BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019988
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   248   1e-63
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   248   1e-63
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   246   5e-63
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   246   5e-63
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   244   2e-62

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score =  248 bits (633), Expect = 1e-63
 Identities = 130/225 (57%), Positives = 163/225 (72%), Gaps = 1/225 (0%)
 Frame = -2

Query: 672 SKQLASSFKDWFRTREDALL-NRIFEILXXXXXXXXXXXXDLPVSARTSELELSQLGLRL 496
           +K +  SFK WF++ ++ LL ++IF IL             LP     ++  L +L L L
Sbjct: 60  AKDVVLSFKQWFKSPQNILLMDQIFRILSD-----------LPPD--DADAALGRLRLPL 106

Query: 495 NEMFVLRVLKSGKDVLSCLKFFDWAGRQPGFYHTRATFHAIFKILSKQKLMSVMLDFLES 316
           +E FVL VL  G DVLSCLKFFDWAGRQPGF+HTRATFHA FKIL++ KLMS+MLDFL++
Sbjct: 107 SERFVLDVLAHGSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQN 166

Query: 315 YRMQKMSHRVRFYDTLVAGYAVAGKPGIALKLFGAMRFQGFDLGPFAYHVFLNALVEQSC 136
           Y   +  HRVRFYDTLV GYAVAGKP IAL+LF  MRFQG DL  FAYHV LNALVE++C
Sbjct: 167 YTELRYVHRVRFYDTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENC 226

Query: 135 FDVVEVVLKQIKLRGLENEVTSCIRVKNYCKQNKLSEAVFYLRRL 1
           FD   VV++QI++RGL+NE+T  I VKN+CKQ +L EA  ++ +L
Sbjct: 227 FDAFRVVVEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQL 271


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  248 bits (633), Expect = 1e-63
 Identities = 130/225 (57%), Positives = 163/225 (72%), Gaps = 1/225 (0%)
 Frame = -2

Query: 672 SKQLASSFKDWFRTREDALL-NRIFEILXXXXXXXXXXXXDLPVSARTSELELSQLGLRL 496
           +K +  SFK WF++ ++ LL ++IF IL             LP     ++  L +L L L
Sbjct: 60  AKDVVLSFKQWFKSPQNILLMDQIFRILSD-----------LPPD--DADAALGRLRLPL 106

Query: 495 NEMFVLRVLKSGKDVLSCLKFFDWAGRQPGFYHTRATFHAIFKILSKQKLMSVMLDFLES 316
           +E FVL VL  G DVLSCLKFFDWAGRQPGF+HTRATFHA FKIL++ KLMS+MLDFL++
Sbjct: 107 SERFVLDVLAHGSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQN 166

Query: 315 YRMQKMSHRVRFYDTLVAGYAVAGKPGIALKLFGAMRFQGFDLGPFAYHVFLNALVEQSC 136
           Y   +  HRVRFYDTLV GYAVAGKP IAL+LF  MRFQG DL  FAYHV LNALVE++C
Sbjct: 167 YTELRYVHRVRFYDTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENC 226

Query: 135 FDVVEVVLKQIKLRGLENEVTSCIRVKNYCKQNKLSEAVFYLRRL 1
           FD   VV++QI++RGL+NE+T  I VKN+CKQ +L EA  ++ +L
Sbjct: 227 FDAFRVVVEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQL 271


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  246 bits (627), Expect = 5e-63
 Identities = 127/225 (56%), Positives = 161/225 (71%), Gaps = 1/225 (0%)
 Frame = -2

Query: 672 SKQLASSFKDWFRTREDALLNRIFEILXXXXXXXXXXXXDLPVSARTSELELSQLGLRLN 493
           +K++ASSFK+WF++  + L  +IF+IL             +P     ++L LS+LGLRLN
Sbjct: 54  TKEVASSFKEWFKSGSNPLYGKIFQILRGARDDQE-----IPYRPSAADLALSRLGLRLN 108

Query: 492 EMFVLRVLKSG-KDVLSCLKFFDWAGRQPGFYHTRATFHAIFKILSKQKLMSVMLDFLES 316
           E FVL VL+ G KDVLSCLKFFDWAGRQ  F+HTRATF+AI KILSK KL+S+M DFLE+
Sbjct: 109 ESFVLDVLRFGSKDVLSCLKFFDWAGRQERFFHTRATFNAILKILSKAKLVSLMFDFLEN 168

Query: 315 YRMQKMSHRVRFYDTLVAGYAVAGKPGIALKLFGAMRFQGFDLGPFAYHVFLNALVEQSC 136
               K+ H   FY+ LV GYA AGKP  AL LFG MRFQG DL PF+YHV LN+LVE++C
Sbjct: 169 CVQHKLYHMPCFYNILVMGYAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENC 228

Query: 135 FDVVEVVLKQIKLRGLENEVTSCIRVKNYCKQNKLSEAVFYLRRL 1
           FD V V++KQI LRG  NE+T  + +K++CKQN+L EA  +L  L
Sbjct: 229 FDAVNVIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDL 273


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Cucumis sativus]
          Length = 913

 Score =  246 bits (627), Expect = 5e-63
 Identities = 127/225 (56%), Positives = 161/225 (71%), Gaps = 1/225 (0%)
 Frame = -2

Query: 672 SKQLASSFKDWFRTREDALLNRIFEILXXXXXXXXXXXXDLPVSARTSELELSQLGLRLN 493
           +K++ASSFK+WF++  + L  +IF+IL             +P     ++L LS+LGLRLN
Sbjct: 78  TKEVASSFKEWFKSGSNPLYGKIFQILRGARDDQE-----IPYRPSAADLALSRLGLRLN 132

Query: 492 EMFVLRVLKSG-KDVLSCLKFFDWAGRQPGFYHTRATFHAIFKILSKQKLMSVMLDFLES 316
           E FVL VL+ G KDVLSCLKFFDWAGRQ  F+HTRATF+AI KILSK KL+S+M DFLE+
Sbjct: 133 ESFVLDVLRFGSKDVLSCLKFFDWAGRQERFFHTRATFNAILKILSKAKLVSLMFDFLEN 192

Query: 315 YRMQKMSHRVRFYDTLVAGYAVAGKPGIALKLFGAMRFQGFDLGPFAYHVFLNALVEQSC 136
               K+ H   FY+ LV GYA AGKP  AL LFG MRFQG DL PF+YHV LN+LVE++C
Sbjct: 193 CVQHKLYHMPCFYNILVMGYAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENC 252

Query: 135 FDVVEVVLKQIKLRGLENEVTSCIRVKNYCKQNKLSEAVFYLRRL 1
           FD V V++KQI LRG  NE+T  + +K++CKQN+L EA  +L  L
Sbjct: 253 FDAVNVIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDL 297


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  244 bits (622), Expect = 2e-62
 Identities = 128/232 (55%), Positives = 156/232 (67%), Gaps = 6/232 (2%)
 Frame = -2

Query: 678 YDSKQLASSFKDWFRTREDALLNRIFEILXXXXXXXXXXXXDLPVSARTSELELSQLGLR 499
           Y  K +  SFK+WF+T+ +  L+R+FEIL                     EL LSQLGLR
Sbjct: 70  YTYKHVVQSFKEWFKTQNNGFLDRVFEILSNQD--------------EVDELALSQLGLR 115

Query: 498 LNEMFVLRVLKSG---KDVLSCLKFFDWAGRQPGFYHTRATFHAIFKILSKQKLMSVMLD 328
           L E  VL VL  G   KDVLSCLKFFDWAGRQ GFYHTRATFHAIFKILSK KLM +MLD
Sbjct: 116 LTESLVLDVLHYGNSKKDVLSCLKFFDWAGRQSGFYHTRATFHAIFKILSKAKLMQLMLD 175

Query: 327 FLESYRMQKMSHR---VRFYDTLVAGYAVAGKPGIALKLFGAMRFQGFDLGPFAYHVFLN 157
           FL++Y   + ++      FY TL+ GY+VAGKP +AL+LFG MRF G DL  FAYH+ LN
Sbjct: 176 FLDNYMKHRFANHKLGYGFYSTLIMGYSVAGKPQVALQLFGKMRFLGRDLDAFAYHILLN 235

Query: 156 ALVEQSCFDVVEVVLKQIKLRGLENEVTSCIRVKNYCKQNKLSEAVFYLRRL 1
           +LVE+ CFD V+ + KQI +RG E+ +T  I VK++CKQ  L EA  YLRR+
Sbjct: 236 SLVEECCFDAVDDIAKQISIRGFESHITHSIVVKSFCKQRMLDEAEAYLRRM 287