BLASTX nr result

ID: Coptis24_contig00020011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020011
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002330076.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
emb|CBI39615.3| unnamed protein product [Vitis vinifera]              120   2e-25
ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rho...   120   2e-25
emb|CAN64715.1| hypothetical protein VITISV_026716 [Vitis vinifera]   120   2e-25

>ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|222871500|gb|EEF08631.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/93 (68%), Positives = 75/93 (80%)
 Frame = -2

Query: 280 EEKDVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEE 101
           +E++  GVLLYYKY  +PDLN+L +FYNSNC SL LLGRVRL+ HGVNVTVGGKLS LE+
Sbjct: 17  QEQEQYGVLLYYKYTEIPDLNSLLSFYNSNCTSLSLLGRVRLSLHGVNVTVGGKLSSLEK 76

Query: 100 HIAAVKLINLFDGTDFKLASCQDFQSNDNIVKE 2
           HI AVK I+LF+GTDFKLASC  F  ND +  E
Sbjct: 77  HIEAVKAISLFEGTDFKLASCH-FPLNDKVAHE 108


>ref|XP_002330076.1| predicted protein [Populus trichocarpa] gi|222871501|gb|EEF08632.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/93 (68%), Positives = 75/93 (80%)
 Frame = -2

Query: 280 EEKDVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEE 101
           +E++  GVLLYYKY  +PDLN+L +FYNSNC SL LLGRVRL+ HGVNVTVGGKLS LE+
Sbjct: 13  KEQEQYGVLLYYKYTEIPDLNSLLSFYNSNCTSLSLLGRVRLSLHGVNVTVGGKLSSLEK 72

Query: 100 HIAAVKLINLFDGTDFKLASCQDFQSNDNIVKE 2
           HI AVK I+LF+GTDFKLASC  F  ND +  E
Sbjct: 73  HIEAVKAISLFEGTDFKLASCH-FPLNDKVAHE 104


>emb|CBI39615.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -2

Query: 271 DVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIA 92
           D  GV+LYYKY  +PD++ L +FY+SNC SL LLGRVRLAP GVNVT+GGKLS LE+HIA
Sbjct: 8   DQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIA 67

Query: 91  AVKLINLFDGTDFKLASCQDFQSNDNIVKE 2
           AVK  +LF+GTDFKLASC     ND + KE
Sbjct: 68  AVKSNSLFEGTDFKLASCH-HPLNDQVAKE 96


>ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rhodanese-like
           domain-containing protein 2-like [Vitis vinifera]
          Length = 611

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -2

Query: 271 DVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIA 92
           D  GV+LYYKY  +PD++ L +FY+SNC SL LLGRVRLAP GVNVT+GGKLS LE+HIA
Sbjct: 8   DQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIA 67

Query: 91  AVKLINLFDGTDFKLASCQDFQSNDNIVKE 2
           AVK  +LF+GTDFKLASC     ND + KE
Sbjct: 68  AVKSNSLFEGTDFKLASCH-HPLNDQVAKE 96


>emb|CAN64715.1| hypothetical protein VITISV_026716 [Vitis vinifera]
          Length = 634

 Score =  120 bits (300), Expect = 2e-25
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -2

Query: 271 DVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIA 92
           D  GV+LYYKY  +PD++ L +FY+SNC SL LLGRVRLAP GVNVT+GGKLS LE+HIA
Sbjct: 8   DQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIA 67

Query: 91  AVKLINLFDGTDFKLASCQDFQSNDNIVKE 2
           AVK  +LF+GTDFKLASC     ND + KE
Sbjct: 68  AVKSNSLFEGTDFKLASCH-HPLNDQVAKE 96


Top