157 6e-37 >emb|CBI21102.3| unnamed protein product [Vitis vinifera] Length = 713 Score = 175 bits (443), Expect = 4e-42 Identities = 94/139 (67%), Positives = 114/139 (82%), Gaps = 5/139 (3%) Frame = +1 Query: 13 LLSLAF*YRSKKMEECLKLLKGEGDEQKLAGLLLSTKFCKGDDHHSILKIYNAVGPGFLD 192 +LSL+ +S +E+CLKLLKGE DEQ+LAGLLL TKFCKGDD+ ++ ++YNAVG GFLD Sbjct: 80 ILSLSM-EQSPSLEDCLKLLKGERDEQRLAGLLLVTKFCKGDDNAALRRVYNAVGIGFLD 138 Query: 193 RLLKTGMGNNVES---GDIKEAYLQLSVTILAAICRVPEIARSKDMVSKVPYILDIL--K 357 RLL+TGMG S GD ++AYLQLSVT+LAA CRVPEIA S+DMV K+P IL+IL + Sbjct: 139 RLLRTGMGKGTISSSGGDNRDAYLQLSVTVLAAFCRVPEIASSEDMVLKIPLILEILSKQ 198 Query: 358 NGSVVVEECYEFLFLVSTS 414 +GS VVEECYEFLFLVSTS Sbjct: 199 SGSHVVEECYEFLFLVSTS 217 >ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera] Length = 629 Score = 174 bits (442), Expect = 5e-42 Identities = 91/131 (69%), Positives = 109/131 (83%), Gaps = 5/131 (3%) Frame = +1 Query: 37 RSKKMEECLKLLKGEGDEQKLAGLLLSTKFCKGDDHHSILKIYNAVGPGFLDRLLKTGMG 216 +S +E+CLKLLKGE DEQ+LAGLLL TKFCKGDD+ ++ ++YNAVG GFLDRLL+TGMG Sbjct: 3 QSPSLEDCLKLLKGERDEQRLAGLLLVTKFCKGDDNAALRRVYNAVGIGFLDRLLRTGMG 62 Query: 217 NNVES---GDIKEAYLQLSVTILAAICRVPEIARSKDMVSKVPYILDIL--KNGSVVVEE 381 S GD ++AYLQLSVT+LAA CRVPEIA S+DMV K+P IL+IL ++GS VVEE Sbjct: 63 KGTISSSGGDNRDAYLQLSVTVLAAFCRVPEIASSEDMVLKIPLILEILSKQSGSHVVEE 122 Query: 382 CYEFLFLVSTS 414 CYEFLFLVSTS Sbjct: 123 CYEFLFLVSTS 133 >ref|XP_003603331.1| Neurochondrin [Medicago truncatula] gi|355492379|gb|AES73582.1| Neurochondrin [Medicago truncatula] Length = 620 Score = 161 bits (407), Expect = 6e-38 Identities = 83/131 (63%), Positives = 104/131 (79%), Gaps = 5/131 (3%) Frame = +1 Query: 40 SKKMEECLKLLKGEGDEQKLAGLLLSTKFCKGDDHHSILKIYNAVGPGFLDRLLKTGMGN 219 S +E+CLKLLKGE DEQ+LAGLLL TKFCK DDH S+ K+YNAVG FL+RLL+TGMG Sbjct: 8 SLNLEDCLKLLKGERDEQRLAGLLLVTKFCKADDHSSLRKVYNAVGFRFLERLLRTGMGK 67 Query: 220 NVESGD---IKEAYLQLSVTILAAICRVPEIARSKDMVSKVPYILDIL--KNGSVVVEEC 384 S D ++AYL LSVT+LAA+CRVPEIA S+DM S +P IL+++ ++GS V+EEC Sbjct: 68 GAISSDGDNNRDAYLSLSVTVLAALCRVPEIASSEDMTSMIPLILEVMSTRSGSSVLEEC 127 Query: 385 YEFLFLVSTSS 417 EFL+LVST+S Sbjct: 128 CEFLYLVSTAS 138 >ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|222866323|gb|EEF03454.1| predicted protein [Populus trichocarpa] Length = 618 Score = 159 bits (401), Expect = 3e-37 Identities = 81/128 (63%), Positives = 104/128 (81%), Gaps = 2/128 (1%) Frame = +1 Query: 37 RSKKMEECLKLLKGEGDEQKLAGLLLSTKFCKGDDHHSILKIYNAVGPGFLDRLLKTGMG 216 ++ +++CLKLLKGE DEQ+LAGLLL TKFC GDD S+ K+YNAVG FLDRLL+TG Sbjct: 4 QTPSLDDCLKLLKGERDEQRLAGLLLVTKFCNGDDLVSLRKVYNAVGVHFLDRLLRTGNA 63 Query: 217 NNVESGDIKEAYLQLSVTILAAICRVPEIARSKDMVSKVPYILDILK--NGSVVVEECYE 390 ++ GD ++ YLQLSVT+LAA CRVP+IA SK+MVSK+P IL+I+ +GS V+EECYE Sbjct: 64 SS-SGGDNRDMYLQLSVTVLAAFCRVPDIAASKEMVSKIPLILEIMPEVSGSPVLEECYE 122 Query: 391 FLFLVSTS 414 FL+LV+TS Sbjct: 123 FLYLVTTS 130 >ref|XP_002515468.1| conserved hypothetical protein [Ricinus communis] gi|223545412|gb|EEF46917.1| conserved hypothetical protein [Ricinus communis] Length = 631 Score = 157 bits (398), Expect = 6e-37 Identities = 81/131 (61%), Positives = 102/131 (77%), Gaps = 4/131 (3%) Frame = +1 Query: 37 RSKKMEECLKLLKGEGDEQKLAGLLLSTKFCKGDDHHSILKIYNAVGPGFLDRLLKTGMG 216 +S +++CLKLLKGE DEQ+LAGLLL TKFCKGDD S+ ++Y+A G FLDRLL+TGMG Sbjct: 7 KSPSIDDCLKLLKGERDEQRLAGLLLVTKFCKGDDAVSLRRVYDAAGVRFLDRLLRTGMG 66 Query: 217 NNV---ESGDIKEAYLQLSVTILAAICRVPEIARSKDMVSKVPYILDIL-KNGSVVVEEC 384 ++AYLQLS+T+LAA CRVPEIA SKDMV K+P IL+I+ ++GS+V EEC Sbjct: 67 KGAIKDNGASNRDAYLQLSITVLAAFCRVPEIASSKDMVLKIPLILEIMSESGSLVWEEC 126 Query: 385 YEFLFLVSTSS 417 YEFL+LV SS Sbjct: 127 YEFLYLVVVSS 137