BLASTX nr result

ID: Coptis24_contig00020049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020049
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]     66   3e-09
emb|CBI21102.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]        63   2e-08
ref|XP_003603331.1| Neurochondrin [Medicago truncatula] gi|35549...    63   2e-08

>ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|222866323|gb|EEF03454.1|
           predicted protein [Populus trichocarpa]
          Length = 618

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = -1

Query: 148 VKRSVVVEECYEFLFLVSTSSEEGFAAFYESRGVNVLANNMPTLPDGSH 2
           V  S V+EECYEFL+LV+TS E+G   FYES G+ VLA+ M +LPDGSH
Sbjct: 111 VSGSPVLEECYEFLYLVTTSYEDGATTFYESGGMKVLASQMSSLPDGSH 159


>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
          Length = 629

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 139 SVVVEECYEFLFLVSTSSEEGFAAFYESRGVNVLANNMPTLPDGSH 2
           S VVEECYEFLFLVSTS E+G +A Y+S G+ VLA+ M TL DGSH
Sbjct: 117 SHVVEECYEFLFLVSTSCEDGVSALYKSGGLRVLASQMSTLADGSH 162


>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/46 (69%), Positives = 37/46 (80%)
 Frame = -1

Query: 139 SVVVEECYEFLFLVSTSSEEGFAAFYESRGVNVLANNMPTLPDGSH 2
           S VVEECYEFLFLVSTS E+G +A Y+S G+ VLA+ M TL DGSH
Sbjct: 201 SHVVEECYEFLFLVSTSCEDGVSALYKSGGLRVLASQMSTLADGSH 246


>ref|XP_003518905.1| PREDICTED: neurochondrin-like [Glycine max]
          Length = 616

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = -1

Query: 133 VVEECYEFLFLVSTSSEEGFAAFYESRGVNVLANNMPTLPDGSH 2
           V+EECYEFL+LVS +SE GFA F+ES G+ +LA+ M +L DGSH
Sbjct: 112 VLEECYEFLYLVSAASESGFARFFESGGIKMLASQMRSLQDGSH 155


>ref|XP_003603331.1| Neurochondrin [Medicago truncatula] gi|355492379|gb|AES73582.1|
           Neurochondrin [Medicago truncatula]
          Length = 620

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = -1

Query: 139 SVVVEECYEFLFLVSTSSEEGFAAFYESRGVNVLANNMPTLPDGSH 2
           S V+EEC EFL+LVST+SE G   FYESRG+ + A+ +P++ DGSH
Sbjct: 121 SSVLEECCEFLYLVSTASENGITRFYESRGIKIAASQLPSMEDGSH 166


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