BLASTX nr result

ID: Coptis24_contig00020040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020040
         (1167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37301.3| unnamed protein product [Vitis vinifera]              317   3e-84
ref|XP_002265267.1| PREDICTED: uncharacterized protein LOC100244...   317   3e-84
ref|XP_002521109.1| conserved hypothetical protein [Ricinus comm...   314   2e-83
ref|XP_002301777.1| predicted protein [Populus trichocarpa] gi|2...   304   2e-80
ref|XP_003551433.1| PREDICTED: uncharacterized protein LOC100802...   288   2e-75

>emb|CBI37301.3| unnamed protein product [Vitis vinifera]
          Length = 511

 Score =  317 bits (813), Expect = 3e-84
 Identities = 164/278 (58%), Positives = 207/278 (74%)
 Frame = -1

Query: 1155 SEVLQISSQSVFVTWLEEELNLECKKHDKNILLMMLQKLKQDDNITKNIKRSGKDELYAD 976
            SE++Q   Q + + WLE+E   E +K DK +  +M +KL+ D +I + I+ SGK++L+A+
Sbjct: 234  SEIIQKLCQPICMAWLEKECT-ENRKADKALHTLMFEKLEGDTSILQKIRNSGKEDLFAE 292

Query: 975  LLYFLRFRFLSTGCRYDNKLLAHHGVDILEDLVITLADGITTNYLELISVDSNMSSDMNR 796
            LL FLRF  L  GC YD+ L   HGV ILEDLVITLADGI++ YLELISVD N+S++MN 
Sbjct: 293  LLCFLRFGSLREGCCYDHSLFTLHGVVILEDLVITLADGISSVYLELISVDGNVSNEMNS 352

Query: 795  MGLNLCSLSTRALQKLRNEMALKQWLHQNMDSVVSMYEDRFDLYSFQIQLTKEADKSRQD 616
            +G  LC+LSTRALQ+LRNE+ALKQWL+QNM++VVSMYED FDL + Q QL +E  KS+ +
Sbjct: 353  LGWRLCTLSTRALQRLRNEVALKQWLYQNMEAVVSMYEDCFDLCTLQSQLIEEPSKSQAE 412

Query: 615  XXXXXXXXXXXXXXPVVKPLQFMVISPLSMPVKRTRELRALNGWRYYFSLFLEFSDITMP 436
                           +  P Q +VIS  SMPVKRT+ELRAL GWRYYFSLFLE SDITMP
Sbjct: 413  NFSWWKKLTVRQSGSLSTPSQCVVISHFSMPVKRTKELRALTGWRYYFSLFLELSDITMP 472

Query: 435  LVRVIFSKICSAISFFLVCLVGRSLGLIYSGIRQSLGW 322
            L+R IF+K+  A+SFFLVCL+GRSLGLIY+GIRQSL W
Sbjct: 473  LIRAIFTKVSDAVSFFLVCLIGRSLGLIYTGIRQSLRW 510


>ref|XP_002265267.1| PREDICTED: uncharacterized protein LOC100244728 [Vitis vinifera]
          Length = 508

 Score =  317 bits (813), Expect = 3e-84
 Identities = 164/278 (58%), Positives = 207/278 (74%)
 Frame = -1

Query: 1155 SEVLQISSQSVFVTWLEEELNLECKKHDKNILLMMLQKLKQDDNITKNIKRSGKDELYAD 976
            SE++Q   Q + + WLE+E   E +K DK +  +M +KL+ D +I + I+ SGK++L+A+
Sbjct: 231  SEIIQKLCQPICMAWLEKECT-ENRKADKALHTLMFEKLEGDTSILQKIRNSGKEDLFAE 289

Query: 975  LLYFLRFRFLSTGCRYDNKLLAHHGVDILEDLVITLADGITTNYLELISVDSNMSSDMNR 796
            LL FLRF  L  GC YD+ L   HGV ILEDLVITLADGI++ YLELISVD N+S++MN 
Sbjct: 290  LLCFLRFGSLREGCCYDHSLFTLHGVVILEDLVITLADGISSVYLELISVDGNVSNEMNS 349

Query: 795  MGLNLCSLSTRALQKLRNEMALKQWLHQNMDSVVSMYEDRFDLYSFQIQLTKEADKSRQD 616
            +G  LC+LSTRALQ+LRNE+ALKQWL+QNM++VVSMYED FDL + Q QL +E  KS+ +
Sbjct: 350  LGWRLCTLSTRALQRLRNEVALKQWLYQNMEAVVSMYEDCFDLCTLQSQLIEEPSKSQAE 409

Query: 615  XXXXXXXXXXXXXXPVVKPLQFMVISPLSMPVKRTRELRALNGWRYYFSLFLEFSDITMP 436
                           +  P Q +VIS  SMPVKRT+ELRAL GWRYYFSLFLE SDITMP
Sbjct: 410  NFSWWKKLTVRQSGSLSTPSQCVVISHFSMPVKRTKELRALTGWRYYFSLFLELSDITMP 469

Query: 435  LVRVIFSKICSAISFFLVCLVGRSLGLIYSGIRQSLGW 322
            L+R IF+K+  A+SFFLVCL+GRSLGLIY+GIRQSL W
Sbjct: 470  LIRAIFTKVSDAVSFFLVCLIGRSLGLIYTGIRQSLRW 507


>ref|XP_002521109.1| conserved hypothetical protein [Ricinus communis]
            gi|223539678|gb|EEF41260.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 517

 Score =  314 bits (805), Expect = 2e-83
 Identities = 158/278 (56%), Positives = 207/278 (74%)
 Frame = -1

Query: 1152 EVLQISSQSVFVTWLEEELNLECKKHDKNILLMMLQKLKQDDNITKNIKRSGKDELYADL 973
            ++++ S   V ++WL EEL LE KK D+ I+ +M+QKLK D+ I +NI++SGK++LYA+L
Sbjct: 241  DIIRKSCNHVSISWLLEELRLENKKQDEAIVSLMIQKLKGDETILQNIRKSGKEDLYAEL 300

Query: 972  LYFLRFRFLSTGCRYDNKLLAHHGVDILEDLVITLADGITTNYLELISVDSNMSSDMNRM 793
            LYFLRF  L   C YD  L + HG  ILEDLVI LADG+ + YLELISVD N+S++M+ +
Sbjct: 301  LYFLRFGSLRKNCCYDQSLFSAHGDSILEDLVIALADGVASVYLELISVDGNLSNEMSDL 360

Query: 792  GLNLCSLSTRALQKLRNEMALKQWLHQNMDSVVSMYEDRFDLYSFQIQLTKEADKSRQDX 613
            G+ +C+LSTRALQ+LRNE++L QWL+QN+++VVSMYEDRFDL + Q ++ KE  +S Q  
Sbjct: 361  GMIMCNLSTRALQRLRNEVSLNQWLYQNLEAVVSMYEDRFDLCTLQSKVAKEPSQS-QTE 419

Query: 612  XXXXXXXXXXXXXPVVKPLQFMVISPLSMPVKRTRELRALNGWRYYFSLFLEFSDITMPL 433
                           +  L ++VIS  SMPVKRTRELRAL GWRYYFSL+LE  DITMPL
Sbjct: 420  NSGWWQKLTRRQSGTLPSLSYVVISQFSMPVKRTRELRALTGWRYYFSLYLELFDITMPL 479

Query: 432  VRVIFSKICSAISFFLVCLVGRSLGLIYSGIRQSLGWR 319
            +R +  K+ SAISFFLV L+GRSLGLIY+GIRQSL W+
Sbjct: 480  IRAVIEKVSSAISFFLVTLIGRSLGLIYTGIRQSLRWK 517


>ref|XP_002301777.1| predicted protein [Populus trichocarpa] gi|222843503|gb|EEE81050.1|
            predicted protein [Populus trichocarpa]
          Length = 472

 Score =  304 bits (779), Expect = 2e-80
 Identities = 155/278 (55%), Positives = 205/278 (73%)
 Frame = -1

Query: 1152 EVLQISSQSVFVTWLEEELNLECKKHDKNILLMMLQKLKQDDNITKNIKRSGKDELYADL 973
            E++Q S   V + WL EEL LE KK DK ++ +M++KLK DD + +NI++SGK++LYA+L
Sbjct: 196  EIIQKSCHPVCMAWLVEELQLENKKSDKELVSLMIEKLKGDDIVLQNIRKSGKEDLYAEL 255

Query: 972  LYFLRFRFLSTGCRYDNKLLAHHGVDILEDLVITLADGITTNYLELISVDSNMSSDMNRM 793
            LYFLRF  L   C YD +L   HG  ILEDLVITLADGI + YLE+ISVD ++S++MN +
Sbjct: 256  LYFLRFGSLRKSCCYDCRLFILHGDSILEDLVITLADGIASVYLEIISVDGSLSNEMNSL 315

Query: 792  GLNLCSLSTRALQKLRNEMALKQWLHQNMDSVVSMYEDRFDLYSFQIQLTKEADKSRQDX 613
             + +C++STRALQ+LRNE+AL QWL+QN+++VVSMYEDRFDL + Q++  +E  ++ Q  
Sbjct: 316  DMFMCNMSTRALQRLRNEVALNQWLYQNVEAVVSMYEDRFDLCTLQLKFIEEPCEN-QIE 374

Query: 612  XXXXXXXXXXXXXPVVKPLQFMVISPLSMPVKRTRELRALNGWRYYFSLFLEFSDITMPL 433
                          +++   F  IS  SMPVKRT+ELRAL GWRYYFSL+LE SDI MPL
Sbjct: 375  KHPWWKKLTLRKSIMMQSSCFSAISHFSMPVKRTKELRALTGWRYYFSLYLELSDIMMPL 434

Query: 432  VRVIFSKICSAISFFLVCLVGRSLGLIYSGIRQSLGWR 319
            VR +  K+ +AISFFLV L+GRSLGLIY+GIRQSL W+
Sbjct: 435  VRAVIDKVSNAISFFLVTLIGRSLGLIYTGIRQSLRWK 472


>ref|XP_003551433.1| PREDICTED: uncharacterized protein LOC100802527 [Glycine max]
          Length = 514

 Score =  288 bits (737), Expect = 2e-75
 Identities = 149/282 (52%), Positives = 193/282 (68%)
 Frame = -1

Query: 1164 GTSSEVLQISSQSVFVTWLEEELNLECKKHDKNILLMMLQKLKQDDNITKNIKRSGKDEL 985
            G  S+++Q S  S    WLE+E  L     DK +  M+L K+K D  I ++I RSGK +L
Sbjct: 233  GMFSDIIQRSCHSTCTAWLEKEFFLLKGNADKELASMILVKVKGDITIVQSITRSGKKDL 292

Query: 984  YADLLYFLRFRFLSTGCRYDNKLLAHHGVDILEDLVITLADGITTNYLELISVDSNMSSD 805
            YA+LL++L F  L  GC YD+++ + HG+ ILEDLVI+LADG+ + YLE ISVD+++SS 
Sbjct: 293  YAELLWYLTFGSLREGCYYDSRIFSVHGISILEDLVISLADGVASVYLEFISVDNDVSSK 352

Query: 804  MNRMGLNLCSLSTRALQKLRNEMALKQWLHQNMDSVVSMYEDRFDLYSFQIQLTKEADKS 625
             + + + LC+LSTR LQKLRNE+AL QWL+ NMD+VVSMYEDRFDL+  + Q     D  
Sbjct: 353  TSSLDMPLCALSTRELQKLRNEVALNQWLYHNMDTVVSMYEDRFDLFILESQPVDVTDSI 412

Query: 624  RQDXXXXXXXXXXXXXXPVVKPLQFMVISPLSMPVKRTRELRALNGWRYYFSLFLEFSDI 445
            + +               +   L  + IS  SMPVKRT+ELRAL GWRYYFSLFLE SDI
Sbjct: 413  QTEEQNWWKRLTQQNSKAMSPELHCIDISHFSMPVKRTKELRALTGWRYYFSLFLELSDI 472

Query: 444  TMPLVRVIFSKICSAISFFLVCLVGRSLGLIYSGIRQSLGWR 319
            TMPL+R +  K+  AISFFLV L+GRSLGLIY+GIRQSL W+
Sbjct: 473  TMPLIRAVIDKVSDAISFFLVSLIGRSLGLIYTGIRQSLRWK 514


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