BLASTX nr result
ID: Coptis24_contig00020044
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00020044 (1152 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|2... 140 6e-31 ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vini... 132 1e-28 emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera] 132 1e-28 ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [R... 131 3e-28 ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|2... 125 3e-26 >ref|XP_002328337.1| predicted protein [Populus trichocarpa] gi|222838052|gb|EEE76417.1| predicted protein [Populus trichocarpa] Length = 212 Score = 140 bits (353), Expect = 6e-31 Identities = 88/215 (40%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Frame = -1 Query: 1113 MSKPSQPNYGTIPTAXXXXXXXT---------LQFITNAKQNGQSIISTRRPWREXXXXX 961 MS+ +Q YGTIPT T L FI+ + Q++I+TRRPW+E Sbjct: 1 MSRKAQAGYGTIPTTISATTTTTTKSPQSPTTLTFISRVSTSTQTLIATRRPWQEL---- 56 Query: 960 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYT 781 + S+F RP NYN+A++RIK NV +FRVNY Sbjct: 57 -----------------------------IKLSSFIRPNNYNDAISRIKFNVNYFRVNYA 87 Query: 780 XXXXXXXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTV 601 LWHPISM RD VVVFN +DRVVL VL VT+ Sbjct: 88 MIFLAILFLSLLWHPISMIVFIVMFVAWLFLYFGRDGPVVVFNKSLDDRVVLCVLGLVTI 147 Query: 600 LVLAFTHVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496 L L FTHVGLNVL++LI+G IV VHAAFRGT+DL Sbjct: 148 LALVFTHVGLNVLIALIIGVVIVGVHAAFRGTEDL 182 >ref|XP_002264376.1| PREDICTED: PRA1 family protein E [Vitis vinifera] Length = 206 Score = 132 bits (333), Expect = 1e-28 Identities = 83/210 (39%), Positives = 105/210 (50%), Gaps = 4/210 (1%) Frame = -1 Query: 1113 MSKPSQPNYGTIPTAXXXXXXXTLQ----FITNAKQNGQSIISTRRPWREXXXXXXXXXX 946 MS S YGT+P A + FI+ A Q Q++++TRRPWRE Sbjct: 1 MSLKSPAGYGTLPNASAAVPSSSTSEQFTFISRATQRTQTLMATRRPWREF--------- 51 Query: 945 XXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXX 766 +D S SRP+NY++AM RIK NV +FRVNY Sbjct: 52 ------------------------LDYSVLSRPHNYSDAMARIKRNVNYFRVNYAMVMLF 87 Query: 765 XXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTVLVLAF 586 LWHP SM FRD VV+F+ +DRVVL +L +TV+ L F Sbjct: 88 ILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVF 147 Query: 585 THVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496 T VGLNVLVSLI+G +V +HAAFRGT+DL Sbjct: 148 TDVGLNVLVSLIIGVAVVGLHAAFRGTEDL 177 >emb|CAN73850.1| hypothetical protein VITISV_021777 [Vitis vinifera] Length = 206 Score = 132 bits (333), Expect = 1e-28 Identities = 83/210 (39%), Positives = 105/210 (50%), Gaps = 4/210 (1%) Frame = -1 Query: 1113 MSKPSQPNYGTIPTAXXXXXXXTLQ----FITNAKQNGQSIISTRRPWREXXXXXXXXXX 946 MS S YGT+P A + FI+ A Q Q++++TRRPWRE Sbjct: 1 MSLKSPAGYGTLPNASPAVPSSSTSEQFTFISRATQRTQTLMATRRPWREF--------- 51 Query: 945 XXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXX 766 +D S SRP+NY++AM RIK NV +FRVNY Sbjct: 52 ------------------------LDYSALSRPHNYSDAMARIKRNVNYFRVNYAMVMLF 87 Query: 765 XXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTVLVLAF 586 LWHP SM FRD VV+F+ +DRVVL +L +TV+ L F Sbjct: 88 ILFVSLLWHPTSMIVFLIIFVAWFFLYFFRDNPVVLFHQTIDDRVVLVLLGLITVVALVF 147 Query: 585 THVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496 T VGLNVLVSLI+G +V +HAAFRGT+DL Sbjct: 148 TDVGLNVLVSLIIGVAVVGLHAAFRGTEDL 177 >ref|XP_002531279.1| Prenylated Rab acceptor protein, putative [Ricinus communis] gi|223529112|gb|EEF31092.1| Prenylated Rab acceptor protein, putative [Ricinus communis] Length = 216 Score = 131 bits (330), Expect = 3e-28 Identities = 74/183 (40%), Positives = 98/183 (53%) Frame = -1 Query: 1044 LQFITNAKQNGQSIISTRRPWREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDP 865 L FI+ A QS+I+TRRPW+E ++P Sbjct: 36 LTFISRATSATQSVIATRRPWKEL---------------------------------LNP 62 Query: 864 STFSRPYNYNEAMTRIKTNVYHFRVNYTXXXXXXXXXXXLWHPISMXXXXXXXXXXXXXX 685 S+FS P NY+EAM+R+K NV +FRVNY LWHP+SM Sbjct: 63 SSFSCPCNYSEAMSRVKYNVNYFRVNYAMVVLSVLFLSLLWHPVSMIVFIVVFIAWFFLY 122 Query: 684 XFRDEEVVVFNWKFNDRVVLGVLSFVTVLVLAFTHVGLNVLVSLIVGAFIVSVHAAFRGT 505 RD +V+FN +F+DRVVL VL VT++ L THVGLNVLV+L++GA +V +H AFR T Sbjct: 123 FSRDGPIVLFNREFDDRVVLVVLGLVTIVALVLTHVGLNVLVALMIGAVVVGIHGAFRNT 182 Query: 504 DDL 496 +DL Sbjct: 183 EDL 185 >ref|XP_002307629.1| predicted protein [Populus trichocarpa] gi|222857078|gb|EEE94625.1| predicted protein [Populus trichocarpa] Length = 201 Score = 125 bits (313), Expect = 3e-26 Identities = 73/212 (34%), Positives = 108/212 (50%) Frame = -1 Query: 1131 LVSRLTMSKPSQPNYGTIPTAXXXXXXXTLQFITNAKQNGQSIISTRRPWREXXXXXXXX 952 ++S P+ Y ++P+A F+T + + +TRRPWRE Sbjct: 1 MISSYPAPAPAPDPYDSLPSAAAPST-----FLTRSANTTTNFFATRRPWREL------- 48 Query: 951 XXXXXXXXXXXXXXXXXXXXXXXXXXVDPSTFSRPYNYNEAMTRIKTNVYHFRVNYTXXX 772 ++ S+F+RP ++ EA R+K N+Y+FRVNYT Sbjct: 49 --------------------------IEFSSFTRPLSFGEATIRVKRNLYYFRVNYTMII 82 Query: 771 XXXXXXXXLWHPISMXXXXXXXXXXXXXXXFRDEEVVVFNWKFNDRVVLGVLSFVTVLVL 592 LWHP+SM FRD+ +V+F+ +DRVVLG+LS VT++ L Sbjct: 83 LVILFLSLLWHPLSMIVFLVVFVAWFFLYFFRDQPLVIFHRPIDDRVVLGLLSIVTIIAL 142 Query: 591 AFTHVGLNVLVSLIVGAFIVSVHAAFRGTDDL 496 FTHV LNVLVS+++GA +V +HAAFRGT++L Sbjct: 143 IFTHVWLNVLVSVLIGAAVVVLHAAFRGTENL 174