BLASTX nr result

ID: Coptis24_contig00020005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00020005
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220...    79   3e-13
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11

>ref|XP_004151750.1| PREDICTED: uncharacterized protein LOC101220238, partial [Cucumis
           sativus]
          Length = 169

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
 Frame = -2

Query: 335 VPLWIKID-LPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
           VP+WIK+  +P +LWT  G+  V+S + +P+  D AT +R R++YAR+CV ++++   P 
Sbjct: 51  VPVWIKLGRIPLELWTDAGLVVVASAIGKPLSVDLATKERCRLSYARICVELNVDSTMPI 110

Query: 158 FIPVNLGEGNREDIGLDYDWIPDQCGACNIVGHSDENC 45
            I VNL  G    + + Y+W P +C  C+  GHS   C
Sbjct: 111 EITVNL-RGEEFIVPVTYEWKPRKCNLCHSFGHSQSTC 147


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -2

Query: 335 VPLWIKI-DLPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
           VP+W+++ ++P + WT  G+  V+S +  P+  D  T  R R++YARVCV +D +     
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 299

Query: 158 FIPVNLGEGNREDIGLDYDWIPDQCGACNIVGHSDENCRLN 36
              +    G    I  +Y+WIP +C  CN+ GH+   C  N
Sbjct: 300 EYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATN 340


>ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
 Frame = -2

Query: 335 VPLWIKI-DLPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
           +P+WI+I DLP  LWTK G+  V+S++ +P+  D+ T    R++YAR+CV VD +  F  
Sbjct: 34  IPVWIRIYDLPFPLWTKEGLSEVASMVGQPLSCDELTLGCKRLDYARLCVEVDASLPFVH 93

Query: 158 FIPVNLGEGNREDIGLDYDWIPDQCGACNIVGHS 57
              +      RE + ++Y+W P +C  C + GHS
Sbjct: 94  KFKLEFSTTIRE-VHVNYEWKPKRCERCPVFGHS 126



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
 Frame = -2

Query: 335 VPLWIKID-LPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
           +P+WI++  LP  LW+K+G+   +S+  +P+  D+ T   T ++YA VCV +D +  F  
Sbjct: 483 LPVWIRLHGLPFPLWSKSGLSLAASMAGKPLSCDEQTYNCTHLDYAIVCVEIDASLPFIH 542

Query: 158 FIPVNLGEGNRED----IGLDYDWIPDQCGACNIVGH 60
              +   E    D    I ++Y+W P +C  C + GH
Sbjct: 543 QFDM---ESKLSDELVLIRVEYEWRPPRCEKCCVFGH 576


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -2

Query: 335 VPLWIKI-DLPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
           VP+W+++ ++P + WT  G+  V+S +  P+  D  T  R R++YARVCV +D +     
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 299

Query: 158 FIPVNLGEGNREDIGLDYDWIPDQCGACNIVGHSDENCRLN 36
              +    G    I  +Y+WIP +C  CN+ GH+   C  N
Sbjct: 300 EYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATN 340


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -2

Query: 335 VPLWIKI-DLPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
           VP+W+++ ++P + WT  G+  V+S +  P+  D  T  R R++YARVCV +D +     
Sbjct: 240 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 299

Query: 158 FIPVNLGEGNREDIGLDYDWIPDQCGACNIVGHSDENCRLN 36
              +    G    I  +Y+WIP +C  CN+ GH+   C  N
Sbjct: 300 EYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATN 340



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -2

Query: 335  VPLWIKI-DLPKQLWTKNGIDFVSSLLREPICKDDATAKRTRINYARVCVVVDINFGFPS 159
            VP+W+++ ++P + WT  G+  V+S +  P+  D  T  R R++YARVCV +D +     
Sbjct: 1033 VPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVK 1092

Query: 158  FIPVNLGEGNREDIGLDYDWIPDQCGACNIVGHSDENCRLN 36
               +    G    I  +Y+WIP +C  CN+ GH+   C  N
Sbjct: 1093 EYDLRCPNGLFITISAEYEWIPSKCSNCNVFGHTTALCATN 1133


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