BLASTX nr result

ID: Coptis24_contig00019968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019968
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66733.1| hypothetical protein VITISV_032667 [Vitis vinifera]    66   3e-09
gb|ABA96323.2| transposon protein, putative, CACTA, En/Spm sub-c...    65   4e-09
emb|CAN62981.1| hypothetical protein VITISV_037893 [Vitis vinifera]    65   6e-09
gb|ABA97106.1| transposon protein, putative, CACTA, En/Spm sub-c...    65   7e-09
ref|XP_003635604.1| PREDICTED: uncharacterized protein LOC100852...    64   1e-08

>emb|CAN66733.1| hypothetical protein VITISV_032667 [Vitis vinifera]
          Length = 852

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = +3

Query: 24  EGSIVKAYITSECLTFYSIYLQDIETRFNCEERNYDGDHAKQHKGLQVFTQNVRPLGVPK 203
           EGSI +AYI +E L F S+YL  I TRFN  ERN D    +    L +F+Q  RPLG  +
Sbjct: 652 EGSIAEAYIVNEALMFCSMYLTRIGTRFNRSERNEDRFEDQVQGCLSIFSQQARPLGSRQ 711

Query: 204 IIELSSQEFNKARYYV 251
            ++ S +E  KA +Y+
Sbjct: 712 HLQFSKEELTKAHWYI 727


>gb|ABA96323.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 791

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/73 (45%), Positives = 44/73 (60%)
 Frame = +3

Query: 15  SHSEGSIVKAYITSECLTFYSIYLQDIETRFNCEERNYDGDHAKQHKGLQVFTQNVRPLG 194
           +H EGSI +AYI  EC TF S+YL  IETRFN EERNYDG+     +   +F+   R  G
Sbjct: 120 AHPEGSIAEAYIMKECSTFCSMYLNGIETRFNREERNYDGERQFADR-YSIFSSRFRAFG 178

Query: 195 VPKIIELSSQEFN 233
               + L+  ++N
Sbjct: 179 HKDDVILTQDQYN 191


>emb|CAN62981.1| hypothetical protein VITISV_037893 [Vitis vinifera]
          Length = 618

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/79 (43%), Positives = 49/79 (62%)
 Frame = +3

Query: 15  SHSEGSIVKAYITSECLTFYSIYLQDIETRFNCEERNYDGDHAKQHKGLQVFTQNVRPLG 194
           SH EGSIV+ YI  +C+TF S YL D+ET+ +CEERNY  ++   + GL +F      +G
Sbjct: 77  SHPEGSIVEGYIVEKCITFCSRYLHDVETKHDCEERNYVIENNITNGGLTIFKFMGCTIG 136

Query: 195 VPKIIELSSQEFNKARYYV 251
                 LS++E+ +A  YV
Sbjct: 137 KSTSHVLSTEEWFQAHLYV 155


>gb|ABA97106.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 414

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/73 (45%), Positives = 44/73 (60%)
 Frame = +3

Query: 15  SHSEGSIVKAYITSECLTFYSIYLQDIETRFNCEERNYDGDHAKQHKGLQVFTQNVRPLG 194
           +H EGSI +AYI  EC TF S+YL  IETRFN EERNYDG+  +      +F+   R  G
Sbjct: 76  AHPEGSIAEAYIMKECSTFCSMYLNGIETRFNREERNYDGER-QFADHYSIFSSRFRAFG 134

Query: 195 VPKIIELSSQEFN 233
               + L+  ++N
Sbjct: 135 HKNDVILTQDQYN 147


>ref|XP_003635604.1| PREDICTED: uncharacterized protein LOC100852669, partial [Vitis
           vinifera]
          Length = 886

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/75 (48%), Positives = 45/75 (60%)
 Frame = +3

Query: 15  SHSEGSIVKAYITSECLTFYSIYLQDIETRFNCEERNYDGDHAKQHKGLQVFTQNVRPLG 194
           ++ EGSI +AYI +E LTF S YL  IET+FN  +RN D D   Q  G  VF+Q  RP G
Sbjct: 529 AYPEGSIAEAYIVNESLTFCSQYLLGIETKFNRPDRNVD-DLNDQSNGFSVFSQRARPFG 587

Query: 195 VPKIIELSSQEFNKA 239
             + +E S  E  KA
Sbjct: 588 SYQQLEFSRAEIEKA 602


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