BLASTX nr result

ID: Coptis24_contig00020041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020041
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602583.1| Secondary cell wall-related glycosyltransfer...    86   4e-15
ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245...    82   3e-14
emb|CBI19971.3| unnamed protein product [Vitis vinifera]               82   3e-14
emb|CBI37563.3| unnamed protein product [Vitis vinifera]               82   4e-14
ref|XP_002275240.1| PREDICTED: uncharacterized protein LOC100248...    82   4e-14

>ref|XP_003602583.1| Secondary cell wall-related glycosyltransferase family [Medicago
           truncatula] gi|355491631|gb|AES72834.1| Secondary cell
           wall-related glycosyltransferase family [Medicago
           truncatula]
          Length = 637

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/83 (51%), Positives = 58/83 (69%)
 Frame = -3

Query: 256 MRGANGTSPSPIEARHRLPNSMDETNKRRFLRSKDVEVEKPFHLPIQDKGSTCNKFLSLK 77
           MRG  GTSP  +EARHRLP+S+++  KR+  RSK  ++EKPFHL IQD+   C KF  LK
Sbjct: 1   MRGIMGTSPRSVEARHRLPSSIEDLYKRKVSRSKVKDLEKPFHLSIQDRNLRC-KFSFLK 59

Query: 76  VVLVIIIFGTFITLLRSPTAYHS 8
           ++L+I I  TF+  L SP  Y++
Sbjct: 60  LILLITISATFVMFLYSPEIYNT 82


>ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245489 [Vitis vinifera]
          Length = 637

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = -3

Query: 241 GTSPSPIEARHRLPNSMDETNKRRFLRSKDV-EVEKPFHLPIQDKGSTCNKFLSLKVVLV 65
           G SPSP+E R RL  S +E +KRR  RSKD  +VEK  H+PIQ++ S C KF +LK+VLV
Sbjct: 3   GPSPSPLETRLRLSASGEEGSKRRLQRSKDSKDVEKASHVPIQERNSNC-KFPTLKLVLV 61

Query: 64  IIIFGTFITLLRSPTAYHSE 5
           III GTF+TLL SP  ++++
Sbjct: 62  IIICGTFVTLLHSPAVHNTD 81


>emb|CBI19971.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = -3

Query: 241 GTSPSPIEARHRLPNSMDETNKRRFLRSKDV-EVEKPFHLPIQDKGSTCNKFLSLKVVLV 65
           G SPSP+E R RL  S +E +KRR  RSKD  +VEK  H+PIQ++ S C KF +LK+VLV
Sbjct: 3   GPSPSPLETRLRLSASGEEGSKRRLQRSKDSKDVEKASHVPIQERNSNC-KFPTLKLVLV 61

Query: 64  IIIFGTFITLLRSPTAYHSE 5
           III GTF+TLL SP  ++++
Sbjct: 62  IIICGTFVTLLHSPAVHNTD 81


>emb|CBI37563.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 45/73 (61%), Positives = 57/73 (78%)
 Frame = -3

Query: 241 GTSPSPIEARHRLPNSMDETNKRRFLRSKDVEVEKPFHLPIQDKGSTCNKFLSLKVVLVI 62
           G++ SPIEAR RL  S+++T KRR  RSK V+ EKPFH+PIQD+ + C KF +LK+VLVI
Sbjct: 2   GSTQSPIEARQRLSVSIEDTYKRRSQRSK-VKDEKPFHIPIQDRSTKC-KFPALKLVLVI 59

Query: 61  IIFGTFITLLRSP 23
           I+ GTFITL  SP
Sbjct: 60  IVCGTFITLFYSP 72


>ref|XP_002275240.1| PREDICTED: uncharacterized protein LOC100248912 [Vitis vinifera]
          Length = 636

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 45/73 (61%), Positives = 57/73 (78%)
 Frame = -3

Query: 241 GTSPSPIEARHRLPNSMDETNKRRFLRSKDVEVEKPFHLPIQDKGSTCNKFLSLKVVLVI 62
           G++ SPIEAR RL  S+++T KRR  RSK V+ EKPFH+PIQD+ + C KF +LK+VLVI
Sbjct: 2   GSTQSPIEARQRLSVSIEDTYKRRSQRSK-VKDEKPFHIPIQDRSTKC-KFPALKLVLVI 59

Query: 61  IIFGTFITLLRSP 23
           I+ GTFITL  SP
Sbjct: 60  IVCGTFITLFYSP 72


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