BLASTX nr result

ID: Coptis24_contig00020032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020032
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15262.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 ...   125   4e-27
ref|XP_003617649.1| Nuclear ribonuclease Z [Medicago truncatula]...   124   8e-27
gb|AFK49299.1| unknown [Medicago truncatula]                          121   5e-26
ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glyc...   117   1e-24

>emb|CBI15262.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +1

Query: 1   AKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAA 180
           A++LI+ESTFVDN  TVEHAR+YGHTHLSEIV +ADR  NKAILLIHFSARY  DEI+ A
Sbjct: 252 ARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILLIHFSARYTTDEIQEA 311

Query: 181 VSALPPNLAGRVFALTEG 234
           VSALPP L GRVFALTEG
Sbjct: 312 VSALPPPLGGRVFALTEG 329


>ref|XP_002273058.1| PREDICTED: nuclear ribonuclease Z isoform 1 [Vitis vinifera]
          Length = 290

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/78 (79%), Positives = 68/78 (87%)
 Frame = +1

Query: 1   AKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAA 180
           A++LI+ESTFVDN  TVEHAR+YGHTHLSEIV +ADR  NKAILLIHFSARY  DEI+ A
Sbjct: 212 ARVLIMESTFVDNTVTVEHAREYGHTHLSEIVSYADRFQNKAILLIHFSARYTTDEIQEA 271

Query: 181 VSALPPNLAGRVFALTEG 234
           VSALPP L GRVFALTEG
Sbjct: 272 VSALPPPLGGRVFALTEG 289


>ref|XP_003617649.1| Nuclear ribonuclease Z [Medicago truncatula]
           gi|355518984|gb|AET00608.1| Nuclear ribonuclease Z
           [Medicago truncatula]
          Length = 412

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   AKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAA 180
           AK+L++ESTFV+N  TVEHARDYGHTHLSEI+ +AD+L NKAILLIHFSARY  +EI+ A
Sbjct: 334 AKVLVLESTFVNNEMTVEHARDYGHTHLSEIISYADKLQNKAILLIHFSARYTVEEIQQA 393

Query: 181 VSALPPNLAGRVFALTEG 234
           VSALPP LAGR FALTEG
Sbjct: 394 VSALPPPLAGRTFALTEG 411


>gb|AFK49299.1| unknown [Medicago truncatula]
          Length = 335

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/78 (75%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   AKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAA 180
           AK+L++ESTFV+N  TVEHARDYGHTHL EI+ +ADRL NKAILLIHFSARY  +EI+ A
Sbjct: 257 AKVLVLESTFVNNEMTVEHARDYGHTHLFEIISYADRLQNKAILLIHFSARYTVEEIQQA 316

Query: 181 VSALPPNLAGRVFALTEG 234
           V ALPP LAGR FALTEG
Sbjct: 317 VGALPPPLAGRTFALTEG 334


>ref|XP_003555802.1| PREDICTED: nuclear ribonuclease Z-like [Glycine max]
          Length = 279

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/78 (71%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   AKILIVESTFVDNAKTVEHARDYGHTHLSEIVGHADRLCNKAILLIHFSARYEADEIRAA 180
           A+IL++E TFV+N+ TVEHARDYGHTHLSEI+ +A+ L N+AILLIHFSARY  +EI+ A
Sbjct: 201 ARILVLECTFVNNSITVEHARDYGHTHLSEIISYAESLQNRAILLIHFSARYTVEEIQHA 260

Query: 181 VSALPPNLAGRVFALTEG 234
           VSALPP+L+GR FALTEG
Sbjct: 261 VSALPPSLSGRTFALTEG 278


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