BLASTX nr result

ID: Coptis24_contig00020012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020012
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus...   345   1e-92
ref|XP_003518977.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   338   1e-90
gb|AAK29646.1|AF349916_1 putative short-chain type alcohol dehyd...   332   1e-88
gb|AFK48641.1| unknown [Medicago truncatula]                          331   2e-88
gb|AAN32641.1|AF416732_1 putative short-chain type alcohol dehyd...   330   3e-88

>ref|XP_002517315.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
            gi|223543578|gb|EEF45108.1| 2,4-dienoyl-CoA reductase,
            putative [Ricinus communis]
          Length = 285

 Score =  345 bits (885), Expect = 1e-92
 Identities = 180/279 (64%), Positives = 214/279 (76%), Gaps = 2/279 (0%)
 Frame = -3

Query: 1040 SMAEKFLEPWKRLDGKVVMITGASSGLGREFCLNLAQAGCKIIAAARRVDRLESLCAEIN 861
            S  +  LEPW  LD KVV++TGAS+GLGREFCL+LA+AGCKI+AAARR+DRL+SLC EIN
Sbjct: 7    SQVQTQLEPWCDLDNKVVLVTGASAGLGREFCLDLAKAGCKILAAARRIDRLKSLCDEIN 66

Query: 860  RMESCKGV--RAVGIQLDVNAKGEVIEGCVEKAWNAFGWIDALVNNAGVRGSVRSPLDXX 687
            ++ +  G   RAV I+LDV A G  I+  V+ AW+AFG IDALVNNAGVRG+V++PLD  
Sbjct: 67   QLPNTPGAGPRAVAIELDVCADGPTIDKSVQIAWDAFGRIDALVNNAGVRGNVKTPLDLS 126

Query: 686  XXXXXXXXXXXXXXXXLVSKYVCKRMRAXXXXXXXXXXXXXXGLNRGHLPGGVAYATSKA 507
                            +VSKYVC RMR               GLNRG LPG VAYA+SKA
Sbjct: 127  EEEWELVVKTNLKGSWIVSKYVCIRMRDAKLGGSIVNISSIAGLNRGQLPGAVAYASSKA 186

Query: 506  GLNVMTMVMALELGMYKIRVNAISPGLFRSEITEALMEKKWLNNVALRTIPLRQHGTADP 327
            GLN +T VMALELG++ IRVN+ISPGLF+SEITE LM+K WL N+ALRT+PLR++GT+DP
Sbjct: 187  GLNALTKVMALELGVHNIRVNSISPGLFKSEITEGLMQKDWLRNIALRTVPLREYGTSDP 246

Query: 326  ALTSLVRYLIHDSSEYVSGNIFIVDSGATLPGVPIFSSL 210
            ALTSLVRYLIHDSSEYVSGNIF+VD+GATLPGVPIFSSL
Sbjct: 247  ALTSLVRYLIHDSSEYVSGNIFVVDAGATLPGVPIFSSL 285


>ref|XP_003518977.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like
            [Glycine max]
          Length = 282

 Score =  338 bits (868), Expect = 1e-90
 Identities = 175/274 (63%), Positives = 208/274 (75%), Gaps = 3/274 (1%)
 Frame = -3

Query: 1022 LEPWKRLDGKVVMITGASSGLGREFCLNLAQAGCKIIAAARRVDRLESLCAEINRMESCK 843
            LEPW  L GKVVM+TGASSGLGR+FCL+L +AGC+++ AARRVDRLESLC EIN M +  
Sbjct: 9    LEPWHTLAGKVVMVTGASSGLGRDFCLDLGRAGCRVVVAARRVDRLESLCDEINSMAAGD 68

Query: 842  GVR---AVGIQLDVNAKGEVIEGCVEKAWNAFGWIDALVNNAGVRGSVRSPLDXXXXXXX 672
            G R   AV ++LDV A    ++  V+KAW AFG IDAL+NNAGVRG+V+SPL+       
Sbjct: 69   GGRSRRAVAVELDVAADDPAVDKYVQKAWEAFGHIDALINNAGVRGNVKSPLELSEEEWN 128

Query: 671  XXXXXXXXXXXLVSKYVCKRMRAXXXXXXXXXXXXXXGLNRGHLPGGVAYATSKAGLNVM 492
                       LVSKYVCKRMR               GLNRG LPGG AY++SKAG+N++
Sbjct: 129  HAFRTNLTGTWLVSKYVCKRMRDAQRKGSIINIASIAGLNRGQLPGGAAYSSSKAGVNML 188

Query: 491  TMVMALELGMYKIRVNAISPGLFRSEITEALMEKKWLNNVALRTIPLRQHGTADPALTSL 312
            T VMALELG +KIRVN+ISPGLF+SEITE LMEK WLNNVA++T+PLR+ GT+DPALTSL
Sbjct: 189  TRVMALELGAHKIRVNSISPGLFKSEITEKLMEKNWLNNVAMKTVPLRKFGTSDPALTSL 248

Query: 311  VRYLIHDSSEYVSGNIFIVDSGATLPGVPIFSSL 210
             RYLIHDSSEYVSGN F+VD+GATLPGVPI+SSL
Sbjct: 249  ARYLIHDSSEYVSGNNFVVDAGATLPGVPIYSSL 282


>gb|AAK29646.1|AF349916_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]
          Length = 283

 Score =  332 bits (850), Expect = 1e-88
 Identities = 173/273 (63%), Positives = 205/273 (75%), Gaps = 2/273 (0%)
 Frame = -3

Query: 1022 LEPWKRLDGKVVMITGASSGLGREFCLNLAQAGCKIIAAARRVDRLESLCAEINR--MES 849
            LEPW  L GKVVM+TGASSG+GR+FC +L++AGC+IIAAARR+DRL+SLC EIN     S
Sbjct: 11   LEPWGELAGKVVMVTGASSGIGRDFCSDLSKAGCRIIAAARRIDRLQSLCDEINSNSSNS 70

Query: 848  CKGVRAVGIQLDVNAKGEVIEGCVEKAWNAFGWIDALVNNAGVRGSVRSPLDXXXXXXXX 669
             + +RAV I+LDV+A G  IE  V+KAW+ FG ID LVNNAG+RGSV SPLD        
Sbjct: 71   SQDLRAVAIELDVSANGSAIEAAVQKAWDVFGRIDGLVNNAGIRGSVHSPLDLSEEEWEK 130

Query: 668  XXXXXXXXXXLVSKYVCKRMRAXXXXXXXXXXXXXXGLNRGHLPGGVAYATSKAGLNVMT 489
                      LV+K+VCK MRA              GLN G LPG +AYA+SK  LN +T
Sbjct: 131  TYKTNLRGAWLVTKFVCKHMRAANQEGSVINISSIAGLNPGQLPGCLAYASSKEALNSIT 190

Query: 488  MVMALELGMYKIRVNAISPGLFRSEITEALMEKKWLNNVALRTIPLRQHGTADPALTSLV 309
             V+ALELG YKIRVN+ISPGLF+SEITE L++K WL N+ LRTIPLR HGT++PALTS+V
Sbjct: 191  KVLALELGPYKIRVNSISPGLFKSEITEGLIQKDWLQNIELRTIPLRTHGTSNPALTSVV 250

Query: 308  RYLIHDSSEYVSGNIFIVDSGATLPGVPIFSSL 210
            RYLIHDSSEYVSGN+FIVD+GATLPGVPIFSSL
Sbjct: 251  RYLIHDSSEYVSGNMFIVDAGATLPGVPIFSSL 283


>gb|AFK48641.1| unknown [Medicago truncatula]
          Length = 273

 Score =  331 bits (849), Expect = 2e-88
 Identities = 173/273 (63%), Positives = 206/273 (75%)
 Frame = -3

Query: 1028 KFLEPWKRLDGKVVMITGASSGLGREFCLNLAQAGCKIIAAARRVDRLESLCAEINRMES 849
            K LEPW  L GKVV++TGAS+G+GR+FCL+LA+AGC +IAAARRVDRL+SLC EIN  + 
Sbjct: 3    KQLEPWHHLAGKVVLVTGASAGIGRDFCLDLARAGCFVIAAARRVDRLQSLCDEINGKDG 62

Query: 848  CKGVRAVGIQLDVNAKGEVIEGCVEKAWNAFGWIDALVNNAGVRGSVRSPLDXXXXXXXX 669
               +RAV ++LDV A G  IE  V+KAW AFG IDAL+NNAGVRG+V SPL+        
Sbjct: 63   --RLRAVAVELDVAADGGAIEKYVQKAWEAFGHIDALINNAGVRGNVSSPLELTEEEWNN 120

Query: 668  XXXXXXXXXXLVSKYVCKRMRAXXXXXXXXXXXXXXGLNRGHLPGGVAYATSKAGLNVMT 489
                      LVSKYVCK MR               GL RG LPGG AYA SKAG+N++T
Sbjct: 121  VFKTNITGTWLVSKYVCKLMRDSKRKGSIINISSIAGLERGQLPGGTAYACSKAGVNMLT 180

Query: 488  MVMALELGMYKIRVNAISPGLFRSEITEALMEKKWLNNVALRTIPLRQHGTADPALTSLV 309
             VMALELG YKIRVN+ISPGLF+SEITE+LM+K WLNNVA+RT+PLR+ GT++PALTS+ 
Sbjct: 181  KVMALELGAYKIRVNSISPGLFKSEITESLMKKDWLNNVAIRTVPLREWGTSNPALTSIA 240

Query: 308  RYLIHDSSEYVSGNIFIVDSGATLPGVPIFSSL 210
            RYLIHDSSEYV+GNIFI D+GATLPG PI+SSL
Sbjct: 241  RYLIHDSSEYVTGNIFIADAGATLPGFPIYSSL 273


>gb|AAN32641.1|AF416732_1 putative short-chain type alcohol dehydrogenase [Solanum tuberosum]
          Length = 290

 Score =  330 bits (847), Expect = 3e-88
 Identities = 175/280 (62%), Positives = 208/280 (74%), Gaps = 9/280 (3%)
 Frame = -3

Query: 1022 LEPWKRLDGKVVMITGASSGLGREFCLNLAQAGCKIIAAARRVDRLESLCAEINRME--- 852
            LEPW  L GKVVM+TGASSG+GR+FC +L++AGC+IIAAARR+DRL+SLC EIN ++   
Sbjct: 11   LEPWGELAGKVVMVTGASSGIGRDFCSDLSKAGCRIIAAARRIDRLKSLCDEINGIKLEF 70

Query: 851  ------SCKGVRAVGIQLDVNAKGEVIEGCVEKAWNAFGWIDALVNNAGVRGSVRSPLDX 690
                  S + +RAV I+LDV+A G  IE  V+KAWNAFG ID LVNNAG+RGSV SPL+ 
Sbjct: 71   LIESTISSQELRAVAIELDVSANGASIEAAVQKAWNAFGRIDVLVNNAGIRGSVHSPLNL 130

Query: 689  XXXXXXXXXXXXXXXXXLVSKYVCKRMRAXXXXXXXXXXXXXXGLNRGHLPGGVAYATSK 510
                             LV+KYVC  MRA              GLNRG LPG +AYA+SK
Sbjct: 131  SEEEWEKIYNTNLRGAWLVTKYVCIHMRAANQGGTVINISSTAGLNRGKLPGSLAYASSK 190

Query: 509  AGLNVMTMVMALELGMYKIRVNAISPGLFRSEITEALMEKKWLNNVALRTIPLRQHGTAD 330
              LN +T VMA+ELG YKIRVN+ISPG+F+SEITE L++K W  NVAL+TIPLR HGT++
Sbjct: 191  DALNSITKVMAIELGPYKIRVNSISPGVFKSEITERLIQKDWFKNVALKTIPLRTHGTSN 250

Query: 329  PALTSLVRYLIHDSSEYVSGNIFIVDSGATLPGVPIFSSL 210
            PALTS+VRYLIHDSSEYVSGNIFIVD+GATLPGVPIFSSL
Sbjct: 251  PALTSVVRYLIHDSSEYVSGNIFIVDAGATLPGVPIFSSL 290


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