BLASTX nr result

ID: Coptis24_contig00020013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020013
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512201.1| lipid binding protein, putative [Ricinus com...   160   2e-37
ref|XP_002270671.1| PREDICTED: uncharacterized GPI-anchored prot...   160   4e-37
emb|CAN59826.1| hypothetical protein VITISV_016657 [Vitis vinifera]   160   4e-37
ref|XP_002330863.1| predicted protein [Populus trichocarpa] gi|2...   156   5e-36
ref|XP_004158216.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   150   2e-34

>ref|XP_002512201.1| lipid binding protein, putative [Ricinus communis]
           gi|223548745|gb|EEF50235.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 133

 Score =  160 bits (406), Expect = 2e-37
 Identities = 70/112 (62%), Positives = 90/112 (80%)
 Frame = -2

Query: 675 YARCDDQKQREECSQQLIGLATCLDYVGGQAKAPTPDCCKGMKTVLAKSKKCLCLLVKNR 496
           +A  D  K +EEC++QL+GLATCL YVGG AK+PTPDCC G+K VL  +KKCLC+++K+R
Sbjct: 4   FAMADADKDKEECAEQLVGLATCLPYVGGNAKSPTPDCCTGLKEVLKNNKKCLCVVIKDR 63

Query: 495 NDPSLGLKVNATLALNLPSICKSDVSIADCPALLGLAPNSTDAQVFKQFERS 340
           NDP LGLK+N TLAL LP++C +  +++ CPALL LAPNS DAQVF QF +S
Sbjct: 64  NDPDLGLKINVTLALGLPTVCHATANVSQCPALLHLAPNSPDAQVFYQFTKS 115


>ref|XP_002270671.1| PREDICTED: uncharacterized GPI-anchored protein At1g27950 [Vitis
           vinifera] gi|297741205|emb|CBI32156.3| unnamed protein
           product [Vitis vinifera]
          Length = 188

 Score =  160 bits (404), Expect = 4e-37
 Identities = 70/108 (64%), Positives = 88/108 (81%)
 Frame = -2

Query: 663 DDQKQREECSQQLIGLATCLDYVGGQAKAPTPDCCKGMKTVLAKSKKCLCLLVKNRNDPS 484
           D  K ++EC++QL+G+ATCL YVGG AKAPTPDCC G+K VL K+KKCLC+++K+RNDP 
Sbjct: 23  DSAKDKQECTEQLVGMATCLPYVGGDAKAPTPDCCSGLKQVLQKNKKCLCVIIKDRNDPD 82

Query: 483 LGLKVNATLALNLPSICKSDVSIADCPALLGLAPNSTDAQVFKQFERS 340
           LGL +NATLAL LPS+C +  +++ CPALL LAPNS DAQVF QF  S
Sbjct: 83  LGLNLNATLALGLPSVCHAPANVSQCPALLHLAPNSPDAQVFYQFANS 130


>emb|CAN59826.1| hypothetical protein VITISV_016657 [Vitis vinifera]
          Length = 595

 Score =  160 bits (404), Expect = 4e-37
 Identities = 70/108 (64%), Positives = 88/108 (81%)
 Frame = -2

Query: 663 DDQKQREECSQQLIGLATCLDYVGGQAKAPTPDCCKGMKTVLAKSKKCLCLLVKNRNDPS 484
           D  K ++EC++QL+G+ATCL YVGG AKAPTPDCC G+K VL K+KKCLC+++K+RNDP 
Sbjct: 23  DSAKDKQECTEQLVGMATCLPYVGGDAKAPTPDCCSGLKQVLQKNKKCLCVIIKDRNDPD 82

Query: 483 LGLKVNATLALNLPSICKSDVSIADCPALLGLAPNSTDAQVFKQFERS 340
           LGL +NATLAL LPS+C +  +++ CPALL LAPNS DAQVF QF  S
Sbjct: 83  LGLNLNATLALGLPSVCHAPANVSQCPALLHLAPNSPDAQVFYQFANS 130


>ref|XP_002330863.1| predicted protein [Populus trichocarpa] gi|222872685|gb|EEF09816.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  156 bits (394), Expect = 5e-36
 Identities = 69/111 (62%), Positives = 86/111 (77%)
 Frame = -2

Query: 672 ARCDDQKQREECSQQLIGLATCLDYVGGQAKAPTPDCCKGMKTVLAKSKKCLCLLVKNRN 493
           A     K  EEC++QL+GLATCL YVGG AKAPTPDCC G+K VL  +KKCLC+++K+RN
Sbjct: 27  AMAGKDKDSEECAEQLVGLATCLPYVGGDAKAPTPDCCNGLKQVLKDNKKCLCVIIKDRN 86

Query: 492 DPSLGLKVNATLALNLPSICKSDVSIADCPALLGLAPNSTDAQVFKQFERS 340
           DP LGLK+NATLAL+LPS+C +  +++ CPALL L PNS DAQ+F Q   S
Sbjct: 87  DPELGLKINATLALSLPSVCHAPANVSQCPALLNLPPNSPDAQIFYQLANS 137


>ref|XP_004158216.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized GPI-anchored
           protein At1g27950-like [Cucumis sativus]
          Length = 186

 Score =  150 bits (380), Expect = 2e-34
 Identities = 66/106 (62%), Positives = 84/106 (79%)
 Frame = -2

Query: 663 DDQKQREECSQQLIGLATCLDYVGGQAKAPTPDCCKGMKTVLAKSKKCLCLLVKNRNDPS 484
           DD+K REEC+ QL G+ATCL YV G AKAPTPDCC G+K VL   KKCLC++V++RNDP 
Sbjct: 21  DDKKDREECTPQLAGMATCLPYVSGDAKAPTPDCCSGLKEVLKNDKKCLCVIVRDRNDPD 80

Query: 483 LGLKVNATLALNLPSICKSDVSIADCPALLGLAPNSTDAQVFKQFE 346
           LGL++N TLAL+LP IC +  ++++CPALL +  NS+DAQVF Q E
Sbjct: 81  LGLQINVTLALSLPDICHATANVSNCPALLNMPSNSSDAQVFYQLE 126


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