BLASTX nr result

ID: Coptis24_contig00020028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020028
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267988.1| PREDICTED: uncharacterized protein LOC100255...   147   7e-34
ref|XP_004168837.1| PREDICTED: uncharacterized LOC101208049 [Cuc...   147   9e-34
ref|XP_004135215.1| PREDICTED: uncharacterized protein LOC101208...   147   9e-34
ref|XP_002520192.1| conserved hypothetical protein [Ricinus comm...   142   4e-32
dbj|BAD44313.1| hypothetical protein [Arabidopsis thaliana] gi|5...   141   5e-32

>ref|XP_002267988.1| PREDICTED: uncharacterized protein LOC100255235 [Vitis vinifera]
           gi|296086476|emb|CBI32065.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/98 (75%), Positives = 84/98 (85%)
 Frame = -1

Query: 294 PTLHTSIPLSIKADFQKSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGGFSLLAVLFNRT 115
           PT    +  S K+  Q  Y+GPKP+++W+ADWV+ NDDTVRSLPIYVGG SLL+VLFNRT
Sbjct: 22  PTFPRFVRASSKS--QGRYRGPKPRRDWLADWVSNNDDTVRSLPIYVGGVSLLSVLFNRT 79

Query: 114 VSGIAPVADASSSQSRADLLTLGLAVTNILTGLVWLSI 1
           +SGIAPVADASSSQSRADLLTLGLAVTNIL GLVWLSI
Sbjct: 80  ISGIAPVADASSSQSRADLLTLGLAVTNILAGLVWLSI 117


>ref|XP_004168837.1| PREDICTED: uncharacterized LOC101208049 [Cucumis sativus]
          Length = 300

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/102 (73%), Positives = 83/102 (81%), Gaps = 3/102 (2%)
 Frame = -1

Query: 297 HPTLHTSIPLSIKADF---QKSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGGFSLLAVL 127
           H +L  S PL ++A     Q+SY+GPKP    +ADWV+ NDDTVRSLPIYVGG SLL VL
Sbjct: 22  HSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSNNDDTVRSLPIYVGGISLLIVL 81

Query: 126 FNRTVSGIAPVADASSSQSRADLLTLGLAVTNILTGLVWLSI 1
           FNR VSGIAPVADASSSQSRADLLTLGLAVTN+L GLVWLSI
Sbjct: 82  FNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVWLSI 123


>ref|XP_004135215.1| PREDICTED: uncharacterized protein LOC101208049 [Cucumis sativus]
          Length = 300

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/102 (73%), Positives = 83/102 (81%), Gaps = 3/102 (2%)
 Frame = -1

Query: 297 HPTLHTSIPLSIKADF---QKSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGGFSLLAVL 127
           H +L  S PL ++A     Q+SY+GPKP    +ADWV+ NDDTVRSLPIYVGG SLL VL
Sbjct: 22  HSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSNNDDTVRSLPIYVGGISLLIVL 81

Query: 126 FNRTVSGIAPVADASSSQSRADLLTLGLAVTNILTGLVWLSI 1
           FNR VSGIAPVADASSSQSRADLLTLGLAVTN+L GLVWLSI
Sbjct: 82  FNRAVSGIAPVADASSSQSRADLLTLGLAVTNVLAGLVWLSI 123


>ref|XP_002520192.1| conserved hypothetical protein [Ricinus communis]
           gi|223540684|gb|EEF42247.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score =  142 bits (357), Expect = 4e-32
 Identities = 76/116 (65%), Positives = 85/116 (73%), Gaps = 7/116 (6%)
 Frame = -1

Query: 327 PLSLKKRHYFH-------PTLHTSIPLSIKADFQKSYKGPKPKKEWIADWVTKNDDTVRS 169
           P S+  R  FH         L   +  S   + Q  Y+GPKPK++ +ADWV+ NDDTVRS
Sbjct: 48  PTSILFRSPFHFPISRPLQNLRFFVRASSDLNSQGKYRGPKPKRDLVADWVSNNDDTVRS 107

Query: 168 LPIYVGGFSLLAVLFNRTVSGIAPVADASSSQSRADLLTLGLAVTNILTGLVWLSI 1
           LPIYVGG SLLAVLFNR  SGIAPVADASSSQSRADLLTLGLAVTNIL GL+WLSI
Sbjct: 108 LPIYVGGASLLAVLFNRAASGIAPVADASSSQSRADLLTLGLAVTNILAGLIWLSI 163


>dbj|BAD44313.1| hypothetical protein [Arabidopsis thaliana]
           gi|51971329|dbj|BAD44329.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 242

 Score =  141 bits (356), Expect = 5e-32
 Identities = 76/109 (69%), Positives = 86/109 (78%), Gaps = 6/109 (5%)
 Frame = -1

Query: 309 RHYFHPTLHTSIPLSIKADFQ------KSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGG 148
           R + HP L    P  I+A         K+Y+GPKP+K  +AD+++KNDD VRSLPIYVGG
Sbjct: 18  RQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADFISKNDDLVRSLPIYVGG 75

Query: 147 FSLLAVLFNRTVSGIAPVADASSSQSRADLLTLGLAVTNILTGLVWLSI 1
            SLLAVLFNRTVSGIAPVADASSSQSRADLL LGLAVTN+LTGLVWLSI
Sbjct: 76  ASLLAVLFNRTVSGIAPVADASSSQSRADLLALGLAVTNLLTGLVWLSI 124


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