BLASTX nr result

ID: Coptis24_contig00020043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020043
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatul...   144   1e-32
ref|XP_003522546.1| PREDICTED: phosphomevalonate kinase-like [Gl...   141   5e-32
ref|XP_003526704.1| PREDICTED: phosphomevalonate kinase-like [Gl...   137   7e-31
gb|ACU17839.1| unknown [Glycine max]                                  137   7e-31
dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]       137   1e-30

>ref|XP_003602220.1| Phosphomevalonate kinase [Medicago truncatula]
           gi|355491268|gb|AES72471.1| Phosphomevalonate kinase
           [Medicago truncatula]
          Length = 508

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/121 (59%), Positives = 93/121 (76%)
 Frame = +1

Query: 1   GEXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQWESY 180
           GE          MVG+VKKWQ S+PQKS+E  + LSEANSALE QL LL K A+EQW++Y
Sbjct: 306 GEPGTGGSSTPSMVGSVKKWQKSDPQKSLETWRRLSEANSALEIQLNLLRKLAKEQWDAY 365

Query: 181 EHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIEPES 360
           + VI +CS LR ++W EQA+D  +EA++KALLG+++A+  IR+HMRLMG+ AGVPIEPES
Sbjct: 366 KSVIDNCSILRSDKWIEQASDSNKEAVIKALLGSKEAMVGIRYHMRLMGEAAGVPIEPES 425

Query: 361 Q 363
           Q
Sbjct: 426 Q 426


>ref|XP_003522546.1| PREDICTED: phosphomevalonate kinase-like [Glycine max]
          Length = 508

 Score =  141 bits (356), Expect = 5e-32
 Identities = 72/121 (59%), Positives = 90/121 (74%)
 Frame = +1

Query: 1   GEXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQWESY 180
           GE          MVGAVKKWQ S+PQKS++    LSEANSALE QL LL K A+EQW +Y
Sbjct: 306 GEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWTRLSEANSALEMQLNLLSKLAKEQWNAY 365

Query: 181 EHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIEPES 360
           + VI SCS LR ++W EQA++  +EA++KALLGA++A+  IR+HMRLMG+ AGVPIEPE 
Sbjct: 366 KSVIDSCSMLRPDKWIEQASEPNKEAVIKALLGAKEAMLGIRYHMRLMGEAAGVPIEPEP 425

Query: 361 Q 363
           Q
Sbjct: 426 Q 426


>ref|XP_003526704.1| PREDICTED: phosphomevalonate kinase-like [Glycine max]
          Length = 508

 Score =  137 bits (346), Expect = 7e-31
 Identities = 71/121 (58%), Positives = 89/121 (73%)
 Frame = +1

Query: 1   GEXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQWESY 180
           GE          MVGAVKKWQ S+PQKS++  + LSEANSALE QL LL K A+EQW +Y
Sbjct: 306 GEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWRRLSEANSALEMQLNLLSKLAKEQWNAY 365

Query: 181 EHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIEPES 360
           + VI SCS LR ++W EQA++  +EAI+KALLGA++A+  IR+ M  MG+ AGVPIEPES
Sbjct: 366 KSVIDSCSMLRSDKWIEQASEPNKEAIIKALLGAKEAMLGIRYRMSQMGEAAGVPIEPES 425

Query: 361 Q 363
           Q
Sbjct: 426 Q 426


>gb|ACU17839.1| unknown [Glycine max]
          Length = 289

 Score =  137 bits (346), Expect = 7e-31
 Identities = 71/121 (58%), Positives = 89/121 (73%)
 Frame = +1

Query: 1   GEXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQWESY 180
           GE          MVGAVKKWQ S+PQKS++  + LSEANSALE QL LL K A+EQW +Y
Sbjct: 117 GEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWRRLSEANSALEMQLNLLSKLAKEQWNAY 176

Query: 181 EHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIEPES 360
           + VI SCS LR ++W EQA++  +EAI+KALLGA++A+  IR+ M  MG+ AGVPIEPES
Sbjct: 177 KSVIDSCSMLRSDKWIEQASEPNKEAIIKALLGAKEAMLGIRYRMSQMGEAAGVPIEPES 236

Query: 361 Q 363
           Q
Sbjct: 237 Q 237


>dbj|BAF98284.1| 5-phosphomevelonate kinase [Hevea brasiliensis]
          Length = 503

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/121 (59%), Positives = 87/121 (71%)
 Frame = +1

Query: 1   GEXXXXXXXXXXMVGAVKKWQVSEPQKSMERRQMLSEANSALETQLKLLCKFAEEQWESY 180
           GE          MVGA+KKWQ S+ QKS E  + LSEANSALETQ  +L K AEE W++Y
Sbjct: 302 GEPGTGGSSTPSMVGALKKWQKSDTQKSQETWRKLSEANSALETQFNILSKLAEEHWDAY 361

Query: 181 EHVICSCSGLRCEQWKEQATDLFREAIVKALLGARDAVFQIRFHMRLMGKEAGVPIEPES 360
           + VI SCS    E+W EQAT+  REA+VKALLG+R+A+ QIR +MR MG+ AGVPIEPES
Sbjct: 362 KCVIDSCSTKNSEKWIEQATEPSREAVVKALLGSRNAMLQIRNYMRQMGEAAGVPIEPES 421

Query: 361 Q 363
           Q
Sbjct: 422 Q 422


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