BLASTX nr result
ID: Coptis24_contig00019991
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019991 (552 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31361.3| unnamed protein product [Vitis vinifera] 181 5e-44 ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase s... 181 5e-44 emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera] 181 5e-44 ref|XP_002526400.1| queuine tRNA-ribosyltransferase, putative [R... 171 5e-41 ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase s... 166 2e-39 >emb|CBI31361.3| unnamed protein product [Vitis vinifera] Length = 436 Score = 181 bits (460), Expect = 5e-44 Identities = 92/148 (62%), Positives = 111/148 (75%) Frame = -3 Query: 445 KFTVKALSNSSNGTGRARVGLLQLGNCPTPIETPSLLLSTRKALPVFIAXXXXXXXXXXX 266 KF V A S GRARVG+LQL NCP P+ETP+LLLSTRK LPVFI+ Sbjct: 2 KFAVTAWSK-----GRARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPD 56 Query: 265 XXXLQVSPLHFLEIFCLKSISSIGGLHKMVGLHKHCFVAAPRDSMLCLPVCESSNKFGAS 86 LQ+SPLHFL+ K+IS+IGGLH+M+GLH++ F A PRDS++CLP C+S+NK GAS Sbjct: 57 SHLLQMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGAS 116 Query: 85 FETPCGRRLIRPAEYMEMISSLKPNLWA 2 FETP GRRLI+P EYMEMISS+KP+LWA Sbjct: 117 FETPSGRRLIKPVEYMEMISSMKPSLWA 144 >ref|XP_002277122.1| PREDICTED: queuine tRNA-ribosyltransferase subunit QTRTD1 [Vitis vinifera] Length = 399 Score = 181 bits (460), Expect = 5e-44 Identities = 92/148 (62%), Positives = 111/148 (75%) Frame = -3 Query: 445 KFTVKALSNSSNGTGRARVGLLQLGNCPTPIETPSLLLSTRKALPVFIAXXXXXXXXXXX 266 KF V A S GRARVG+LQL NCP P+ETP+LLLSTRK LPVFI+ Sbjct: 2 KFAVTAWSK-----GRARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPD 56 Query: 265 XXXLQVSPLHFLEIFCLKSISSIGGLHKMVGLHKHCFVAAPRDSMLCLPVCESSNKFGAS 86 LQ+SPLHFL+ K+IS+IGGLH+M+GLH++ F A PRDS++CLP C+S+NK GAS Sbjct: 57 SHLLQMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGAS 116 Query: 85 FETPCGRRLIRPAEYMEMISSLKPNLWA 2 FETP GRRLI+P EYMEMISS+KP+LWA Sbjct: 117 FETPSGRRLIKPVEYMEMISSMKPSLWA 144 >emb|CAN82729.1| hypothetical protein VITISV_035707 [Vitis vinifera] Length = 383 Score = 181 bits (460), Expect = 5e-44 Identities = 92/148 (62%), Positives = 111/148 (75%) Frame = -3 Query: 445 KFTVKALSNSSNGTGRARVGLLQLGNCPTPIETPSLLLSTRKALPVFIAXXXXXXXXXXX 266 KF V A S GRARVG+LQL NCP P+ETP+LLLSTRK LPVFI+ Sbjct: 2 KFAVTAWSK-----GRARVGVLQLANCPQPMETPALLLSTRKGLPVFISPDLLPSLPSPD 56 Query: 265 XXXLQVSPLHFLEIFCLKSISSIGGLHKMVGLHKHCFVAAPRDSMLCLPVCESSNKFGAS 86 LQ+SPLHFL+ K+IS+IGGLH+M+GLH++ F A PRDS++CLP C+S+NK GAS Sbjct: 57 SHLLQMSPLHFLDGISSKTISNIGGLHQMLGLHEYGFAAVPRDSIVCLPECDSTNKIGAS 116 Query: 85 FETPCGRRLIRPAEYMEMISSLKPNLWA 2 FETP GRRLI+P EYMEMISS+KP+LWA Sbjct: 117 FETPSGRRLIKPVEYMEMISSMKPSLWA 144 >ref|XP_002526400.1| queuine tRNA-ribosyltransferase, putative [Ricinus communis] gi|223534262|gb|EEF35976.1| queuine tRNA-ribosyltransferase, putative [Ricinus communis] Length = 406 Score = 171 bits (434), Expect = 5e-41 Identities = 93/169 (55%), Positives = 113/169 (66%), Gaps = 5/169 (2%) Frame = -3 Query: 493 CDTGRAQKENNNKKRTKFTVKALSNSSNGTGRARVGLLQL-----GNCPTPIETPSLLLS 329 C G + + + K+ VKA SN+S +AR GLLQL + P IETP+LLLS Sbjct: 15 CIEGARKARESQTENMKWWVKAWSNNS----KARTGLLQLQLGSSNSSPIEIETPALLLS 70 Query: 328 TRKALPVFIAXXXXXXXXXXXXXXLQVSPLHFLEIFCLKSISSIGGLHKMVGLHKHCFVA 149 TRK LP FI+ LQ SPLHFLE K+IS IGGLH+MVGLH FVA Sbjct: 71 TRKGLPHFISPDLLPSLPYPHSALLQCSPLHFLEGVSRKTISHIGGLHQMVGLHDSAFVA 130 Query: 148 APRDSMLCLPVCESSNKFGASFETPCGRRLIRPAEYMEMISSLKPNLWA 2 PRDS+ CLP C S+NKFGASFETPCGRRLI+P+EY++MISS++PN+WA Sbjct: 131 VPRDSIQCLPECGSTNKFGASFETPCGRRLIKPSEYLQMISSIRPNIWA 179 >ref|XP_004138668.1| PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis sativus] gi|449490166|ref|XP_004158527.1| PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1-like [Cucumis sativus] Length = 399 Score = 166 bits (421), Expect = 2e-39 Identities = 87/148 (58%), Positives = 105/148 (70%) Frame = -3 Query: 445 KFTVKALSNSSNGTGRARVGLLQLGNCPTPIETPSLLLSTRKALPVFIAXXXXXXXXXXX 266 KF VKA SN G+AR G LQLGNCP I+TP+LLLSTRK LP FI+ Sbjct: 2 KFAVKAWSN-----GKARTGFLQLGNCPAAIDTPALLLSTRKGLPHFISPDLLPSLPSPD 56 Query: 265 XXXLQVSPLHFLEIFCLKSISSIGGLHKMVGLHKHCFVAAPRDSMLCLPVCESSNKFGAS 86 LQ SPLHFLE K+IS+IGGL ++GLH++ F A RDS+ LP C+++NKFGAS Sbjct: 57 SHLLQFSPLHFLEGPSSKTISNIGGLQHLLGLHEYGFAAVARDSVQSLPECDATNKFGAS 116 Query: 85 FETPCGRRLIRPAEYMEMISSLKPNLWA 2 FET CGRRLIRP EY+EMISS+KP++WA Sbjct: 117 FETTCGRRLIRPVEYIEMISSMKPDIWA 144