BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019957
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containi...    71   2e-10
emb|CBI28050.3| unnamed protein product [Vitis vinifera]               71   2e-10

>ref|XP_002280803.2| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 816

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
 Frame = -2

Query: 436 TLREKKYGFSRLRSRDERVGNKAKFSSV---VGEKVGKKYKRDAYVRKDVESRRSREMRS 266
           T +E   GFS   S+ ERVG K+  + V   V EK  K++ R+ Y +K ++SRR+    S
Sbjct: 5   TGKETGSGFSSYGSKGERVGRKSVKTHVGWAVEEKNEKRFTRERYSKKRLDSRRNGGTSS 64

Query: 265 GNSSLSSNDER-VEINYKKNEVRAVVDEKVTRVYKNSKVGNEKMDKKSNCSVGEGKMGKR 89
              SL S  +  V  + K NE                    E+  KK +      +M K 
Sbjct: 65  KFPSLKSESKNLVNKSLKANEKE------------------EEKSKKGDADKVREEMEKG 106

Query: 88  SRKKKVETPELLLRVGLDMCSKKGDFLGA 2
           S+K KV++ E LLRVGL+MCSK GD +GA
Sbjct: 107 SKKNKVDSQEGLLRVGLEMCSKNGDVMGA 135


>emb|CBI28050.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 54/149 (36%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
 Frame = -2

Query: 436 TLREKKYGFSRLRSRDERVGNKAKFSSV---VGEKVGKKYKRDAYVRKDVESRRSREMRS 266
           T +E   GFS   S+ ERVG K+  + V   V EK  K++ R+ Y +K ++SRR+    S
Sbjct: 5   TGKETGSGFSSYGSKGERVGRKSVKTHVGWAVEEKNEKRFTRERYSKKRLDSRRNGGTSS 64

Query: 265 GNSSLSSNDER-VEINYKKNEVRAVVDEKVTRVYKNSKVGNEKMDKKSNCSVGEGKMGKR 89
              SL S  +  V  + K NE                    E+  KK +      +M K 
Sbjct: 65  KFPSLKSESKNLVNKSLKANEKE------------------EEKSKKGDADKVREEMEKG 106

Query: 88  SRKKKVETPELLLRVGLDMCSKKGDFLGA 2
           S+K KV++ E LLRVGL+MCSK GD +GA
Sbjct: 107 SKKNKVDSQEGLLRVGLEMCSKNGDVMGA 135