BLASTX nr result

ID: Coptis24_contig00019953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019953
         (1639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516151.1| conserved hypothetical protein [Ricinus comm...   451   e-124
ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266...   448   e-123
ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|2...   417   e-114
ref|NP_001048296.1| Os02g0778500 [Oryza sativa Japonica Group] g...   379   e-102
ref|XP_003588954.1| hypothetical protein MTR_1g015700 [Medicago ...   372   e-100

>ref|XP_002516151.1| conserved hypothetical protein [Ricinus communis]
            gi|223544637|gb|EEF46153.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 428

 Score =  451 bits (1159), Expect = e-124
 Identities = 244/432 (56%), Positives = 296/432 (68%), Gaps = 26/432 (6%)
 Frame = +1

Query: 64   MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQ 243
            MRNNWLFFM+ D   P     EP  S    G L S     +DNS +QSR  Y+PGSLA Q
Sbjct: 1    MRNNWLFFMNPDDGSPNILPIEPLLSQSLRGPLFSP----LDNSLHQSRFLYIPGSLAFQ 56

Query: 244  QAYNRVSKFAGALL---------------SGKLQGSRHGGTFCV-----------QNFLG 345
            +  N +SK AGALL               SG  QG   G +               N +G
Sbjct: 57   EVLNCMSKLAGALLFWFTSTSSSSLSQQISGSQQGPGAGSSSQFTQVKNITLIRHNNLIG 116

Query: 346  LYCGSWSRVESAIPLFVGKIASSTMTHIWKELEQIQSFPVLSLAAALVPPFDSLSAKVLA 525
               GS S+ ES+  +  GKI+S  M  + +E E++QSFP LSLA ALVPPFD LS+KVLA
Sbjct: 117  FPIGSSSQSESSSHVVFGKISSFMMRILSREAERLQSFPFLSLATALVPPFDRLSSKVLA 176

Query: 526  MPLENSDVLVNSHMDQTHCIRRHQGSSELSLHEINWTRDAVEPVTGIEFPTVLDNISAGK 705
            +PLEN +V V+  +DQ  C   H G S LS  ++NW R AVEP TGIEFP +LD+I A +
Sbjct: 177  VPLENGEVQVHRSVDQMPCEVDHHGCSSLSFPDLNWRRQAVEPRTGIEFPMILDSILAAE 236

Query: 706  KNSTLRSEVLVGTGSKIMRIIKVKSLKLYAFGLYVQPDSICKKLGRKYASVPVGELSNQP 885
              S+L SEVLVGTGS+ M+IIK+KSLK+YAFG YV P+S+C+KLG KYASVP  EL+N  
Sbjct: 237  NKSSLSSEVLVGTGSRTMKIIKIKSLKVYAFGFYVHPNSVCEKLGPKYASVPAAELNNCR 296

Query: 886  EFFEDLLREDLDMTVRLVVNYKGLKISTVRDAFESSLRARLQKMNPEPDYHCLRTFGSCF 1065
            +F+EDLLRED+ MTVRLV+N  G+KI+TV+DAFE SLR RL K NP+ DY CLRTFGS F
Sbjct: 297  DFYEDLLREDIGMTVRLVINCNGMKINTVKDAFEKSLRNRLLKTNPDTDYSCLRTFGSFF 356

Query: 1066 SQDISLPPGTTINFQQTADGQLITEIGGKQIGAVHSKDLCRAFFGMYIGDAPVSVQAKEE 1245
            ++DI LP GTT++F++TADGQLITEIGG QIGAVHSKDLCRAFF MYIGD PVS Q KEE
Sbjct: 357  TKDIPLPAGTTVDFRRTADGQLITEIGGNQIGAVHSKDLCRAFFDMYIGDIPVSEQTKEE 416

Query: 1246 IARKVGSIIRRC 1281
            I + V S++RRC
Sbjct: 417  IGKNVASMMRRC 428


>ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266232 [Vitis vinifera]
            gi|296081726|emb|CBI20731.3| unnamed protein product
            [Vitis vinifera]
          Length = 422

 Score =  448 bits (1152), Expect = e-123
 Identities = 241/431 (55%), Positives = 296/431 (68%), Gaps = 25/431 (5%)
 Frame = +1

Query: 64   MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQ 243
            MRN WLFFMD DG  PY   P    S+ F GHLLSH +S VDNS Y SR  Y PGS ALQ
Sbjct: 1    MRNIWLFFMDFDGGSPY-IDPTESISNSFGGHLLSHVTSFVDNSVYGSRRIYAPGSAALQ 59

Query: 244  QAYNRVSKFAGALL----SGKLQGSRHGGT---------------------FCVQNFLGL 348
            +A++ +SKFAGA+L    SG     RH  +                      C  N  G 
Sbjct: 60   EAFDCISKFAGAVLLQLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDPTCSCKHNLTGF 119

Query: 349  YCGSWSRVESAIPLFVGKIASSTMTHIWKELEQIQSFPVLSLAAALVPPFDSLSAKVLAM 528
               S S+ +++  L   ++++ T+    +E++ ++S PV +LAAALVPP D+L+ KV+A+
Sbjct: 120  CFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNLTPKVMAV 179

Query: 529  PLENSDVLVNSHMDQTHCIRRHQGSSELSLHEINWTRDAVEPVTGIEFPTVLDNISAGKK 708
            PLE++ V          C   HQ SS  S  ++NWTR AVEP TGIEFPT+LDNI  G+ 
Sbjct: 180  PLEDTGV--------RSCEIEHQRSSHFSFPDLNWTRHAVEPRTGIEFPTILDNILVGEN 231

Query: 709  NSTLRSEVLVGTGSKIMRIIKVKSLKLYAFGLYVQPDSICKKLGRKYASVPVGELSNQPE 888
            NS+L SEVLVGTGS+ M+IIK+KSLK+YAFG YV P  IC+KLG KYAS+PV EL+ + +
Sbjct: 232  NSSLTSEVLVGTGSRTMKIIKIKSLKVYAFGFYVHPLLICEKLGPKYASIPVDELNKRQD 291

Query: 889  FFEDLLREDLDMTVRLVVNYKGLKISTVRDAFESSLRARLQKMNPEPDYHCLRTFGSCFS 1068
            F+EDLLRED++MTVRLVVN  G+KI+TVRDAFE SLR RL K NP+ DY CL TFGS F+
Sbjct: 292  FYEDLLREDINMTVRLVVNCNGMKINTVRDAFEKSLRNRLLKTNPDTDYQCLTTFGSYFT 351

Query: 1069 QDISLPPGTTINFQQTADGQLITEIGGKQIGAVHSKDLCRAFFGMYIGDAPVSVQAKEEI 1248
            QDI LP GTTI+F++TADGQLITEIGG+ IG VHSKDLCRAFF MYIGD PVS Q KEEI
Sbjct: 352  QDIPLPAGTTIDFRRTADGQLITEIGGRTIGVVHSKDLCRAFFDMYIGDVPVSHQTKEEI 411

Query: 1249 ARKVGSIIRRC 1281
             R V +IIRRC
Sbjct: 412  GRNVANIIRRC 422


>ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|222854494|gb|EEE92041.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  417 bits (1072), Expect = e-114
 Identities = 228/423 (53%), Positives = 284/423 (67%), Gaps = 25/423 (5%)
 Frame = +1

Query: 88   MDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLALQQAYNRVSK 267
            MDL+G   YTF  EP  S  F   L S  SS VDN  +QS   +VP ++A Q+A N VSK
Sbjct: 1    MDLNGESQYTFPLEPLLSQGFGAILFSQISSFVDNPLHQSGFLHVPETMAFQEALNHVSK 60

Query: 268  FAGALL---------------SGKLQGSRHGG----------TFCVQNFLGLYCGSWSRV 372
             AG L+               SG  +  R G           T    +  GL  GS S+ 
Sbjct: 61   LAGGLIFWFTSASSSNLSRQISGNQRSPRPGSCKSPAQVKNSTSTRHDLAGLGFGSISKG 120

Query: 373  ESAIPLFVGKIASSTMTHIWKELEQIQSFPVLSLAAALVPPFDSLSAKVLAMPLENSDVL 552
            ES+ P+   KI++  M  + +E E+ QSFPVLSLAAAL+PPF +LS+K+LA+P EN DV 
Sbjct: 121  ESSHPVVFSKISNFVMRLLHREAERRQSFPVLSLAAALIPPFGNLSSKLLAIPGENDDVP 180

Query: 553  VNSHMDQTHCIRRHQGSSELSLHEINWTRDAVEPVTGIEFPTVLDNISAGKKNSTLRSEV 732
            V++   Q  C     G   LS  ++NWTR AVEP TGIEFP +LD I AG+  S L SEV
Sbjct: 181  VHASTGQRPCEVERSGCPGLSFPDLNWTRHAVEPRTGIEFPMLLD-ILAGQNRSRLTSEV 239

Query: 733  LVGTGSKIMRIIKVKSLKLYAFGLYVQPDSICKKLGRKYASVPVGELSNQPEFFEDLLRE 912
            LV TGS+ M II++K+LK+YAFG YV P+S+CKKLG KYASVP+GEL+ + +F+EDLLRE
Sbjct: 240  LVATGSRTMTIIRIKTLKIYAFGFYVHPNSVCKKLGPKYASVPMGELNKRRDFYEDLLRE 299

Query: 913  DLDMTVRLVVNYKGLKISTVRDAFESSLRARLQKMNPEPDYHCLRTFGSCFSQDISLPPG 1092
            D+ MTVRLV+N  G+KI+TV+DAFE SLR RL K NP+ DY+CL TFGS F++D+ LP G
Sbjct: 300  DISMTVRLVINCNGIKINTVKDAFEKSLRNRLAKTNPDTDYNCLTTFGSFFTKDVPLPVG 359

Query: 1093 TTINFQQTADGQLITEIGGKQIGAVHSKDLCRAFFGMYIGDAPVSVQAKEEIARKVGSII 1272
            T ++F++TADGQLITEIGG QIGAV SKDLCRAFF MYIGD PVS Q KEEI + V  II
Sbjct: 360  TVVDFRRTADGQLITEIGGNQIGAVRSKDLCRAFFDMYIGDIPVSEQTKEEIGKNVACII 419

Query: 1273 RRC 1281
             +C
Sbjct: 420  GKC 422


>ref|NP_001048296.1| Os02g0778500 [Oryza sativa Japonica Group]
            gi|47497457|dbj|BAD19512.1| unknown protein [Oryza sativa
            Japonica Group] gi|113537827|dbj|BAF10210.1| Os02g0778500
            [Oryza sativa Japonica Group]
            gi|215741501|dbj|BAG97996.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 427

 Score =  379 bits (973), Expect = e-102
 Identities = 211/432 (48%), Positives = 276/432 (63%), Gaps = 26/432 (6%)
 Frame = +1

Query: 64   MRNNWLFFMDLD--GRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNSFYQSRHFYVPGSLA 237
            M+ +W  F   D  G   + F  +   SH     L+SHF ++V++SF   RH    G+ A
Sbjct: 1    MKPDWSIFSKFDHNGGYLHKFPIDSPISHDIGLGLISHFGTLVESSFQHPRHICSTGNGA 60

Query: 238  LQQAYNRVSKFAGALL----------------------SGKLQGSRHGGTFCVQNFLGLY 351
            +Q+A++  +KFAGA                        S   Q      T C+Q+  GL 
Sbjct: 61   VQEAFSCFNKFAGAFYFWLSRASNPKIFHRLSAIAGSSSRACQSQIKQVTSCMQHLAGLR 120

Query: 352  CGSWSRVESAIPLFVGKIASSTMTHIWKELEQIQSFPVLSLAAALVPPFDSLSAKVLA-- 525
             GS  R E AI + + K+A++T   +W E+E+  +  +L LAAA VPPF+++S K+LA  
Sbjct: 121  FGSQVREEHAIQILLAKLANATFGRLWNEVEERHACNILMLAAATVPPFENISPKMLADS 180

Query: 526  MPLENSDVLVNSHMDQTHCIRRHQGSSELSLHEINWTRDAVEPVTGIEFPTVLDNISAGK 705
            M L   +      +DQ      H G + +++  I    DA EP TGI+FPT+L++     
Sbjct: 181  MTLGRDNGRTREPVDQHSLEENHSGCTCVAVPRIILPEDATEPKTGIKFPTLLED----- 235

Query: 706  KNSTLRSEVLVGTGSKIMRIIKVKSLKLYAFGLYVQPDSICKKLGRKYASVPVGELSNQP 885
             NS   SEVLVG G + MRI++VK+L LYAFGLY+QPDSICK+L  KYASVPV EL + P
Sbjct: 236  -NSNPTSEVLVGMGFRSMRIMRVKNLNLYAFGLYIQPDSICKRLSPKYASVPVSELKDHP 294

Query: 886  EFFEDLLREDLDMTVRLVVNYKGLKISTVRDAFESSLRARLQKMNPEPDYHCLRTFGSCF 1065
            +F+EDLLRE++ MTVRL+V+Y GL I TVRDAFE SL  RLQKMNP  DYHCL+TFGS F
Sbjct: 295  DFYEDLLRENIHMTVRLIVSYNGLSIGTVRDAFEKSLCFRLQKMNPNTDYHCLKTFGSYF 354

Query: 1066 SQDISLPPGTTINFQQTADGQLITEIGGKQIGAVHSKDLCRAFFGMYIGDAPVSVQAKEE 1245
            S+DI +P GT I+F+QT+DGQLITEI GKQIGAV SKDLCRAFF MYIGD PVSV+ K++
Sbjct: 355  SEDICIPAGTKIDFRQTSDGQLITEIDGKQIGAVQSKDLCRAFFDMYIGDPPVSVETKQD 414

Query: 1246 IARKVGSIIRRC 1281
            IA+ VG +IRRC
Sbjct: 415  IAQNVGGLIRRC 426


>ref|XP_003588954.1| hypothetical protein MTR_1g015700 [Medicago truncatula]
            gi|355478002|gb|AES59205.1| hypothetical protein
            MTR_1g015700 [Medicago truncatula]
          Length = 403

 Score =  372 bits (956), Expect = e-100
 Identities = 214/429 (49%), Positives = 281/429 (65%), Gaps = 23/429 (5%)
 Frame = +1

Query: 64   MRNNWLFFMDLDGRCPYTFSPEPFSSHVFWGHLLSHFSSIVDNS--FYQSRHFYVPGSLA 237
            M+N+WL +MD D   P  F  EPF   +F+          +DNS  FY+S         A
Sbjct: 1    MKNDWLSWMDTD---PNLFPFEPF---LFF----------LDNSKTFYESS--------A 36

Query: 238  LQQAYNRVSKFAGALL---------SGKLQGSRHGG------------TFCVQNFLGLYC 354
            +++A+ RVSKFAGALL          G L+    GG            T  V    G   
Sbjct: 37   IEEAFGRVSKFAGALLFWFSGGGSGGGSLRFGGGGGFGNVNLKVKPVITNNVAPRFGFGF 96

Query: 355  GSWSRVESAIPLFVGKIASSTMTHIWKELEQIQSFPVLSLAAALVPPFDSLSAKVLAMPL 534
            GS  +    + L  GKI+S  +   W+E ++IQSFPVLSLAAALVPP  +LS+ +L+ P+
Sbjct: 97   GSKRKTCERVSL--GKISSFVVRLFWREAKRIQSFPVLSLAAALVPPIQNLSSNLLSGPM 154

Query: 535  ENSDVLVNSHMDQTHCIRRHQGSSELSLHEINWTRDAVEPVTGIEFPTVLDNISAGKKNS 714
            ++ DV ++  MDQ       +G   LS+ E++     VEP TGIEFP VLDN+SAG +NS
Sbjct: 155  QDPDVQMHGGMDQVPKDVERRGCPRLSISELSLANSTVEPKTGIEFPVVLDNLSAGDRNS 214

Query: 715  TLRSEVLVGTGSKIMRIIKVKSLKLYAFGLYVQPDSICKKLGRKYASVPVGELSNQPEFF 894
            +L SEVLVGTGSK M I+K+K+LK+YAFG YV P S+C+KLG KYAS+   EL+++ +F+
Sbjct: 215  SLGSEVLVGTGSKNMTIVKIKTLKVYAFGFYVHPYSLCEKLGPKYASISADELNDRNDFY 274

Query: 895  EDLLREDLDMTVRLVVNYKGLKISTVRDAFESSLRARLQKMNPEPDYHCLRTFGSCFSQD 1074
            +DLLRED++MTVRLVVN KG+KI++VRDAFE SLRARL K NP  D+ CL TFGS F+++
Sbjct: 275  QDLLREDINMTVRLVVNCKGMKINSVRDAFEKSLRARLVKTNPSADFDCLWTFGSYFTEN 334

Query: 1075 ISLPPGTTINFQQTADGQLITEIGGKQIGAVHSKDLCRAFFGMYIGDAPVSVQAKEEIAR 1254
            I +P GT I F++T DG+LITEIGG  +G+VHSKDLC+AFFGMYIGD PV  Q K+EI  
Sbjct: 335  IPIPLGTIIEFKRTVDGRLITEIGGNHVGSVHSKDLCQAFFGMYIGDVPVCEQTKKEIGT 394

Query: 1255 KVGSIIRRC 1281
             + +IIR C
Sbjct: 395  NIVNIIRNC 403


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