BLASTX nr result

ID: Coptis24_contig00019997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019997
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   363   4e-98
ref|XP_003613125.1| ABC transporter B family member [Medicago tr...   352   9e-95
emb|CBI18648.3| unnamed protein product [Vitis vinifera]              342   9e-92
ref|XP_003517500.1| PREDICTED: ABC transporter B family member 2...   342   1e-91
ref|XP_003519627.1| PREDICTED: ABC transporter B family member 2...   340   3e-91

>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Vitis vinifera]
          Length = 705

 Score =  363 bits (932), Expect = 4e-98
 Identities = 195/309 (63%), Positives = 228/309 (73%), Gaps = 9/309 (2%)
 Frame = -1

Query: 900 TNSHFQLYPCIST-----HIYKKPIQLKSAFFDEFSV-GSFDRGANDGIFENLKKWSVLV 739
           TN+    + C S      + +  P   KSA  + FSV  S   G+ +   E  K++  LV
Sbjct: 40  TNTKLPFFQCTSPPNCRLNSFSTP---KSASVNGFSVHNSNPEGSENDQVEFPKRFRELV 96

Query: 738 ---REIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXL 568
              R I  GGS+W+  +H   ++  KPVT + AL+RMW LVA DRW+I++         +
Sbjct: 97  HFIRSIWPGGSWWSLSDHADFIMTAKPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAV 156

Query: 567 SEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVKRM 388
           SEISIPH+LTASIFSAQSG  VVF  N  LL+ LCF SGICSGLRGCCF IANMILVKRM
Sbjct: 157 SEISIPHFLTASIFSAQSGEIVVFHRNVGLLVFLCFASGICSGLRGCCFGIANMILVKRM 216

Query: 387 REMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYL 208
           RE LYSALLFQDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL
Sbjct: 217 RETLYSALLFQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYL 276

Query: 207 FILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVRVY 28
            +LSWPL L T+ ICS L  IML YG+YQKKAA+L QEFTASANEV QETFSL+RTVRVY
Sbjct: 277 LVLSWPLGLCTMMICSTLLIIMLLYGRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVY 336

Query: 27  GTEIEELGR 1
           GTE +E+GR
Sbjct: 337 GTEEQEVGR 345


>ref|XP_003613125.1| ABC transporter B family member [Medicago truncatula]
           gi|355514460|gb|AES96083.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 712

 Score =  352 bits (903), Expect = 9e-95
 Identities = 187/311 (60%), Positives = 224/311 (72%), Gaps = 3/311 (0%)
 Frame = -1

Query: 924 QPIFPIHHTNSHFQLYPCISTHIYKKPIQLKSAFFDEFSVGSFDRGAN---DGIFENLKK 754
           QP+      N H   +   S+        +KS+  +E S+ +    A+   D   + ++K
Sbjct: 33  QPLITFSSVNRHH--FTLSSSKRILLSSSIKSSSINEVSIHNNSESASNASDEFLDRIRK 90

Query: 753 WSVLVREIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYSXXXXXXXX 574
               +  I  GG++WNF +  +V + N+PVT  +AL +MW+LVA DRWVI++        
Sbjct: 91  LVSFLPSIFPGGTWWNFSDDVEVSMFNQPVTVWYALGKMWNLVAKDRWVIFAAFSALIIA 150

Query: 573 XLSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSIANMILVK 394
            +SEISIPH+LTASIFSAQ G   VF GN RLLIL+C TSGICSG+RGC F IANMILVK
Sbjct: 151 AVSEISIPHFLTASIFSAQGGDIKVFHGNVRLLILMCVTSGICSGIRGCFFGIANMILVK 210

Query: 393 RMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNILQGTGALI 214
           RMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+ILRN+LQG G+LI
Sbjct: 211 RMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGGGSLI 270

Query: 213 YLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETFSLIRTVR 34
           YL ILSWPL L TL ICS+L+ +ML YG YQKKAARL QE TASAN V QETFSLIRTVR
Sbjct: 271 YLLILSWPLGLCTLVICSILAAVMLRYGWYQKKAARLIQEVTASANNVAQETFSLIRTVR 330

Query: 33  VYGTEIEELGR 1
           VYGTE EE GR
Sbjct: 331 VYGTEEEEHGR 341


>emb|CBI18648.3| unnamed protein product [Vitis vinifera]
          Length = 587

 Score =  342 bits (877), Expect = 9e-92
 Identities = 171/224 (76%), Positives = 190/224 (84%)
 Frame = -1

Query: 672 KPVTAVFALRRMWDLVANDRWVIYSXXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFK 493
           KPVT + AL+RMW LVA DRW+I++         +SEISIPH+LTASIFSAQSG  VVF 
Sbjct: 4   KPVTVLRALQRMWGLVAKDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVFH 63

Query: 492 GNARLLILLCFTSGICSGLRGCCFSIANMILVKRMREMLYSALLFQDISFFDSETVGDLT 313
            N  LL+ LCF SGICSGLRGCCF IANMILVKRMRE LYSALLFQDISFFD+ETVGDLT
Sbjct: 64  RNVGLLVFLCFASGICSGLRGCCFGIANMILVKRMRETLYSALLFQDISFFDNETVGDLT 123

Query: 312 SRLGSDCQQVSRVIGNDLNMILRNILQGTGALIYLFILSWPLALSTLAICSVLSTIMLFY 133
           SRLG+DCQQVSRVIGNDLN+ILRN+LQGTGALIYL +LSWPL L T+ ICS L  IML Y
Sbjct: 124 SRLGADCQQVSRVIGNDLNLILRNVLQGTGALIYLLVLSWPLGLCTMMICSTLLIIMLLY 183

Query: 132 GQYQKKAARLTQEFTASANEVTQETFSLIRTVRVYGTEIEELGR 1
           G+YQKKAA+L QEFTASANEV QETFSL+RTVRVYGTE +E+GR
Sbjct: 184 GRYQKKAAKLIQEFTASANEVAQETFSLMRTVRVYGTEEQEVGR 227


>ref|XP_003517500.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Glycine max]
          Length = 701

 Score =  342 bits (876), Expect = 1e-91
 Identities = 174/259 (67%), Positives = 201/259 (77%)
 Frame = -1

Query: 777 GIFENLKKWSVLVREIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYS 598
           G+ + ++KW   +  I  GG +W F     V V  +PVT   AL +MWDLVA DRWVI++
Sbjct: 84  GLLDRIRKWVGFLPSILPGGRWWEFSGDVDVQVVAQPVTVWRALGKMWDLVARDRWVIFA 143

Query: 597 XXXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFS 418
                    +SEISIPH+LTASIFSAQS    VF  N RLL+LLC  SGICSG+RGC F 
Sbjct: 144 AFSALIVAAVSEISIPHFLTASIFSAQSADLAVFHRNVRLLVLLCVASGICSGIRGCFFG 203

Query: 417 IANMILVKRMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNI 238
           IANMILVKRMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I+RN+
Sbjct: 204 IANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLIMRNV 263

Query: 237 LQGTGALIYLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQET 58
           LQG G+LIYL ILSWPL LSTL +CS+L+ +ML YG+YQKKAARL QE TASAN+V QE 
Sbjct: 264 LQGGGSLIYLLILSWPLGLSTLVVCSILAAVMLRYGRYQKKAARLIQEVTASANDVAQEM 323

Query: 57  FSLIRTVRVYGTEIEELGR 1
           FSLIRTVRVYGTE EE GR
Sbjct: 324 FSLIRTVRVYGTEEEEHGR 342


>ref|XP_003519627.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           isoform 1 [Glycine max]
          Length = 701

 Score =  340 bits (873), Expect = 3e-91
 Identities = 173/258 (67%), Positives = 201/258 (77%)
 Frame = -1

Query: 774 IFENLKKWSVLVREIGYGGSFWNFPEHQQVVVNNKPVTAVFALRRMWDLVANDRWVIYSX 595
           + E ++KW  ++  I  GG +W F     V V  +PVT   AL +MWDLVA DRWVI++ 
Sbjct: 85  LLERIRKWVGILPSILPGGRWWEFSGDVDVQVVAQPVTVWRALGKMWDLVAGDRWVIFAA 144

Query: 594 XXXXXXXXLSEISIPHYLTASIFSAQSGSSVVFKGNARLLILLCFTSGICSGLRGCCFSI 415
                   +SEISIPH LTASIFSAQS    V+  N RLL+LLC  SGICSG+RGC F I
Sbjct: 145 FSALIVAAISEISIPHLLTASIFSAQSADLTVYHRNVRLLVLLCVASGICSGIRGCFFGI 204

Query: 414 ANMILVKRMREMLYSALLFQDISFFDSETVGDLTSRLGSDCQQVSRVIGNDLNMILRNIL 235
           ANMILVKRMRE LYS+LL QDISFFD+ETVGDLTSRLG+DCQQVSRVIGNDLN+I+RN+L
Sbjct: 205 ANMILVKRMRETLYSSLLLQDISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLIMRNVL 264

Query: 234 QGTGALIYLFILSWPLALSTLAICSVLSTIMLFYGQYQKKAARLTQEFTASANEVTQETF 55
           QG G+LIYL ILSWPL LSTL +CS+L+ +ML YG+YQKKAARL QE TASAN+V QETF
Sbjct: 265 QGGGSLIYLLILSWPLGLSTLVVCSILAAVMLRYGRYQKKAARLIQEVTASANDVAQETF 324

Query: 54  SLIRTVRVYGTEIEELGR 1
           SL+RTVRVYGTE EE GR
Sbjct: 325 SLVRTVRVYGTEEEEHGR 342


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