BLASTX nr result

ID: Coptis24_contig00020044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020044
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|2...   140   6e-31
ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vini...   132   1e-28
emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera]   132   1e-28
ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [R...   131   3e-28
ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-26

>ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|222838052|gb|EEE76417.1|
            predicted protein [Populus trichocarpa]
          Length = 212

 Score =  140 bits (353), Expect = 6e-31
 Identities = 88/215 (40%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
 Frame = -1

Query: 1113 MSKPSQPNYGTIPTAXXXXXXXT---------LQFITNAKQNGQSIISTRRPWREXXXXX 961
            MS+ +Q  YGTIPT        T         L FI+    + Q++I+TRRPW+E     
Sbjct: 1    MSRKAQAGYGTIPTTISATTTTTTKSPQSPTTLTFISRVSTSTQTLIATRRPWQEL---- 56

Query: 960  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYT 781
                                         +  S+F RP NYN+A++RIK NV +FRVNY 
Sbjct: 57   -----------------------------IKLSSFIRPNNYNDAISRIKFNVNYFRVNYA 87

Query: 780  XXXXXXXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTV 601
                       LWHPISM                RD  VVVFN   +DRVVL VL  VT+
Sbjct: 88   MIFLAILFLSLLWHPISMIVFIVMFVAWLFLYFGRDGPVVVFNKSLDDRVVLCVLGLVTI 147

Query: 600  LVLAFTHVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496
            L L FTHVGLNVL++LI+G  IV VHAAFRGT+DL
Sbjct: 148  LALVFTHVGLNVLIALIIGVVIVGVHAAFRGTEDL 182


>ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vinifera]
          Length = 206

 Score =  132 bits (333), Expect = 1e-28
 Identities = 83/210 (39%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
 Frame = -1

Query: 1113 MSKPSQPNYGTIPTAXXXXXXXTLQ----FITNAKQNGQSIISTRRPWREXXXXXXXXXX 946
            MS  S   YGT+P A       +      FI+ A Q  Q++++TRRPWRE          
Sbjct: 1    MSLKSPAGYGTLPNASAAVPSSSTSEQFTFISRATQRTQTLMATRRPWREF--------- 51

Query: 945  XXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXX 766
                                    +D S  SRP+NY++AM RIK NV +FRVNY      
Sbjct: 52   ------------------------LDYSVLSRPHNYSDAMARIKRNVNYFRVNYAMVMLF 87

Query: 765  XXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTVLVLAF 586
                  LWHP SM               FRD  VV+F+   +DRVVL +L  +TV+ L F
Sbjct: 88   ILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVF 147

Query: 585  THVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496
            T VGLNVLVSLI+G  +V +HAAFRGT+DL
Sbjct: 148  TDVGLNVLVSLIIGVAVVGLHAAFRGTEDL 177


>emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera]
          Length = 206

 Score =  132 bits (333), Expect = 1e-28
 Identities = 83/210 (39%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
 Frame = -1

Query: 1113 MSKPSQPNYGTIPTAXXXXXXXTLQ----FITNAKQNGQSIISTRRPWREXXXXXXXXXX 946
            MS  S   YGT+P A       +      FI+ A Q  Q++++TRRPWRE          
Sbjct: 1    MSLKSPAGYGTLPNASPAVPSSSTSEQFTFISRATQRTQTLMATRRPWREF--------- 51

Query: 945  XXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXX 766
                                    +D S  SRP+NY++AM RIK NV +FRVNY      
Sbjct: 52   ------------------------LDYSALSRPHNYSDAMARIKRNVNYFRVNYAMVMLF 87

Query: 765  XXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTVLVLAF 586
                  LWHP SM               FRD  VV+F+   +DRVVL +L  +TV+ L F
Sbjct: 88   ILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVF 147

Query: 585  THVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496
            T VGLNVLVSLI+G  +V +HAAFRGT+DL
Sbjct: 148  TDVGLNVLVSLIIGVAVVGLHAAFRGTEDL 177


>ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [Ricinus communis]
            gi|223529112|gb|EEF31092.1| Prenylated Rab acceptor
            protein, putative [Ricinus communis]
          Length = 216

 Score =  131 bits (330), Expect = 3e-28
 Identities = 74/183 (40%), Positives = 98/183 (53%)
 Frame = -1

Query: 1044 LQFITNAKQNGQSIISTRRPWREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDP 865
            L FI+ A    QS+I+TRRPW+E                                  ++P
Sbjct: 36   LTFISRATSATQSVIATRRPWKEL---------------------------------LNP 62

Query: 864  STFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXXXXX 685
            S+FS P NY+EAM+R+K NV +FRVNY            LWHP+SM              
Sbjct: 63   SSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLSVLFLSLLWHPVSMIVFIVVFIAWFFLY 122

Query: 684  XFRDEEVVVFNWKFNDRVVLGVLSFVTVLVLAFTHVGLNVLVSLIVGAFIVSVHAAFRGT 505
              RD  +V+FN +F+DRVVL VL  VT++ L  THVGLNVLV+L++GA +V +H AFR T
Sbjct: 123  FSRDGPIVLFNREFDDRVVLVVLGLVTIVALVLTHVGLNVLVALMIGAVVVGIHGAFRNT 182

Query: 504  DDL 496
            +DL
Sbjct: 183  EDL 185


>ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|222857078|gb|EEE94625.1|
            predicted protein [Populus trichocarpa]
          Length = 201

 Score =  125 bits (313), Expect = 3e-26
 Identities = 73/212 (34%), Positives = 108/212 (50%)
 Frame = -1

Query: 1131 LVSRLTMSKPSQPNYGTIPTAXXXXXXXTLQFITNAKQNGQSIISTRRPWREXXXXXXXX 952
            ++S      P+   Y ++P+A          F+T +     +  +TRRPWRE        
Sbjct: 1    MISSYPAPAPAPDPYDSLPSAAAPST-----FLTRSANTTTNFFATRRPWREL------- 48

Query: 951  XXXXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXX 772
                                      ++ S+F+RP ++ EA  R+K N+Y+FRVNYT   
Sbjct: 49   --------------------------IEFSSFTRPLSFGEATIRVKRNLYYFRVNYTMII 82

Query: 771  XXXXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTVLVL 592
                    LWHP+SM               FRD+ +V+F+   +DRVVLG+LS VT++ L
Sbjct: 83   LVILFLSLLWHPLSMIVFLVVFVAWFFLYFFRDQPLVIFHRPIDDRVVLGLLSIVTIIAL 142

Query: 591  AFTHVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496
             FTHV LNVLVS+++GA +V +HAAFRGT++L
Sbjct: 143  IFTHVWLNVLVSVLIGAAVVVLHAAFRGTENL 174


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