BLASTX nr result

ID: Coptis24_contig00020020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020020
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    88   8e-16
gb|ACX85638.1| putative transposase [Cucumis melo]                     82   5e-14
ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002334116.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002331234.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
 Frame = +2

Query: 2   FHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQTLS 181
           F K++ CDP  PRA CNYC + YAC  K + TSNM +H+             D  Q+TLS
Sbjct: 42  FTKVKECDPNYPRATCNYCGIDYACHDKRNETSNMKAHL-ASGCQKHPFRCKDPKQKTLS 100

Query: 182 FKDKE------------LVAISFSIKACRDALSRMIIVDELPFSFVEGE 292
           F+ K             L+A SF+++ CR  L+RMIIVDEL F FV+GE
Sbjct: 101 FQSKNKEGEGEGDSGYTLLATSFNVEHCRKMLARMIIVDELAFRFVQGE 149


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/97 (42%), Positives = 57/97 (58%)
 Frame = +2

Query: 2   FHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQTLS 181
           F K+EGCDPK PRA C +C  SYAC SK +GT+N+  H+             + + +   
Sbjct: 35  FIKVEGCDPKYPRAACKHCGASYACDSKRNGTTNLKRHL---EKCKMYVNPLEDNVEGEG 91

Query: 182 FKDKELVAISFSIKACRDALSRMIIVDELPFSFVEGE 292
             +  L+  SF+ + CR  L+RM+I+DELPF FVE E
Sbjct: 92  DSESNLMTASFTQENCRKMLARMVILDELPFKFVESE 128


>ref|XP_002336966.1| predicted protein [Populus trichocarpa] gi|222837471|gb|EEE75850.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
 Frame = +2

Query: 23  DPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQTLSFKDK--- 193
           DPK PRA+CNYC   YAC +  +GTSNM SH+             DK Q+ L  + K   
Sbjct: 72  DPKAPRAECNYCGKHYACHTIVNGTSNMWSHL---KVCKKFPFVVDKKQKVLVLESKIEN 128

Query: 194 ---------ELVAISFSIKACRDALSRMIIVDELPFSFVEG 289
                     L AI ++   CR  L++M+I+DELPF+FVEG
Sbjct: 129 GELGEQNVGSLKAIGYNYDECRQTLAKMVIIDELPFNFVEG 169


>ref|XP_002334116.1| predicted protein [Populus trichocarpa] gi|222869650|gb|EEF06781.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 12/109 (11%)
 Frame = +2

Query: 2   FHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQTLS 181
           F K++G DP  PRA+CNYC   YAC +  +GTSNM SH+             DK Q+ L 
Sbjct: 68  FTKLDG-DPTTPRAECNYCGKDYACHTIINGTSNMWSHL---KVCKKFPFVVDKKQKILV 123

Query: 182 FKDKE------------LVAISFSIKACRDALSRMIIVDELPFSFVEGE 292
            +  +            L AI +    CR AL +M+I+DELPF+FVEG+
Sbjct: 124 LEPNKVGGELGDRSVGTLKAIGYDYDECRKALVKMVIIDELPFNFVEGK 172


>ref|XP_002331234.1| predicted protein [Populus trichocarpa] gi|222873420|gb|EEF10551.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
 Frame = +2

Query: 2   FHKMEGCDPKNPRAKCNYCPVSYACASKGSGTSNMLSHMXXXXXXXXXXXXADKSQQTLS 181
           F K++G DP  PR +CNYC   YAC +  +GTSN+ SH+             DK Q  L 
Sbjct: 66  FTKLDG-DPTTPRVECNYCGKDYACHTIINGTSNVWSHL---KVCKKFPFVVDKKQNILV 121

Query: 182 FKDKE------------LVAISFSIKACRDALSRMIIVDELPFSFVEGE 292
            +  +            L  I +    CR  L +M+I+DELPF+FVEG+
Sbjct: 122 LEPNKVWGELGDRSVGTLKVIGYDYDECRKILVKMVIIDELPFNFVEGK 170


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